Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,936,414 |
T→C |
intergenic (‑100/‑238) |
zwf ← / → yebK |
NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase/DNA‑binding transcriptional repressor YebK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,936,414 | 0 | T | C | 100.0%
| 494.1
/ NA
| 137 | intergenic (‑100/‑238) | zwf/yebK | NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase/DNA‑binding transcriptional repressor YebK |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (78/59); total (78/59) |
Only 100 of 137 total aligned reads displayed.
CCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATC > NC_000913/1936278‑1936548
|
ccAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCaaa < 1:2250041/140‑1 (MQ=255)
cAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAAc < 1:1652668/140‑1 (MQ=255)
aGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACg < 2:884388/140‑1 (MQ=255)
ccTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCAcc < 2:350822/140‑1 (MQ=255)
cTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCAccc < 2:1024437/140‑1 (MQ=255)
tGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCaaa > 1:246487/1‑126 (MQ=255)
gTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGAt < 1:529862/140‑1 (MQ=255)
tttGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGAtt > 1:1840169/1‑140 (MQ=255)
tttGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGAtt > 1:934024/1‑140 (MQ=255)
tttGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGAtt > 1:439266/1‑140 (MQ=255)
ttGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTa < 2:1840169/140‑1 (MQ=255)
tGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTAc > 2:449688/1‑140 (MQ=255)
ttACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGAATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATACACCCGTGCGATTACGGGa > 2:1572954/1‑140 (MQ=255)
aCCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGaaa > 2:406553/1‑140 (MQ=255)
tGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAgcgcgc > 2:1574798/1‑140 (MQ=255)
aTTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAg < 1:1040930/140‑1 (MQ=255)
tAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCa < 1:1725796/129‑1 (MQ=255)
tAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCa > 2:1725796/1‑129 (MQ=255)
tAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCaa > 1:1203320/1‑140 (MQ=255)
tAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCaa > 1:2290212/1‑140 (MQ=255)
tAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCaa > 1:1802687/1‑140 (MQ=255)
aaGTTAACTAACCCGGCACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCaaa > 1:703696/1‑140 (MQ=255)
aactaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCa > 2:1659508/1‑123 (MQ=255)
aactaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCa < 1:1659508/123‑1 (MQ=255)
aactaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGa > 1:1186201/1‑140 (MQ=255)
actaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCaa > 1:507975/1‑123 (MQ=255)
actaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCaa < 2:507975/123‑1 (MQ=255)
ctaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCaa < 2:1441148/132‑1 (MQ=255)
ctaacCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCaa > 1:1441148/1‑132 (MQ=255)
ctaacCCGGTACTTAAGCCAGGGGATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATa > 2:499013/1‑140 (MQ=255)
acCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATaaaa > 2:1744170/1‑140 (MQ=255)
acCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATaaaa > 2:1025098/1‑140 (MQ=255)
cccGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATaaaaa > 2:1858571/1‑140 (MQ=255)
ccGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATaaaaaa > 1:952648/1‑140 (MQ=255)
cGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATaaaaaaa < 1:1574798/140‑1 (MQ=255)
gTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAatc > 2:1372708/1‑140 (MQ=255)
tACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAatca > 2:2083308/1‑140 (MQ=255)
ttAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCg > 2:897540/1‑140 (MQ=255)
cAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTcc > 2:847300/1‑140 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 1:927643/140‑1 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 1:847300/140‑1 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 1:759550/140‑1 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa > 2:2316820/1‑140 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa > 1:1962194/1‑140 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 1:1888624/140‑1 (MQ=255)
aGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 2:1962194/140‑1 (MQ=255)
ggTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCAtt > 1:471936/1‑140 (MQ=255)
ggTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCAtt > 1:2243601/1‑140 (MQ=255)
ggTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATAGTTTTCCAtt < 2:439266/140‑1 (MQ=255)
ggTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGAT‑AAAAAATCATCGTTTTCCATTg > 1:1123720/1‑140 (MQ=255)
taCTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGt < 1:704009/140‑1 (MQ=255)
aCTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 2:2351800/133‑1 (MQ=255)
aCTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa > 1:2351800/1‑133 (MQ=255)
aCTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCa < 2:1947328/133‑1 (MQ=255)
cTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaa < 1:504784/140‑1 (MQ=255)
cTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaa < 1:406553/140‑1 (MQ=255)
cTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaa > 2:272275/1‑140 (MQ=255)
cTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaa < 2:1434483/140‑1 (MQ=255)
cTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaa < 1:2048975/140‑1 (MQ=255)
gTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaaaaa > 2:235965/1‑140 (MQ=255)
tAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAt > 1:2337432/1‑140 (MQ=255)
tAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAt > 2:73919/1‑140 (MQ=255)
tttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 2:1186201/140‑1 (MQ=255)
tttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAAATGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 2:2243601/140‑1 (MQ=255)
ttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGac < 1:1025098/140‑1 (MQ=255)
ttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGac < 1:1744170/140‑1 (MQ=255)
tCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGaca < 1:1858571/140‑1 (MQ=255)
tCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGaca < 2:934024/140‑1 (MQ=255)
tCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGaca > 1:1968075/1‑140 (MQ=255)
tCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGaca < 2:1198732/140‑1 (MQ=255)
tCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCC‑CCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGacac > 2:208284/1‑140 (MQ=255)
cTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGacac > 2:710454/1‑140 (MQ=255)
cTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGacac < 2:952648/140‑1 (MQ=255)
ttACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACt < 1:1572954/140‑1 (MQ=255)
tACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTg < 1:1372708/140‑1 (MQ=255)
aCGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGAT‑AAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGAt < 2:1123720/140‑1 (MQ=255)
gTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCa > 2:659289/1‑140 (MQ=255)
tGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt > 1:1039021/1‑140 (MQ=255)
tGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt > 1:323896/1‑140 (MQ=255)
aCTGTACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGtt < 2:323896/140‑1 (MQ=255)
tACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGa > 1:563074/1‑140 (MQ=255)
tACTGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGa > 2:2081163/1‑140 (MQ=255)
tGCTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaa > 1:1194576/1‑140 (MQ=255)
cTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaaaa > 2:2257458/1‑140 (MQ=255)
cTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaaaa > 1:1819143/1‑140 (MQ=255)
cTTTTACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaaaa > 1:266324/1‑140 (MQ=255)
tttACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaaaaaa > 1:508767/1‑140 (MQ=255)
ttACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATc > 1:588715/1‑123 (MQ=255)
ttACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaa < 2:1832638/135‑1 (MQ=255)
ttACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGaaaa > 1:1832638/1‑135 (MQ=255)
ttACGAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAAt < 2:1118190/140‑1 (MQ=255)
gAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATaaca < 2:538025/140‑1 (MQ=255)
gAGCTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATaaca < 2:1039021/140‑1 (MQ=255)
cTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACt > 1:637085/1‑140 (MQ=255)
cTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACt > 1:383116/1‑140 (MQ=255)
cTTGCGAAAACTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACt > 1:808418/1‑140 (MQ=255)
aaaCTGCAAACGCTTATGCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTAt < 1:1655297/140‑1 (MQ=255)
aaaCTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTAt < 2:2290212/140‑1 (MQ=255)
aaaCTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTAt < 2:383116/140‑1 (MQ=255)
aaCTGCAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATc < 2:1263484/140‑1 (MQ=255)
|
CCAGGTCACAGGCCTGGGCTGTTTGCGTTACCGCCATGTCATTCTCCTTAAGTTAACTAACCCGGTACTTAAGCCAGGGTATACTTGTAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATC > NC_000913/1936278‑1936548
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
