Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F28 I1 R1 258 142.3 4824480 99.1% 4781059 138.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,923,469 T→C T80A (ACC→GCC)  yebY ← DUF2511 domain‑containing protein YebY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,923,4690TC100.0% 340.5 / NA 95T80A (ACC→GCC) yebYDUF2511 domain‑containing protein YebY
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (44/51);  total (44/51)

TATTGGAAATCAAAAGGCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGTCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGCCCATTTGTCT  >  NC_000913/1923335‑1923605
                                                                                                                                      |                                                                                                                                        
tATTGGAAATCAAAAGGCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTcc                                                                                                                                     >  1:1156840/1‑140 (MQ=255)
    ggAAATCAAAAGGCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACt                                                                                                                                 >  1:1750753/1‑140 (MQ=255)
    ggAAATCAAAAGGCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGACTGTTAGGATCATCAATCTGACTCACCGAAATGCGTTGGGCATTGGACTTCCCAcc                                                                                                                                 >  2:1367144/1‑139 (MQ=255)
      aaaTCAAAAGGCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTgg                                                                                                                               <  1:2060670/140‑1 (MQ=255)
                gCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCtt                                                                                                                     <  2:1505642/140‑1 (MQ=255)
                gCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCtt                                                                                                                     <  1:1631231/140‑1 (MQ=255)
                   aTTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTtg                                                                                                                  >  2:1715519/1‑140 (MQ=255)
                   aTTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTtg                                                                                                                  >  2:1055178/1‑140 (MQ=255)
                   aTTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTtg                                                                                                                  <  2:1014789/140‑1 (MQ=255)
                    ttttAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTtgt                                                                                                                 >  2:936721/1‑140 (MQ=255)
                     tttAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTtgtg                                                                                                                <  1:587277/140‑1 (MQ=255)
                     tttAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTtgtg                                                                                                                <  1:936721/140‑1 (MQ=255)
                         ggTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGat                                                                                                            <  2:2206069/140‑1 (MQ=255)
                          gTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGata                                                                                                           <  1:1377701/140‑1 (MQ=255)
                          gTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGata                                                                                                           >  2:1377701/1‑140 (MQ=255)
                          gTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGata                                                                                                           >  1:1731793/1‑140 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATTAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGt                                                                                                       >  2:1719784/1‑140 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATGTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGt                                                                                                       >  2:1917911/1‑140 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGata                                                                                                           >  1:1127807/1‑136 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGata                                                                                                           <  2:1127807/136‑1 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGt                                                                                                       >  1:74003/1‑140 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGt                                                                                                       >  1:119881/1‑140 (MQ=255)
                              ttAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGt                                                                                                       >  1:544156/1‑140 (MQ=255)
                                 aCAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTa                                                                                                    <  1:2318915/140‑1 (MQ=255)
                                   agagTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTaaa                                                                                                  >  1:672787/1‑140 (MQ=255)
                                      gTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGa                                                                                               <  2:1156840/140‑1 (MQ=255)
                                      gTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGa                                                                                               <  2:2188990/140‑1 (MQ=255)
                                      gTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGa                                                                                               <  1:355989/140‑1 (MQ=255)
                                             aGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCATCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCa                                                                                        <  2:1677568/140‑1 (MQ=255)
                                             aGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCa                                                                                        <  1:302405/140‑1 (MQ=255)
                                             aGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCa                                                                                        <  2:1136197/140‑1 (MQ=255)
                                             aGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCa                                                                                        <  1:1715519/140‑1 (MQ=255)
                                             aGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCa                                                                                        <  2:2292598/140‑1 (MQ=255)
                                               cTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCTATATCGTTTAAAGGATACTGCACg                                                                                      >  1:2095773/1‑140 (MQ=255)
                                               cTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACg                                                                                      >  1:763167/1‑140 (MQ=255)
                                                 cGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGa                                                                                               <  1:2137606/129‑1 (MQ=255)
                                                 cGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGa                                                                                               >  2:2137606/1‑129 (MQ=255)
                                                  gTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAgg                                                                                   <  1:1055178/140‑1 (MQ=255)
                                                       ataAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACt                                                                              <  1:16779/140‑1 (MQ=255)
                                                       ataAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACt                                                                              <  2:659717/140‑1 (MQ=255)
                                                        taAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTc                                                                             <  2:1353416/140‑1 (MQ=255)
                                                            cGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         <  1:399438/140‑1 (MQ=255)
                                                            cGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         <  2:1731793/140‑1 (MQ=255)
                                                            cGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         <  2:119881/140‑1 (MQ=255)
                                                            cGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         <  1:1541971/140‑1 (MQ=255)
                                                            cGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         <  2:560148/140‑1 (MQ=255)
