Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F28 I1 R1	183	98.6	3427438	96.9%	3321187	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,076,546	A→G	V304A (GTC→GCC)	yggP ←	putative zinc‑binding dehydrogenase YggP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,076,546	0	A	G	100.0%	324.9 / NA	87	V304A (GTC→GCC)	yggP	putative zinc‑binding dehydrogenase YggP
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (53/34); total (53/34)

CGCATCCAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGACGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACAAAAATGT  >  NC_000913/3076413‑3076678

cGCATCCAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACTGACGACGTGCGTGCTGTTGTAATGGGCGTTGt                                                                                                                                >  2:1510955/1‑140 (MQ=255)

cGCATCCAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGt                                                                                                                                >  2:56302/1‑140 (MQ=255)

  cATCCAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAg                                                                                                                              >  2:164743/1‑140 (MQ=255)

    tCCAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGaa                                                                                                                            >  1:1003928/1‑140 (MQ=255)

     ccAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGaaa                                                                                                                           <  1:1510955/140‑1 (MQ=255)

            aCCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACg                                                                                                                    <  2:1118604/140‑1 (MQ=255)

             ccGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACgg                                                                                                                   >  2:131494/1‑140 (MQ=255)

              cGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGc                                                                                                                  >  2:546043/1‑140 (MQ=255)

                 tatGAGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACt                                                                                                               <  2:1574251/140‑1 (MQ=255)

                    gggTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            <  1:944859/140‑1 (MQ=255)

                    gggTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            <  2:1003928/140‑1 (MQ=255)

                     ggTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            >  1:406322/1‑139 (MQ=255)

                     ggTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            <  2:406322/139‑1 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACg                                                                                                                    <  1:1342633/128‑1 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACg                                                                                                                    >  2:1342633/1‑128 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            <  1:142698/136‑1 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            >  2:142698/1‑136 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            >  2:592527/1‑136 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTg                                                                                                            <  1:592527/136‑1 (MQ=255)

                        cACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGt                                                                                                        >  1:1277371/1‑140 (MQ=255)

                           cATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGtttt                                                                                                     >  2:278263/1‑140 (MQ=255)

                               aaCGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGCTTTTATc                                                                                                 >  2:1006395/1‑140 (MQ=255)

                               aaCGACGGCTGTAACTGCCCAGT‑GCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATcc                                                                                                >  1:190113/1‑140 (MQ=255)

                                    cgGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCg                                                                                            >  2:994981/1‑140 (MQ=255)

                                     ggCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCTACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCgg                                                                                           <  2:1684099/140‑1 (MQ=255)

                                     ggCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCTACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCgg                                                                                           >  1:1684099/1‑140 (MQ=255)

                                     ggCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCgg                                                                                           >  1:1245606/1‑140 (MQ=255)

                                     ggCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCgg                                                                                           <  2:562068/140‑1 (MQ=255)

                                     ggCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCgg                                                                                           >  1:562068/1‑140 (MQ=255)

                                        tGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGccc                                                                                        <  2:516193/140‑1 (MQ=255)

                                           aaCTGCCCAGT‑GCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCa                                                                                    <  2:190113/140‑1 (MQ=255)

                                            aCTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCa                                                                                    <  2:140342/140‑1 (MQ=255)

                                               gCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAaag                                                                                 >  2:1656594/1‑140 (MQ=255)

                                                cccAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAaaga                                                                                >  1:1389257/1‑140 (MQ=255)

                                                     tGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTc                                                                           >  1:419407/1‑140 (MQ=255)

                                                        cgcTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGa                                                                        <  1:873398/140‑1 (MQ=255)

                                                          cTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGa                                                                        <  1:1257322/138‑1 (MQ=255)

                                                          cTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGa                                                                        >  2:1257322/1‑138 (MQ=255)

                                                          cTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACa                                                                      >  2:275575/1‑140 (MQ=255)

                                                          cTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACa                                                                      >  1:369497/1‑140 (MQ=255)

                                                          cTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACa                                                                      >  2:42719/1‑140 (MQ=255)

                                                               ggCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCAt                                                                 >  1:1623442/1‑140 (MQ=255)

                                                               ggCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCAt                                                                 >  2:1678720/1‑140 (MQ=255)

                                                                   aTCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTc                                                             >  2:259803/1‑140 (MQ=255)

                                                                   aTCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTc                                                             >  2:1459186/1‑140 (MQ=255)

                                                                   aTCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTc                                                             >  2:635595/1‑140 (MQ=255)

                                                                    tCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTcc                                                            <  2:652724/140‑1 (MQ=255)

