Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,096,970 |
+A |
coding (290/594 nt) |
rdgB → |
dITP/XTP pyrophosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,096,966 | 1 | . | A | 100.0%
| 280.8
/ NA
| 78 | Q96K (CAA→AAA) | rdgB | dITP/XTP pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (34/44); total (34/44) |
TGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATC‑AAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACG > NC_000913/3096835‑3097092
|
tGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATC‑aaaaagaa < 1:961080/140‑5 (MQ=255)
gcgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCaa > 1:1524209/1‑140 (MQ=255)
cgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCaaa > 2:603574/1‑140 (MQ=255)
cgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCaaa < 2:1381904/140‑1 (MQ=255)
gcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCaaaa > 1:1059949/1‑140 (MQ=255)
ggCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAActgctg > 2:856590/1‑140 (MQ=255)
ggCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAActgctg < 2:1315692/140‑1 (MQ=255)
cAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGa < 2:1043213/140‑1 (MQ=255)
aaaaGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGaa < 2:442794/140‑1 (MQ=255)
aaaGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGaaa < 2:1277206/140‑1 (MQ=255)
aGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACa < 1:499698/140‑1 (MQ=255)
aGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACa < 1:277851/140‑1 (MQ=255)
tGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAAt < 1:444089/140‑1 (MQ=255)
tGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAAt < 1:514851/140‑1 (MQ=255)
aCCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGa < 2:1059949/140‑1 (MQ=255)
aCCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGa > 2:190374/1‑140 (MQ=255)
ccGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGaa > 2:449232/1‑140 (MQ=255)
cGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGaaa < 2:1628528/140‑1 (MQ=255)
gCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAg < 2:551920/140‑1 (MQ=255)
gCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGaaa > 2:357191/1‑122 (MQ=255)
gCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGaaa < 1:357191/122‑1 (MQ=255)
cAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGga < 2:378216/140‑1 (MQ=255)
aTTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGgacg > 2:1490064/1‑140 (MQ=255)
aTTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGgacg > 2:1438811/1‑140 (MQ=255)
ccGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCa > 2:473045/1‑140 (MQ=255)
acgacTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACg > 2:1507984/1‑140 (MQ=255)
gacTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTc < 1:42493/140‑1 (MQ=255)
tctggtctggCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAgg < 2:907081/140‑1 (MQ=255)
tggtctggCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGgcg < 1:354880/140‑1 (MQ=255)
tggtctggCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGgcg < 1:1507984/140‑1 (MQ=255)
gtctggCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGcgcg > 2:1620159/1‑140 (MQ=255)
ggCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAACGAAAGACGTACCGGACGACCAACGTCAgg < 2:802229/132‑1 (MQ=255)
ggCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAACGAAAGACGTACCGGACGACCAACGTCAgg > 1:802229/1‑132 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCTCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 1:1397458/1‑140 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 1:368472/1‑140 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 2:570831/1‑140 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 1:1346355/1‑140 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 1:1543178/1‑140 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 2:1618361/1‑140 (MQ=255)
gCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTcc > 1:1696825/1‑140 (MQ=255)
cGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCa > 1:57258/1‑140 (MQ=255)
cGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCa < 1:449232/140‑1 (MQ=255)
gTAGATGTGCTTGGTGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACt < 1:141634/140‑1 (MQ=255)
gTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACt < 2:1346355/140‑1 (MQ=255)
gTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACt < 2:820952/140‑1 (MQ=255)
gTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACt < 1:1051030/140‑1 (MQ=255)
gTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACt < 1:510982/140‑1 (MQ=255)
gTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACt < 1:856590/140‑1 (MQ=255)
aGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACAGGACGACCAACGTCAGGCGCGTTTCCACTGc < 1:190374/140‑1 (MQ=255)
gATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCg < 1:603574/140‑1 (MQ=255)
aTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGt < 1:473045/140‑1 (MQ=255)
aTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGt < 2:871782/140‑1 (MQ=255)
aTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGt < 2:1635637/140‑1 (MQ=255)
aTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGt < 2:1543178/140‑1 (MQ=255)
aTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGt < 1:1151350/140‑1 (MQ=255)
aTGTGCTTGGAGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGt < 1:1172181/140‑1 (MQ=255)
tgCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGcgcg > 1:1199587/1‑125 (MQ=255)
tgCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGcgcg < 2:1199587/125‑1 (MQ=255)
tgCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCt > 2:386340/1‑140 (MQ=255)
tGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTgg > 1:1082324/1‑138 (MQ=255)
tGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTgg < 2:1082324/138‑1 (MQ=255)
ggcgCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGTAACAATGAAAGACGTACCAGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATc < 2:1524209/140‑1 (MQ=255)
cgcgcCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTg < 1:570831/140‑1 (MQ=255)
cgcgcCGGGCATTTACTCCGCGCGTTATTACGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTg > 1:761179/1‑140 (MQ=255)
ggCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCAcg < 2:1120060/140‑1 (MQ=255)
ggCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCAcg < 2:1696825/140‑1 (MQ=255)
tttACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGa < 1:1409531/140‑1 (MQ=255)
ccGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATcc < 1:1620159/140‑1 (MQ=255)
cgcgcgTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATccc > 1:1300211/1‑140 (MQ=255)
cgcgcgTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCAACTGCGAGCTGGCATATCTGCTTCACGCGGAAGATccc > 2:970566/1‑140 (MQ=255)
cgcgTTATTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCAc > 1:1655537/1‑140 (MQ=255)
aTTCCGGTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCt > 1:948323/1‑140 (MQ=255)
gTGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATg < 1:1326166/140‑1 (MQ=255)
tGAAGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGc > 1:690926/1‑140 (MQ=255)
aaGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGc < 1:986883/138‑1 (MQ=255)
aaGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGc > 2:986883/1‑138 (MQ=255)
aaGACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCa > 2:81977/1‑140 (MQ=255)
gACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACg > 2:861240/1‑140 (MQ=255)
gACGCGACCGATCAAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACg > 1:1027972/1‑140 (MQ=255)
|
TGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATC‑AAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACG > NC_000913/3096835‑3097092
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