                                                             ggTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACt                                                                              <  2:313043/134‑1 (MQ=255)
                                                             ggTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACt                                                                              >  1:313043/1‑134 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACt                                                                              <  1:1485801/133‑1 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACt                                                                              >  2:1485801/1‑133 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         <  2:2168015/138‑1 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGAt                                                                         >  1:2168015/1‑138 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATta                                                                       >  1:1796748/1‑140 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATta                                                                       >  2:1278430/1‑140 (MQ=255)
                                                              gTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATta                                                                       >  1:405483/1‑140 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTc                                                                             >  2:439912/1‑132 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTc                                                                             <  1:439912/132‑1 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATtaat                                                                     >  2:1889271/1‑140 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATtaat                                                                     >  2:1220831/1‑140 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATtaat                                                                     <  1:1736206/140‑1 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATtaa                                                                      <  2:1851060/139‑1 (MQ=255)
                                                                gCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATtaa                                                                      >  1:1851060/1‑139 (MQ=255)
                                                                 ccAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATtaata                                                                    <  1:1889271/140‑1 (MQ=255)
                                                                     aCTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACAt                                                                >  1:1848999/1‑140 (MQ=255)
                                                                      cTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATa                                                               >  1:2036083/1‑140 (MQ=255)
                                                                        cATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACa                                                             <  2:405483/140‑1 (MQ=255)
                                                                        cATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACa                                                             <  2:462373/140‑1 (MQ=255)
                                                                         aTTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACaa                                                            >  1:1708259/1‑140 (MQ=255)
                                                                         aTTTTTACGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACaa                                                            >  2:720109/1‑140 (MQ=255)
                                                                           tttttCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAg                                                          >  2:1416791/1‑140 (MQ=255)
                                                                                       aTTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTc                                              <  2:2145637/140‑1 (MQ=255)
                                                                                           ttAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGc                                           <  2:1513941/139‑1 (MQ=255)
                                                                                           ttAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGc                                           >  1:1513941/1‑139 (MQ=255)
                                                                                             aGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAg                                        <  1:1917911/140‑1 (MQ=255)
                                                                                               gATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAACGCATTACCCGGTCGGCAAGTc                                      <  2:1708259/140‑1 (MQ=255)
                                                                                               gATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTc                                      <  2:672787/140‑1 (MQ=255)
                                                                                                 tcatcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAg                                        <  2:1395255/136‑1 (MQ=255)
                                                                                                 tcatcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAg                                        >  1:1395255/1‑136 (MQ=255)
                                                                                                  catcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGc                                   >  1:1321431/1‑140 (MQ=255)
                                                                                                   atcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGc                                   >  1:1434276/1‑139 (MQ=255)
                                                                                                   atcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGc                                   <  2:1434276/139‑1 (MQ=255)
                                                                                                   atcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCa                                  >  1:1027198/1‑140 (MQ=255)
                                                                                                   atcaATCTGAATCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAAGAACATACAAAGCATTACCCGGTCGGCAAGTCAGCa                                  >  2:1660864/1‑140 (MQ=255)
                                                                                                             aTCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTc                        <  2:1750753/140‑1 (MQ=255)
                                                                                                             aTCACCGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTc                        >  1:1123871/1‑140 (MQ=255)
                                                                                                                  cGAAATGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGAt                   >  1:1168270/1‑140 (MQ=255)
                                                                                                                      aTGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTaaa               >  2:1039960/1‑140 (MQ=255)
                                                                                                                      aTGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTaaa               >  1:1692149/1‑140 (MQ=255)
                                                                                                                       tGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAAc              <  2:1692149/140‑1 (MQ=255)
                                                                                                                       tGGGTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAAc              <  2:1123871/140‑1 (MQ=255)
                                                                                                                         ggTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGc            >  1:2399652/1‑140 (MQ=255)
                                                                                                                          gTTGGGCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGcc           <  1:1209610/140‑1 (MQ=255)
                                                                                                                              ggCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGCCCAtt       >  2:560625/1‑140 (MQ=255)
                                                                                                                              ggCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGCCCAtt       <  1:1660864/140‑1 (MQ=255)
                                                                                                                              ggCATTGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGCCCAtt       <  2:796424/140‑1 (MQ=255)
                                                                                                                                   tGGCCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGCCCATTTGTCt  <  2:279216/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                        
TATTGGAAATCAAAAGGCTATTTTAGGTAATTAACAGAGTTTTTCAGCTCGTTCTATAAACGGTGCCAGACTCATTTTTTCGCCGGGATTGTTAGGATCATCAATCTGAATCACCGAAATGGGTTGGGCATTGGTCTTCCCACTGGCAACTTCCTTTTGTGCGATATCGTTTAAAGGATACTGCACGAGGGTACTCGGATTAATAACATACAAAGCATTACCCGGTCGGCAAGTCAGCATCACCTCTTCGCGATTAAACGCCCATTTGTCT  >  NC_000913/1923335‑1923605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A