                                                                    tCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTcc                                                            >  2:1624942/1‑140 (MQ=255)

                                                                      gCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGc                                                          <  1:1694362/140‑1 (MQ=255)

                                                                       ccTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGcc                                                         <  2:1277371/140‑1 (MQ=255)

                                                                          ctTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGt                                                      <  1:259803/140‑1 (MQ=255)

                                                                          ctTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGt                                                      >  1:406997/1‑140 (MQ=255)

                                                                           tttCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTa                                                     <  1:824555/140‑1 (MQ=255)

                                                                                   cgtcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATtcatca                                             <  1:164743/140‑1 (MQ=255)

                                                                                    gtcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATtca                                                >  1:1517397/1‑136 (MQ=255)

                                                                                    gtcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATtca                                                <  2:53018/136‑1 (MQ=255)

                                                                                    gtcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATtca                                                <  2:1517397/136‑1 (MQ=255)

                                                                                    gtcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATtca                                                >  1:53018/1‑136 (MQ=255)

                                                                                     tcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGc                                           >  2:32764/1‑140 (MQ=255)

                                                                                     tcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGc                                           >  2:1200195/1‑140 (MQ=255)

                                                                                     tcCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGc                                           >  1:447332/1‑140 (MQ=255)

                                                                                      ccGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGcc                                          <  1:131494/140‑1 (MQ=255)

                                                                                       cGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCa                                         >  2:831842/1‑140 (MQ=255)

                                                                                       cGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCa                                         >  2:1044606/1‑140 (MQ=255)

                                                                                             aCCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCaa                                   <  2:419407/140‑1 (MQ=255)

                                                                                              ccGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAAc                                  >  2:1144549/1‑140 (MQ=255)

                                                                                               cGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGCTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACg                                 <  1:1006395/140‑1 (MQ=255)

                                                                                                gCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGa                                <  1:635595/140‑1 (MQ=255)

                                                                                                gCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGa                                <  1:56910/140‑1 (MQ=255)

                                                                                                   aGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACg                                 <  2:1238490/136‑1 (MQ=255)

                                                                                                   aGATGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACg                                 >  1:1238490/1‑136 (MQ=255)

                                                                                                      tGTACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGAcagcag                          >  2:760225/1‑140 (MQ=255)

                                                                                                        tACCGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGc                        >  2:214989/1‑140 (MQ=255)

                                                                                                          ccGACGACGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCAc                      >  1:1553045/1‑140 (MQ=255)

                                                                                                            gacgacGTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCAccg                    <  1:214989/140‑1 (MQ=255)

                                                                                                              cgacgTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCAccgcc                  <  1:32764/140‑1 (MQ=255)

                                                                                                               gacgTGCGTGCTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCAccgccg                 >  2:1082940/1‑140 (MQ=255)

                                                                                                                  gtgcgtgcTGTTGTAATGGGCGTTGTAGAAATTAACCGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCAt              <  2:369497/140‑1 (MQ=255)

                                                                                                                  gtgcgtgcTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCTATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCAt              >  2:1490623/1‑140 (MQ=255)

                                                                                                                  gtgcgtgcTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCAt              >  2:370735/1‑140 (MQ=255)

                                                                                                                   tgcgtgcTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATa             <  1:1678720/140‑1 (MQ=255)

                                                                                                                   tgcgtgcTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATa             <  1:56302/140‑1 (MQ=255)

                                                                                                                       tgcTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACa         >  2:54360/1‑140 (MQ=255)

                                                                                                                       tgcTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACa         >  2:627665/1‑140 (MQ=255)

                                                                                                                         cTGTTGTAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACaaa       >  2:1267850/1‑140 (MQ=255)

                                                                                                                            ttgtAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACAAAAAt    >  2:792129/1‑140 (MQ=255)

                                                                                                                             tgtAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACAAAAATg   >  1:1218480/1‑140 (MQ=255)

                                                                                                                              gtAATGGGCGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACAAAAATGt  >  1:1304577/1‑140 (MQ=255)

CGCATCCAGGCCACCGATATGGGTCACCATAAACGACGGCTGTAACTGCCCAGTGGCGCTAAGGGCAATCGCCTCTTTCATGTCGTCCGTTGAACCGCCAGATGTACCGACGACGTGCGTGCTGTTGTAATGGACGTTGTAGAAATTAAACGGCACTTTGAAGTTTTTATCCGTCGGCCCGGCAAAGAAGTTCAGACAGCCATCTTCCGCCAGTAATTCATCAGCCATCTCAACGACAGCAGGCACCGCCGCATAAACAAAAATGT  >  NC_000913/3076413‑3076678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A