Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,271,805 |
T→C |
intergenic (‑35/+62) |
garK ← / ← garR |
glycerate 2‑kinase 1/tartronate semialdehyde reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,271,805 | 0 | T | C | 100.0%
| 293.1
/ NA
| 78 | intergenic (‑35/+62) | garK/garR | glycerate 2‑kinase 1/tartronate semialdehyde reductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (46/32); total (46/32) |
CATCAGGAAAAATTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGTTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGTTCCTA > NC_000913/3271671‑3271937
|
cATCAGGAAAAATTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTtctc > 1:1166232/1‑140 (MQ=255)
tCAGGAAAAATTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCtt > 2:897856/1‑140 (MQ=255)
cAGGAAAAATTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTa > 2:636180/1‑140 (MQ=255)
ggAAAAATTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTAtt > 1:1077387/1‑140 (MQ=255)
aaaaTTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGAATACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCgg > 2:784059/1‑140 (MQ=255)
aaTTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGcc > 1:888831/1‑140 (MQ=255)
aaTTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGcc < 2:1268166/140‑1 (MQ=255)
tttCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTg < 1:169243/140‑1 (MQ=255)
tttCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTg < 2:1301691/140‑1 (MQ=255)
tttCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTg < 2:1570496/140‑1 (MQ=255)
tCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGc < 2:1166232/140‑1 (MQ=255)
tCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGc < 1:855930/140‑1 (MQ=255)
tttttCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCg < 2:1277269/140‑1 (MQ=255)
aTCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGAt < 2:497704/136‑1 (MQ=255)
aTCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGAt > 1:497704/1‑136 (MQ=255)
aTCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCa > 2:486264/1‑140 (MQ=255)
cGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAAt > 1:482022/1‑140 (MQ=255)
gCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATa < 2:482022/140‑1 (MQ=255)
ccTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATAc > 2:99699/1‑140 (MQ=255)
cTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACg < 1:636180/140‑1 (MQ=255)
cgcAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCa > 1:1419377/1‑140 (MQ=255)
cgcAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCa > 1:479510/1‑140 (MQ=255)
cAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATc < 1:802358/140‑1 (MQ=255)
ccTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCgg > 2:922324/1‑140 (MQ=255)
cTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCggg > 2:268374/1‑140 (MQ=255)
tCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGc < 1:486264/140‑1 (MQ=255)
gCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCac < 2:888831/140‑1 (MQ=255)
cTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCacg > 2:112086/1‑140 (MQ=255)
aGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTc > 2:303205/1‑140 (MQ=255)
ttctttATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAg < 1:112086/140‑1 (MQ=255)
ttctttATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAg < 1:303817/140‑1 (MQ=255)
agTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACt > 2:1698921/1‑140 (MQ=255)
agTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACt > 1:1010623/1‑140 (MQ=255)
tGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCg > 2:899528/1‑140 (MQ=255)
gATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGtt > 1:1235676/1‑140 (MQ=255)
aTTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGttt > 1:1521743/1‑140 (MQ=255)
aTTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGttt > 1:1469382/1‑140 (MQ=255)
cGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCg < 1:899528/140‑1 (MQ=255)
ccTATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGc > 1:582181/1‑140 (MQ=255)
tATGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCa < 1:99699/140‑1 (MQ=255)
tGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCgt > 1:1237693/1‑126 (MQ=255)
tGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCgt < 2:1237693/126‑1 (MQ=255)
tGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAgg > 2:761299/1‑140 (MQ=255)
tGCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAgg > 1:1659496/1‑140 (MQ=255)
gCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAggg < 1:1698921/140‑1 (MQ=255)
gCCTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAggg > 1:96238/1‑140 (MQ=255)
cTGTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGgcg < 2:479510/140‑1 (MQ=255)
gTTACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCAAGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCt < 1:151691/140‑1 (MQ=255)
ttACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTa > 2:1224505/1‑140 (MQ=255)
ttACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTa > 2:725347/1‑140 (MQ=255)
ttACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTa > 2:820509/1‑140 (MQ=255)
tACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTAt > 2:253778/1‑140 (MQ=255)
tACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTAt > 2:321837/1‑140 (MQ=255)
tACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTAt > 2:1187451/1‑140 (MQ=255)
tACCACATGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTAt > 1:1356009/1‑140 (MQ=255)
aTGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccg > 2:1185853/1‑140 (MQ=255)
aTGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccg > 2:1306158/1‑140 (MQ=255)
aTGACGCCGGAGGGCGCTTCTCTAATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccg > 2:1454060/1‑140 (MQ=255)
tGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgc < 2:1469382/140‑1 (MQ=255)
tGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgc < 1:761299/140‑1 (MQ=255)
tGACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgc < 1:1185853/140‑1 (MQ=255)
tGACGCCGGAGGGCGCTTCTCTAATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgc < 1:1454060/140‑1 (MQ=255)
tGACGCCGGAGGGCGCTACTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgc < 2:1521743/140‑1 (MQ=255)
ggccGCCGGGGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAATTTTTCGTAGTAGCGCGCCAGGGCGCTATGATccgc < 2:1704316/137‑1 (MQ=255)
gACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgcc > 2:1169242/1‑140 (MQ=255)
gACGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgcc < 1:321837/140‑1 (MQ=255)
aCGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAgg < 2:1203673/124‑1 (MQ=255)
aCGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAgg > 1:1203673/1‑124 (MQ=255)
aCGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATccgccg > 1:1327522/1‑140 (MQ=255)
cGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGt > 1:1324764/1‑140 (MQ=255)
cGCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTCCAATACGCCATCCGGGCACGACGCCATTAACGAGAAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTTTGATCCGCCGt > 2:461746/1‑140 (MQ=255)
gCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGtt < 1:75172/140‑1 (MQ=255)
gCCGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGtt > 1:1318962/1‑140 (MQ=255)
ccGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGa > 2:697211/1‑130 (MQ=255)
ccGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGa < 1:697211/130‑1 (MQ=255)
cGGAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGTTcc > 1:276424/1‑140 (MQ=255)
gAGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGTTCCTa < 2:96238/140‑1 (MQ=255)
aGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGTTCCTa < 1:1155502/139‑1 (MQ=255)
aGGGCGCTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGTTCCTa > 2:1155502/1‑139 (MQ=255)
|
CATCAGGAAAAATTTCCCGAAATCCTTTTTCTATCGCCTGCGCAACCTCGCTGGCAGATAAACTTTCTTTATAAGAGTCTGGGGCGATTACGATTTTCATACCTATGCCTGTTACCACATGACGCCGGAGGGCGTTTCTCTTATTCGGCCTGGATTCCAGGCCCGGATTGCAATACGCCATCCGGGCACGACGTCATTAACGAGTAACTTCGACTTTCGCCAGTTTTTCGTAGTAGCACGCCAGGGCGCTATGATCCGCCGTTCCTA > NC_000913/3271671‑3271937
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
