Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,114,707 |
G→A |
S397L (TCA→TTA) |
wcaM ← |
putative colanic acid biosynthesis protein WcaM |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,114,707 | 0 | G | A | 100.0%
| 425.2
/ NA
| 119 | S397L (TCA→TTA) | wcaM | putative colanic acid biosynthesis protein WcaM |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (59/60); total (59/60) |
Only 100 of 119 total aligned reads displayed.
GATATCGACGGAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATG > NC_000913/2114571‑2114841
|
gATATCGACGGAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAgg < 2:1293711/140‑1 (MQ=255)
atCGACGGAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGAtt > 2:1975898/1‑140 (MQ=255)
tCGACGGAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTc < 2:1913171/140‑1 (MQ=255)
gACGGAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCt < 2:1090047/140‑1 (MQ=255)
gAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCAt < 1:331621/140‑1 (MQ=255)
gAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCAt < 2:657921/140‑1 (MQ=255)
aGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATc > 1:1402360/1‑140 (MQ=255)
gCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATca < 1:1166538/140‑1 (MQ=255)
gCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATca < 1:1909222/140‑1 (MQ=255)
gCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATca < 1:1729152/140‑1 (MQ=255)
gCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATca < 2:1934195/140‑1 (MQ=255)
tCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGa > 2:1808192/1‑140 (MQ=255)
tCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGa > 1:1781964/1‑140 (MQ=255)
tttCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATAttt > 2:90922/1‑140 (MQ=255)
attcaCCGCATGAACACTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCa < 2:1500040/140‑1 (MQ=255)
ttcaCCGCATGAACATTTGCAGGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCAt > 2:1709347/1‑140 (MQ=255)
ttcaCCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATca > 1:841139/1‑124 (MQ=255)
ttcaCCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATca < 2:841139/124‑1 (MQ=255)
ttcaCCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCAt > 1:1973484/1‑140 (MQ=255)
cGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTACGCATaaaaa > 1:2247668/1‑140 (MQ=255)
cATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATaaaaaaa > 1:921872/1‑140 (MQ=255)
tGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATg < 1:1865067/140‑1 (MQ=255)
aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGtt < 2:2293802/140‑1 (MQ=255)
aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGtt < 1:363940/140‑1 (MQ=255)
aaCATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGtt < 1:1813454/140‑1 (MQ=255)
aTTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCg < 1:1709347/140‑1 (MQ=255)
aTTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCg < 1:1273586/140‑1 (MQ=255)
tttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCgg > 2:1050100/1‑140 (MQ=255)
ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGt < 1:952161/140‑1 (MQ=255)
ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGt < 2:1765179/140‑1 (MQ=255)
ttGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGt < 1:1550689/140‑1 (MQ=255)
tGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGtt < 1:1385571/140‑1 (MQ=255)
gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGttt > 1:1177796/1‑140 (MQ=255)
gCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGttt > 1:1709827/1‑140 (MQ=255)
cAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTttg < 2:1760597/140‑1 (MQ=255)
cAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTttg < 1:90922/140‑1 (MQ=255)
cAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTttg < 1:781286/140‑1 (MQ=255)
aaGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTACATCACATTGATATTTCGCATAAAAAAATGTTGCGGTttgt < 2:308109/140‑1 (MQ=255)
gagaCAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTttgttg < 1:1808192/140‑1 (MQ=255)
gagaCAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTttgttg < 1:566808/140‑1 (MQ=255)
aCAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTgtgt < 2:1334473/140‑1 (MQ=255)
cagcagTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTa > 1:2209595/1‑140 (MQ=255)
cagcagTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTa > 1:1833298/1‑140 (MQ=255)
cagTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACt > 2:1298908/1‑140 (MQ=255)
cagTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACt > 1:436650/1‑140 (MQ=255)
cagTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACt > 2:535531/1‑140 (MQ=255)
tgtTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCg > 1:1750261/1‑122 (MQ=255)
tgtTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCg < 2:1750261/122‑1 (MQ=255)
tgtTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCa > 1:1448835/1‑140 (MQ=255)
gtTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAg < 1:2194479/140‑1 (MQ=255)
tttCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGc > 1:690399/1‑140 (MQ=255)
tttCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGc > 2:1596924/1‑140 (MQ=255)
tttCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGc > 2:1296068/1‑140 (MQ=255)
ttCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCg > 2:243668/1‑140 (MQ=255)
ttttCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGacgca < 2:835901/140‑1 (MQ=255)
ttCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGacgcacg > 1:2397991/1‑140 (MQ=255)
cGCCATAAAAACACCATGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCt > 2:355768/1‑140 (MQ=255)
cGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCt < 2:613626/140‑1 (MQ=255)
cGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCt > 2:915314/1‑140 (MQ=255)
aTAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAt < 2:1781964/140‑1 (MQ=255)
aaaaaCACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAACAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAtct < 2:2247668/140‑1 (MQ=255)
aaaaaCACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAtct < 2:436650/140‑1 (MQ=255)
aaaaaCACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAtct < 2:690399/140‑1 (MQ=255)
aaaaaCACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAtct < 2:737663/140‑1 (MQ=255)
ccacGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgtt > 1:76710/1‑140 (MQ=255)
ccacGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgtt > 1:129963/1‑140 (MQ=255)
cacGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgtta < 2:129963/140‑1 (MQ=255)
acGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgttag > 2:479788/1‑140 (MQ=255)
cGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgttagt > 1:82370/1‑140 (MQ=255)
gAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgttagtt > 1:1722484/1‑140 (MQ=255)
aaCGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATgttagtta > 2:1240805/1‑140 (MQ=255)
tCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCAT‑AAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGcc > 1:2390558/1‑140 (MQ=255)
cTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGcc < 1:786295/140‑1 (MQ=255)
cTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGcc < 1:963161/140‑1 (MQ=255)
cTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGcc < 2:76710/140‑1 (MQ=255)
cTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGcc < 2:1214305/140‑1 (MQ=255)
tGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCcaca < 2:1973484/140‑1 (MQ=255)
gcgcATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGttagttag < 2:2018477/132‑1 (MQ=255)
cATGTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAgg < 2:1402360/140‑1 (MQ=255)
gTCAAAGTTCATGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGaaa > 1:825242/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCcaca > 2:2240175/1‑123 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCcaca < 1:2240175/123‑1 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 1:1903192/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 2:1126434/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 1:1492956/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 1:1923959/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 1:52271/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 1:590445/1‑140 (MQ=255)
aTGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTccc > 1:1647503/1‑140 (MQ=255)
tGCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGCTGCGGTTTGTTGGGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTcccc > 2:1550881/1‑139 (MQ=255)
gCTCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCcgg < 1:1240805/140‑1 (MQ=255)
tCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCgcggcg < 1:126324/140‑1 (MQ=255)
tCAATGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCcggcg < 1:1975898/140‑1 (MQ=255)
tGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGgaga > 1:2029182/1‑140 (MQ=255)
tGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGgaga > 1:396157/1‑140 (MQ=255)
tGCGGGTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGgaga > 2:156033/1‑140 (MQ=255)
gggTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGAttt < 2:82370/140‑1 (MQ=255)
gTCCAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGa > 2:306905/1‑140 (MQ=255)
cAACTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATg > 1:558614/1‑140 (MQ=255)
aCTAAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCcggcg < 2:398890/126‑1 (MQ=255)
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GATATCGACGGAGCTTTGTCCTTTTTCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATG > NC_000913/2114571‑2114841
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
