Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,630,406 |
A→C |
G39G (GGT→GGG) |
ettA ← |
energy‑dependent translational throttle protein EttA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,630,406 | 0 | A | C | 100.0%
| 432.3
/ NA
| 114 | G39G (GGT→GGG) | ettA | energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (61/53); total (61/53) |
Only 100 of 117 total aligned reads displayed.
GTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATG > NC_000913/4630269‑4630541
|
gtgtgtTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGccc > 2:710005/1‑140 (MQ=255)
tgtgtTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGcccc > 1:1155347/1‑140 (MQ=255)
tgtgtTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTATATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGcccc > 1:420483/1‑140 (MQ=255)
tgtccggggTTCGGCTGCGGTTCCTGCGGCAGATACCCATTCTTGATGTCTGGCGGCGGCCGCGCTTCACCTTCGATGTCTTTATAAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAg < 2:159178/134‑1 (MQ=255)
gtTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACAAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAgg > 2:817921/1‑140 (MQ=255)
gTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑aa > 1:805741/1‑140 (MQ=255)
gTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑aa > 2:1499389/1‑140 (MQ=255)
gTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑aa > 1:1181160/1‑140 (MQ=255)
gTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑aa > 1:227921/1‑140 (MQ=255)
gTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑aa > 1:141829/1‑140 (MQ=255)
tCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AAtt > 1:940775/1‑140 (MQ=255)
tttCCTGGGGCAGATAACCATTTTTGTTGTCGGGCTGCGGCCGCGCTTCACTTTCGATTTTTATATCAAGGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCa < 2:420483/139‑1 (MQ=255)
aGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACt > 2:1144108/1‑140 (MQ=255)
aTAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCa > 2:593244/1‑140 (MQ=255)
aTAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCa > 2:1001385/1‑140 (MQ=255)
aTAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCa > 2:230976/1‑140 (MQ=255)
tCTTGATGTCTGGCTGGGGACGCGCTTCACCTTGGATGTTTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATg < 2:770946/140‑1 (MQ=255)
ttGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATg < 1:1399249/138‑1 (MQ=255)
ttGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATg > 2:1399249/1‑138 (MQ=255)
ttGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGtt > 2:1671990/1‑140 (MQ=255)
gATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGtttt > 1:1565754/1‑140 (MQ=255)
aTGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGttttt > 1:1225644/1‑140 (MQ=255)
tGTCTGGCTGCGGACGCGCTTCCCCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTc < 1:974110/140‑1 (MQ=255)
gTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCa < 1:1618441/140‑1 (MQ=255)
tGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCaaaa > 1:726065/1‑140 (MQ=255)
cGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCACTCAGCCCCAGGACACCAAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGa > 1:1617668/1‑140 (MQ=255)
gACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGt > 2:218717/1‑140 (MQ=255)
gACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGt > 2:474159/1‑140 (MQ=255)
gcTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTcgg < 1:622894/140‑1 (MQ=255)
tCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTcggcgg < 1:890446/140‑1 (MQ=255)
aTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACttt > 1:418040/1‑140 (MQ=255)
aTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACttt > 1:1111117/1‑140 (MQ=255)
aTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACttt > 2:1253781/1‑140 (MQ=255)
aTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACttt > 1:1524379/1‑140 (MQ=255)
cTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCg > 1:1129950/1‑140 (MQ=255)
tttATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAATAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGa < 2:897909/140‑1 (MQ=255)
tttATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGa > 2:1470645/1‑140 (MQ=255)
ttATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGac < 1:817921/140‑1 (MQ=255)
taccAACGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca < 1:989849/137‑1 (MQ=255)
aTCAATGCCCGCCATAATGCGCAGCAGGGTGTACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGacac > 2:725327/1‑140 (MQ=255)
aTCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca < 2:896786/139‑1 (MQ=255)
aTCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca > 1:896786/1‑139 (MQ=255)
aTCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCACTCAGCCCCAGGACACCAAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca < 2:1617668/140‑1 (MQ=255)
tCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACg < 2:1225644/140‑1 (MQ=255)
tCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACg < 1:844057/140‑1 (MQ=255)
tGCCCGCTATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 1:534231/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 2:1336244/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 2:930947/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc < 2:1155347/140‑1 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 2:1392922/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 2:1399440/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 1:181051/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc > 2:469142/1‑140 (MQ=255)
tGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGc < 1:1144108/140‑1 (MQ=255)
gCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 2:141829/140‑1 (MQ=255)
gCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 2:181051/140‑1 (MQ=255)
gCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 2:726065/140‑1 (MQ=255)
gCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 1:1080306/140‑1 (MQ=255)
gCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 1:1614674/140‑1 (MQ=255)
gCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 1:1336244/140‑1 (MQ=255)
ccccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 2:635757/139‑1 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca > 1:1502743/1‑132 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGaca < 2:1502743/132‑1 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 2:596691/139‑1 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa > 1:596691/1‑139 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa > 1:944733/1‑139 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa < 2:944733/139‑1 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCAt > 1:505912/1‑140 (MQ=255)
cccGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCAt > 1:1006916/1‑140 (MQ=255)
cGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATgg > 2:529753/1‑140 (MQ=255)
cATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGtat > 1:862813/1‑140 (MQ=255)
tAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATaa < 1:1499389/140‑1 (MQ=255)
tAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATaa < 2:1641823/140‑1 (MQ=255)
aaTGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATaaa < 1:1253781/140‑1 (MQ=255)
cgcAGCAGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCa > 2:534876/1‑127 (MQ=255)
gcagcaGGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAAt < 1:1671990/140‑1 (MQ=255)
cagGGTGTACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg < 1:725327/140‑1 (MQ=255)
cagGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg > 2:1348884/1‑140 (MQ=255)
cagGGTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAg < 1:529753/140‑1 (MQ=255)
ggTGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCa > 2:1123582/1‑140 (MQ=255)
tGGACTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACg > 2:1518884/1‑140 (MQ=255)
aCTTACCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTg > 2:485028/1‑140 (MQ=255)
aCCCGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACt < 2:940775/140‑1 (MQ=255)
cccGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGt < 1:229113/133‑1 (MQ=255)
cccGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACtt < 1:1313824/140‑1 (MQ=255)
cccGCGCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACtt > 1:561901/1‑140 (MQ=255)
cgcgCCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCg < 1:1399440/140‑1 (MQ=255)
cgcCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATGTGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGcc > 2:1554307/1‑140 (MQ=255)
cgcCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGcc > 2:1241035/1‑140 (MQ=255)
cgcCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGcc > 2:1442597/1‑140 (MQ=255)
cgcCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGcc < 1:1470660/140‑1 (MQ=255)
cgcCATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGcc > 1:600973/1‑140 (MQ=255)
ccATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctc < 2:600973/140‑1 (MQ=255)
ccATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctc < 1:218717/140‑1 (MQ=255)
ccATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctc < 1:474159/140‑1 (MQ=255)
ccATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctc < 1:206663/140‑1 (MQ=255)
cATTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCAGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCctct < 1:1442597/140‑1 (MQ=255)
aTTCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTa < 2:298691/140‑1 (MQ=255)
ttCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTAt > 1:1192749/1‑140 (MQ=255)
tCAGCCCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATg < 2:561901/140‑1 (MQ=255)
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GTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACC‑AATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATG > NC_000913/4630269‑4630541
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
