Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,221,621 |
C→T |
A52A (GCC→GCT) |
ebgR → |
DNA‑binding transcriptional repressor EbgR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,221,621 | 0 | C | T | 100.0%
| 430.5
/ NA
| 119 | A52A (GCC→GCT) | ebgR | DNA‑binding transcriptional repressor EbgR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (63/56); total (63/56) |
Only 100 of 120 total aligned reads displayed.
ATCGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCCCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTGGGC > NC_000913/3221484‑3221756
|
tCGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGt < 1:1390834/140‑1 (MQ=255)
cGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTa > 2:924400/1‑140 (MQ=255)
cGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTa < 2:1548027/140‑1 (MQ=255)
cGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTa > 2:1612492/1‑140 (MQ=255)
cGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTa < 1:950042/140‑1 (MQ=255)
tCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTc < 1:32437/140‑1 (MQ=255)
aGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGa < 2:1453310/140‑1 (MQ=255)
gCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGAc > 2:1234785/1‑140 (MQ=255)
gCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGAc > 2:1699046/1‑140 (MQ=255)
gCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGAc < 2:36844/140‑1 (MQ=255)
gCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGAc > 1:165987/1‑140 (MQ=255)
ggCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAgg < 1:894284/140‑1 (MQ=255)
tGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTcaac < 2:1461624/140‑1 (MQ=255)
ggCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTcaacc > 1:695500/1‑140 (MQ=255)
aGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACAcc > 2:110093/1‑140 (MQ=255)
gTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCa > 1:1105924/1‑140 (MQ=255)
cAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTc < 1:864126/140‑1 (MQ=255)
aGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACAcc > 2:544845/1‑133 (MQ=255)
aGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACAcc < 1:544845/133‑1 (MQ=255)
ggTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTgg > 2:859619/1‑140 (MQ=255)
ggTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTgg < 2:706186/140‑1 (MQ=255)
ggTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTgg > 1:243693/1‑140 (MQ=255)
ggTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTgg < 2:1691103/140‑1 (MQ=255)
gTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGc > 1:553600/1‑140 (MQ=255)
tCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCt < 2:243693/140‑1 (MQ=255)
tCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCt < 1:1699046/140‑1 (MQ=255)
cTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTa > 1:297662/1‑140 (MQ=255)
cTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTa > 1:1375357/1‑140 (MQ=255)
cTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTa > 2:472325/1‑140 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAGAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATc > 1:1493798/1‑140 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAacac > 2:121506/1‑125 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAacac < 1:121506/125‑1 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTgg < 1:1219555/135‑1 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATc > 2:1115529/1‑140 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATc > 1:1283267/1‑140 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATc > 2:357050/1‑140 (MQ=255)
tAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATc < 1:1580784/140‑1 (MQ=255)
aaTGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTa < 2:553600/140‑1 (MQ=255)
cGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCt < 1:1631157/140‑1 (MQ=255)
cGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcag > 1:813525/1‑140 (MQ=255)
gACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcagc < 1:598296/140‑1 (MQ=255)
gACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcagc < 2:541106/140‑1 (MQ=255)
aCATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcagca < 2:260050/140‑1 (MQ=255)
aCATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcagca < 2:1105924/140‑1 (MQ=255)
cATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcagcag > 2:645591/1‑140 (MQ=255)
cATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACcagcag < 1:1977/140‑1 (MQ=255)
aaTGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCt > 2:31482/1‑140 (MQ=255)
aaTGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCt > 2:179539/1‑140 (MQ=255)
aaTGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCt > 2:420037/1‑140 (MQ=255)
aaTGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCt > 1:1682536/1‑140 (MQ=255)
aTGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTg < 1:31482/140‑1 (MQ=255)
aTGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTg < 2:1493798/140‑1 (MQ=255)
tgAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGgag > 2:1440291/1‑140 (MQ=255)
tgAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGgag > 2:314521/1‑140 (MQ=255)
gAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGgaga > 1:371870/1‑140 (MQ=255)
gAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGgaga > 2:1478275/1‑140 (MQ=255)
aaaGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGAt > 2:791423/1‑140 (MQ=255)
gaagaGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCaa < 1:264973/140‑1 (MQ=255)
gaagaGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCaa < 2:1682536/140‑1 (MQ=255)
gaagaGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCaa < 1:1355759/140‑1 (MQ=255)
aagaGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAAc < 1:1234785/140‑1 (MQ=255)
agagACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTAAAGCTACCAGCAGGAGCTGGAGATCAACg < 1:924400/140‑1 (MQ=255)
agaCGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGAt > 2:1340378/1‑140 (MQ=255)
agaCGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGAt < 2:1153321/140‑1 (MQ=255)
gaCGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATc > 1:1018118/1‑140 (MQ=255)
gaCGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATc > 2:145494/1‑140 (MQ=255)
aCGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACg < 1:249507/136‑1 (MQ=255)
aaaCATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTa < 1:179539/140‑1 (MQ=255)
aaaCATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTa < 1:859619/140‑1 (MQ=255)
aCATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGa < 2:992626/132‑1 (MQ=255)
aCATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGa > 1:992626/1‑132 (MQ=255)
gCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTg > 1:947729/1‑140 (MQ=255)
gCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTg > 2:1235310/1‑140 (MQ=255)
tctcGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGa > 1:576388/1‑140 (MQ=255)
tctcGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATATACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGa > 1:108470/1‑140 (MQ=255)
tcGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATc < 1:1365656/140‑1 (MQ=255)
tcGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATc < 1:1612492/140‑1 (MQ=255)
tcGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTACTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATc > 1:572961/1‑140 (MQ=255)
agaTCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGc < 1:314521/140‑1 (MQ=255)
cGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACg < 2:584978/140‑1 (MQ=255)
gCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACgg < 2:1473564/140‑1 (MQ=255)
gCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACgg < 1:638070/140‑1 (MQ=255)
gCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACgg < 2:1283267/140‑1 (MQ=255)
gCCGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACgg < 2:297662/140‑1 (MQ=255)
cGAAAAGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCa > 2:471967/1‑140 (MQ=255)
aaaaGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCa < 1:771137/133‑1 (MQ=255)
aaaaGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCa > 2:771137/1‑133 (MQ=255)
aaaaGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCAtt < 2:386123/140‑1 (MQ=255)
aaaaGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCAtt > 2:928215/1‑140 (MQ=255)
aaGCTGGAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGa > 1:862485/1‑140 (MQ=255)
gAGTACAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCa < 2:879793/140‑1 (MQ=255)
cAAGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCg > 2:694640/1‑140 (MQ=255)
aaGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGa > 1:872230/1‑140 (MQ=255)
aGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGaa < 1:1235310/140‑1 (MQ=255)
aGACCAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGaa < 1:1003010/140‑1 (MQ=255)
cAGTAGTGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGc > 2:521949/1‑140 (MQ=255)
gtagtGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTg > 2:1321872/1‑140 (MQ=255)
gtagtGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTg > 2:1382469/1‑140 (MQ=255)
gtagtGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTg > 1:1150538/1‑140 (MQ=255)
gtGCTCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTGGGc > 1:846681/1‑140 (MQ=255)
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ATCGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCCCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTGGGC > NC_000913/3221484‑3221756
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
