Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,445,549 |
A→G |
T480A (ACC→GCC) |
tamB → |
translocation and assembly module subunit TamB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,445,549 | 0 | A | G | 100.0%
| 370.0
/ NA
| 100 | T480A (ACC→GCC) | tamB | translocation and assembly module subunit TamB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (43/57); total (43/57) |
Only 100 of 103 total aligned reads displayed.
TTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAA > NC_000913/4445414‑4445685
|
ttGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGTCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTg < 1:923729/140‑1 (MQ=255)
cTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATgg > 1:1406186/1‑140 (MQ=255)
tGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGa < 2:140063/140‑1 (MQ=255)
aaCAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTg > 2:970301/1‑140 (MQ=255)
aCAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGc < 2:645964/140‑1 (MQ=255)
aCAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGc > 1:751030/1‑140 (MQ=255)
cAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGcc < 2:429211/140‑1 (MQ=255)
cAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGcc < 2:1142137/140‑1 (MQ=255)
cAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGcc < 2:1381814/140‑1 (MQ=255)
cAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCAGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGcc < 1:270457/140‑1 (MQ=255)
gCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCACGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGa > 1:681622/1‑140 (MQ=255)
aTTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGtt > 1:901854/1‑140 (MQ=255)
tAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGa > 1:186823/1‑140 (MQ=255)
gTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAg < 2:901854/140‑1 (MQ=255)
gTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAg < 1:970301/140‑1 (MQ=255)
gTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAg > 2:227695/1‑140 (MQ=255)
gTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTCGAAg < 1:1388315/140‑1 (MQ=255)
tGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑Ct < 2:1145633/140‑1 (MQ=255)
ggCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTg > 1:1383808/1‑140 (MQ=255)
ggCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTg < 1:414005/140‑1 (MQ=255)
cgcgGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGAc < 1:1162029/140‑1 (MQ=255)
cgcgGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGAc < 1:1347604/140‑1 (MQ=255)
ggTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCgg < 2:306414/140‑1 (MQ=255)
gTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGt < 2:172614/140‑1 (MQ=255)
gTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGt > 1:152470/1‑140 (MQ=255)
tGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTa > 1:1149116/1‑140 (MQ=255)
gCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACg < 2:751030/140‑1 (MQ=255)
cGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTaaa < 2:186823/140‑1 (MQ=255)
cTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACa > 2:1350712/1‑140 (MQ=255)
cTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACa > 1:1568863/1‑140 (MQ=255)
tAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGa > 2:841939/1‑140 (MQ=255)
aaCGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGaa < 2:1383808/140‑1 (MQ=255)
aCGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAAc > 1:547003/1‑140 (MQ=255)
aCGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAAc < 2:1406186/140‑1 (MQ=255)
aTTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGt > 2:500642/1‑140 (MQ=255)
gCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGa > 1:1486955/1‑140 (MQ=255)
gCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGa > 1:1330868/1‑140 (MQ=255)
ccAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑c > 2:198154/1‑140 (MQ=255)
ccAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑c > 2:1400247/1‑140 (MQ=255)
ccAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑c > 2:968685/1‑140 (MQ=255)
aaaGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑Cgg < 2:547003/140‑1 (MQ=255)
aaGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGc > 2:100087/1‑140 (MQ=255)
agagTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCa < 1:1350712/140‑1 (MQ=255)
ttCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCt > 2:949906/1‑140 (MQ=255)
tCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTg < 2:152470/140‑1 (MQ=255)
cccGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑Cgg > 1:1265871/1‑132 (MQ=255)
cccGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑Cgg < 2:1265871/132‑1 (MQ=255)
cccGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGa > 1:705345/1‑140 (MQ=255)
cccGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGa < 2:1330868/140‑1 (MQ=255)
ccGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGaa > 1:686960/1‑140 (MQ=255)
cGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGaaa < 1:100087/140‑1 (MQ=255)
cGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGaaa < 2:1691650/140‑1 (MQ=255)
ggACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGaaa > 1:496761/1‑139 (MQ=255)
ggACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGaaa < 2:496761/139‑1 (MQ=255)
aCTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGc < 2:373112/140‑1 (MQ=255)
aCTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGc < 1:500642/140‑1 (MQ=255)
aCTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGc < 1:653492/140‑1 (MQ=255)
aCTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGc < 2:705345/140‑1 (MQ=255)
aCTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGc < 2:654935/140‑1 (MQ=255)
cTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCa < 2:37439/140‑1 (MQ=255)
tGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCaa < 1:987354/140‑1 (MQ=255)
tGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCaa < 2:1486955/140‑1 (MQ=255)
tGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCaa < 1:968685/140‑1 (MQ=255)
tGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCaa < 2:235020/140‑1 (MQ=255)
tGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCaa < 2:1149116/140‑1 (MQ=255)
ggCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAAc > 1:972541/1‑140 (MQ=255)
cGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTtat < 2:447616/140‑1 (MQ=255)
gAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTtata > 2:792989/1‑140 (MQ=255)
gAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTtata < 2:686960/140‑1 (MQ=255)
aaCTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATg < 2:1568863/140‑1 (MQ=255)
cTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAgg < 2:861859/125‑1 (MQ=255)
cTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAgg > 1:861859/1‑125 (MQ=255)
tGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGga > 2:392276/1‑140 (MQ=255)
tGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGga > 2:849104/1‑140 (MQ=255)
ggCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGgat < 1:949906/140‑1 (MQ=255)
ggCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGgat < 2:1552489/140‑1 (MQ=255)
ggCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTACATGCAGTGgat < 1:1400247/140‑1 (MQ=255)
cTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTGACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGgatga > 2:1270619/1‑140 (MQ=255)
cTTGATTAAAACCCGCGGTAGCCTGGACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGACAACAGTTATATGCAGTGgatga > 2:1132678/1‑140 (MQ=255)
tGATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATc < 1:392276/140‑1 (MQ=255)
gATTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATcc > 2:1521700/1‑140 (MQ=255)
aTTAAAACCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATccc < 1:1521700/140‑1 (MQ=255)
aaaaCCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAgg < 1:849104/140‑1 (MQ=255)
aaCCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGc < 2:351092/140‑1 (MQ=255)
aaCCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGc < 1:792989/140‑1 (MQ=255)
aCCCGCGGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCt > 2:559402/1‑140 (MQ=255)
gcgGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCAt > 2:485126/1‑140 (MQ=255)
cgGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATc > 2:360218/1‑140 (MQ=255)
cgGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATc > 2:1189169/1‑140 (MQ=255)
cgGTAGCCTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATc > 2:1488243/1‑140 (MQ=255)
cccggaccggcggCCCCTGGAGGATGG‑CGGGCCGGAGGTGGAGCCTGA‑CGGTAACGGTAAACCGAACAAAGTGAACGTTGACCGGCA‑GCTTAAAAGGCACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAAc < 2:681622/133‑1 (MQ=255)
ccTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAAc < 1:1317958/140‑1 (MQ=255)
ccTGTACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAAc < 1:276813/140‑1 (MQ=255)
tACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCgg > 1:1436/1‑140 (MQ=255)
tACGGCGGCGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCgg > 1:1300180/1‑140 (MQ=255)
gcggcgCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCa < 1:188949/140‑1 (MQ=255)
cggcGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCaa > 2:333771/1‑140 (MQ=255)
cggcGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCaa > 2:1218839/1‑140 (MQ=255)
ggcGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCaaa < 1:198154/140‑1 (MQ=255)
ggcGCCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCaaa < 2:27617/140‑1 (MQ=255)
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TTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTGGCAGATGGACGTGCCGGAGTTGAAG‑CTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGA‑CGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAA > NC_000913/4445414‑4445685
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
