Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,117,829 |
T→C |
K192K (AAA→AAG) |
wcaK ← |
putative colanic acid biosynthesis pyruvyl transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,117,829 | 0 | T | C | 100.0%
| 446.5
/ NA
| 123 | K192K (AAA→AAG) | wcaK | putative colanic acid biosynthesis pyruvyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (62/61); total (62/61) |
Only 100 of 125 total aligned reads displayed.
ACCGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGTTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCTTTTTCG > NC_000913/2117695‑2117965
|
aCCGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcat < 1:518844/140‑1 (MQ=255)
aCCGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcat < 1:2225974/140‑1 (MQ=255)
aCCGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcat > 1:718355/1‑140 (MQ=255)
cGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcatca > 1:1995533/1‑140 (MQ=255)
cGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcatca > 1:930251/1‑140 (MQ=255)
cGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcat < 2:2381895/138‑1 (MQ=255)
cGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcat > 1:2381895/1‑138 (MQ=255)
ttttCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGa > 1:2001123/1‑140 (MQ=255)
ttttCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGa < 2:1154623/140‑1 (MQ=255)
tgCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTtcat < 1:1278986/126‑1 (MQ=255)
tgCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGa > 2:1330851/1‑140 (MQ=255)
tgCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGa > 2:1885256/1‑140 (MQ=255)
tgCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTACACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCaaa > 2:1706739/1‑135 (MQ=255)
tgCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTACACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCaaa < 1:1706739/135‑1 (MQ=255)
cGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGAcc > 2:1001777/1‑140 (MQ=255)
cGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGAcc > 1:2162710/1‑140 (MQ=255)
cGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGAcc > 2:889008/1‑140 (MQ=255)
cGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGAcc > 1:1485879/1‑140 (MQ=255)
aaCGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGAtt < 1:395461/140‑1 (MQ=255)
tCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTcgcg < 1:2159459/140‑1 (MQ=255)
tCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTcgcg < 1:682321/140‑1 (MQ=255)
tCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTcgcg < 1:62502/140‑1 (MQ=255)
ccagccagTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCgcgc < 1:1885256/140‑1 (MQ=255)
agTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATc > 2:564241/1‑140 (MQ=255)
gtgtTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGTGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCa < 2:923779/140‑1 (MQ=255)
gtgtTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCa < 1:717267/140‑1 (MQ=255)
aaCGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGt > 2:1433288/1‑140 (MQ=255)
aCGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTc > 2:39114/1‑140 (MQ=255)
gCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCa < 1:1433288/140‑1 (MQ=255)
aTAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGt < 1:1902330/140‑1 (MQ=255)
tAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTg > 2:1086072/1‑140 (MQ=255)
gCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGAc < 1:685157/140‑1 (MQ=255)
cGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCaaaa < 2:663750/140‑1 (MQ=255)
ggTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCaaaaa < 1:2320503/140‑1 (MQ=255)
ggTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCaaaaa > 2:536654/1‑140 (MQ=255)
ggTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCaaaaa > 2:2037940/1‑140 (MQ=255)
ggTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCaaaaa < 2:2162710/140‑1 (MQ=255)
tGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACg > 2:2170947/1‑140 (MQ=255)
gTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGt > 1:804453/1‑140 (MQ=255)
tcttctGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGtt < 2:1637977/140‑1 (MQ=255)
cttctGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTc > 1:282074/1‑140 (MQ=255)
tgtgtgGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCa < 1:896626/140‑1 (MQ=255)
tgtgGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGt > 1:247283/1‑140 (MQ=255)
ggtgATCGACCAGCCACTCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCACGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTgg < 2:2145525/140‑1 (MQ=255)
ggtgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAGCGTAGTTCGCCAGTTgg < 2:1485879/140‑1 (MQ=255)
ggtgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCa > 2:155910/1‑135 (MQ=255)
ggtgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCa > 1:2050292/1‑135 (MQ=255)
ggtgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCa < 2:2050292/135‑1 (MQ=255)
ggtgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTgg > 2:1054075/1‑140 (MQ=255)
ggtgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTgg > 2:1279099/1‑140 (MQ=255)
tgATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGtt > 2:1169894/1‑140 (MQ=255)
gATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTa < 1:1169894/140‑1 (MQ=255)
gATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTa > 2:1430552/1‑140 (MQ=255)
aTCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTaa > 1:324929/1‑140 (MQ=255)
cGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAAt > 2:705075/1‑140 (MQ=255)
gACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAAtt > 2:585052/1‑140 (MQ=255)
ccAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGc < 1:1330851/140‑1 (MQ=255)
cAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCt < 1:1001777/140‑1 (MQ=255)
cAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCt < 1:516560/140‑1 (MQ=255)
gCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCa > 2:1341700/1‑140 (MQ=255)
gCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCa > 2:912965/1‑140 (MQ=255)
cgcgGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCt > 1:1707608/1‑140 (MQ=255)
gcgGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTg > 2:872039/1‑140 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:2072347/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:1352787/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 2:324929/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:1430552/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:1279099/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:564241/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:752544/140‑1 (MQ=255)
gTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:690202/140‑1 (MQ=255)
aTCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACg < 2:1995533/140‑1 (MQ=255)
tCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACgg > 2:2382715/1‑140 (MQ=255)
aCGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGcc < 2:2285199/140‑1 (MQ=255)
cGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGcc > 2:1992912/1‑139 (MQ=255)
cGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGcc < 1:1992912/139‑1 (MQ=255)
cGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCa < 1:585052/140‑1 (MQ=255)
cGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCa > 2:1317486/1‑140 (MQ=255)
cGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCa > 1:1319377/1‑140 (MQ=255)
aTGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa > 2:900628/1‑129 (MQ=255)
aTGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGaa < 1:900628/129‑1 (MQ=255)
aTGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAacac > 1:437561/1‑140 (MQ=255)
tGTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACt < 2:666947/140‑1 (MQ=255)
gTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACtg > 1:2266400/1‑140 (MQ=255)
gTTCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACtg > 1:582311/1‑140 (MQ=255)
tCCACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACtgtg < 2:626332/140‑1 (MQ=255)
cACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGAc < 2:804453/140‑1 (MQ=255)
cACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGAc < 2:2266400/140‑1 (MQ=255)
cACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGAc < 2:582311/140‑1 (MQ=255)
cACTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGAc < 2:247283/140‑1 (MQ=255)
cTTTTGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCa > 1:356224/1‑140 (MQ=255)
tttGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAAt > 2:2166153/1‑140 (MQ=255)
tGCGGTGGTGATATTGCTGCGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTTGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCa > 2:1467744/1‑140 (MQ=255)
tgctgcGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCttt < 1:1317486/140‑1 (MQ=255)
ctgcGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCttttt < 2:632519/140‑1 (MQ=255)
ctgcGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCttttt < 2:930251/140‑1 (MQ=255)
tgcGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCTTTTTc > 2:361493/1‑140 (MQ=255)
tgcGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCTTTTTc > 1:1434978/1‑140 (MQ=255)
tgcGCTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCTTTTTc > 1:2013391/1‑140 (MQ=255)
gcgcTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCa < 1:689039/122‑1 (MQ=255)
|
ACCGTTTTCTGTTGTGCGGCAACGTCCAGCCAGTGTTGAACGGCATAGCTGGCGGTGAAGTCTTCTGTGTGGTGATCGACCAGCCACGCGGTATCGACGCCATGTTCCACTTTTGCGGTGGTGATATTGCTGCGTTTCATCAGATCAAAGCTGACCGATTCGCGCAGGATCAGCGCGTCGCAGTGACCAAAAACGTAGTTCGCCAGTTGGTTAAATTGCTCATCCTGGAACGGGCCAACACTGTGACCAATCATAAACAGCGGCTTTTTCG > NC_000913/2117695‑2117965
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
