Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,561,358 |
A→G |
R143R (AGA→AGG) |
kptA → |
RNA 2'‑phosphotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,561,358 | 0 | A | G | 100.0%
| 446.8
/ NA
| 119 | R143R (AGA→AGG) | kptA | RNA 2'‑phosphotransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (69/50); total (69/50) |
Only 100 of 119 total aligned reads displayed.
ACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTT > NC_000913/4561223‑4561493
|
acCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACg < 1:1353006/140‑1 (MQ=255)
ccGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACgg > 2:908209/1‑140 (MQ=255)
aGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCg < 1:30852/140‑1 (MQ=255)
aGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCg < 2:934125/140‑1 (MQ=255)
aCGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAAcc > 1:1373770/1‑140 (MQ=255)
ggTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAAc < 1:398814/137‑1 (MQ=255)
ggTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAAc > 2:398814/1‑137 (MQ=255)
ggTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGt < 1:1353227/140‑1 (MQ=255)
tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTaa > 1:324130/1‑134 (MQ=255)
tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTaa < 2:324130/134‑1 (MQ=255)
tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCa < 1:262215/140‑1 (MQ=255)
tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCa > 1:23731/1‑140 (MQ=255)
tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCa > 1:444016/1‑140 (MQ=255)
tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCa > 1:1196144/1‑140 (MQ=255)
cGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCaaa > 1:997601/1‑140 (MQ=255)
aGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGcaca < 1:1083502/140‑1 (MQ=255)
aGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGcaca > 2:1149529/1‑140 (MQ=255)
gCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAg > 1:143441/1‑140 (MQ=255)
gCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAg > 1:477182/1‑140 (MQ=255)
ccGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAgg < 2:801890/140‑1 (MQ=255)
ccGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAgg > 2:849631/1‑140 (MQ=255)
cGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCATGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGa > 2:666885/1‑140 (MQ=255)
gTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGaa < 1:1135870/140‑1 (MQ=255)
gTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGaa < 2:143441/140‑1 (MQ=255)
gACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGaa > 1:859098/1‑140 (MQ=255)
gACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGaa > 2:367181/1‑140 (MQ=255)
aCGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGaaa < 2:23731/140‑1 (MQ=255)
gagaTAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACg < 2:752526/140‑1 (MQ=255)
gagaTAAAAAAACAGGGGCTCATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACg > 1:1119026/1‑140 (MQ=255)
agaTAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGa < 1:457499/140‑1 (MQ=255)
aTAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAgg > 2:380767/1‑140 (MQ=255)
aTAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAgg > 2:253872/1‑140 (MQ=255)
aaaaaaaCAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGcc < 2:1196144/140‑1 (MQ=255)
aaaaaaaCAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGcc < 1:1494306/140‑1 (MQ=255)
aaaaaaCAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATG‑AGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTc < 2:949989/140‑1 (MQ=255)
aGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCttt > 2:581062/1‑139 (MQ=255)
aGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCttt < 1:581062/139‑1 (MQ=255)
ggggCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCt > 2:1645832/1‑140 (MQ=255)
aTTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGc > 1:104149/1‑140 (MQ=255)
ttGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCg > 2:800524/1‑140 (MQ=255)
aGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACggg > 1:1483944/1‑140 (MQ=255)
aGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACggg > 1:405183/1‑140 (MQ=255)
cGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGt > 2:712759/1‑140 (MQ=255)
cGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGt > 1:1684175/1‑140 (MQ=255)
gTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTc < 2:1261458/140‑1 (MQ=255)
aCGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTg < 2:1373770/140‑1 (MQ=255)
aCGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTg < 1:1645832/140‑1 (MQ=255)
cGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGa > 1:512970/1‑140 (MQ=255)
tACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACa > 2:361995/1‑140 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATTGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCa > 1:880362/1‑140 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGAc > 1:551539/1‑136 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGAc > 1:548640/1‑136 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGAc < 2:551539/136‑1 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGAc < 2:548640/136‑1 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCa > 2:621756/1‑140 (MQ=255)
aTCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCa > 1:1091644/1‑140 (MQ=255)
ctctctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGt < 1:409531/125‑1 (MQ=255)
ctctctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGt > 2:409531/1‑125 (MQ=255)
ctctctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAc > 1:1570082/1‑140 (MQ=255)
ctctctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAc > 1:1528960/1‑140 (MQ=255)
ctctctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAc > 2:1453997/1‑140 (MQ=255)
tctctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcg > 2:558894/1‑140 (MQ=255)
tctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggt > 1:971644/1‑140 (MQ=255)
tctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggt > 2:514643/1‑140 (MQ=255)
tctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggt > 1:155487/1‑140 (MQ=255)
tctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggt > 1:1636155/1‑140 (MQ=255)
tctGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggt > 1:1001966/1‑140 (MQ=255)
ctgctgATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTgta > 1:1173553/1‑128 (MQ=255)
ctgctgATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGAc < 2:1173553/130‑1 (MQ=255)
tgctgATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttg > 1:1093401/1‑140 (MQ=255)
tgctgATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttg > 1:1328138/1‑140 (MQ=255)
tgctgATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttg > 1:457042/1‑140 (MQ=255)
tgctgATGAAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttg > 1:572385/1‑140 (MQ=255)
tgatgaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcgg > 2:983422/1‑140 (MQ=255)
gatgaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcggt < 1:271306/140‑1 (MQ=255)
atgaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcggtt > 2:1305875/1‑140 (MQ=255)
atgaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcggtt > 1:1537428/1‑140 (MQ=255)
atgaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcggtt > 2:309111/1‑140 (MQ=255)
gaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGa < 2:912315/140‑1 (MQ=255)
gaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGa < 2:477182/140‑1 (MQ=255)
gaAGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGa > 2:1284003/1‑140 (MQ=255)
aaGCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcggttg < 1:431379/138‑1 (MQ=255)
gCAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGtt > 2:1006096/1‑140 (MQ=255)
cAACGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGttt < 1:177334/140‑1 (MQ=255)
cGGCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCtt > 2:969492/1‑140 (MQ=255)
ggCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTg < 2:292161/140‑1 (MQ=255)
ggCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTg < 2:611029/140‑1 (MQ=255)
gCACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGa < 1:380767/140‑1 (MQ=255)
cACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAg < 2:1483944/140‑1 (MQ=255)
cACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAg < 2:971644/140‑1 (MQ=255)
cACGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAg < 1:666885/140‑1 (MQ=255)
cGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTg > 1:476251/1‑140 (MQ=255)
cGCAAAGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTg < 1:1214632/140‑1 (MQ=255)
aGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGt < 2:1233461/137‑1 (MQ=255)
aGTGGGAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGt > 1:1233461/1‑137 (MQ=255)
gggAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGa < 2:155487/140‑1 (MQ=255)
gAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGaaa > 1:975167/1‑140 (MQ=255)
gAGCAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGaaa > 1:1621907/1‑140 (MQ=255)
cAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACtt < 2:104149/140‑1 (MQ=255)
cAAGGCACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACtt < 2:1416644/140‑1 (MQ=255)
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ACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTT > NC_000913/4561223‑4561493
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
