Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,144,943 |
A→G |
T560A (ACG→GCG) |
dgcE → |
putative diguanylate cyclase DgcE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,144,943 | 0 | A | G | 100.0%
| 490.2
/ NA
| 134 | T560A (ACG→GCG) | dgcE | putative diguanylate cyclase DgcE |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (63/71); total (63/71) |
Only 100 of 137 total aligned reads displayed.
GCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGTT > NC_000913/2144806‑2145076
|
gCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCg > 1:2338812/1‑140 (MQ=255)
ccATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTgcgc < 1:1352707/140‑1 (MQ=255)
atCCGCGCCCTCGCCAACCGGGTACTGGATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGa > 1:1281846/1‑140 (MQ=255)
atCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGa > 1:1078700/1‑140 (MQ=255)
atCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGa > 1:2051403/1‑140 (MQ=255)
atCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGa > 1:1741947/1‑140 (MQ=255)
atCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGa > 2:1414341/1‑140 (MQ=255)
atCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGa > 1:1267330/1‑140 (MQ=255)
tCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGAt < 2:654711/140‑1 (MQ=255)
cgcCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCg > 1:1845203/1‑130 (MQ=255)
cgcCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCa > 2:1113722/1‑140 (MQ=255)
cgcCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCa > 2:555780/1‑140 (MQ=255)
gcCCTCGCAAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCAt < 2:865343/140‑1 (MQ=255)
cGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTg > 1:1356778/1‑140 (MQ=255)
cGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTg > 2:2224357/1‑140 (MQ=255)
cGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCCAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTg < 2:1463206/140‑1 (MQ=255)
ccAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGaa > 2:1385043/1‑140 (MQ=255)
aCCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGcc < 1:1592790/140‑1 (MQ=255)
aCCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTACACATTGCGCTTGATTCCATCGGTGAAGcc < 2:2386274/140‑1 (MQ=255)
ccGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGCAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCg < 2:673614/140‑1 (MQ=255)
ccGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATAGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCg > 2:950545/1‑140 (MQ=255)
cGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGt < 1:1258104/140‑1 (MQ=255)
ggTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTgg > 2:2360115/1‑140 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1898217/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 2:1286122/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1414341/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:165412/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 2:194212/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1385043/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:709098/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 2:2298651/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:4529/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 2:498177/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:2360115/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1113722/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1802581/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:2224357/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 2:855908/140‑1 (MQ=255)
gTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1144764/140‑1 (MQ=255)
tACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTg < 2:1956122/129‑1 (MQ=255)
tACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTc < 2:729780/140‑1 (MQ=255)
cTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTg < 1:2329850/140‑1 (MQ=255)
cTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTg < 1:61871/140‑1 (MQ=255)
tGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGt < 2:1908158/140‑1 (MQ=255)
aaTAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:756519/134‑1 (MQ=255)
aaTAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTAt > 2:355146/1‑140 (MQ=255)
aTAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACTAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTg > 1:1512270/1‑131 (MQ=255)
aTAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACTAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTg < 2:1512270/131‑1 (MQ=255)
aTAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTAtt > 1:629411/1‑140 (MQ=255)
aagaagGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGat < 2:629411/140‑1 (MQ=255)
aaaagGGGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGGATTGTTTCAGGAAAAAAAGCGCCTGCACATTTCGCTTGATTTCATCGGTGAAGCCGGGGGCTGTATTGata > 2:251298/3‑140 (MQ=255)
gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGt < 1:1442375/124‑1 (MQ=255)
gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGata > 1:874727/1‑135 (MQ=255)
gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGata < 2:874727/135‑1 (MQ=255)
gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCg > 1:1736576/1‑140 (MQ=255)
gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCg > 1:946324/1‑140 (MQ=255)
gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCg > 1:1224914/1‑140 (MQ=255)
gAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGAt < 2:1168267/140‑1 (MQ=255)
aGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGa > 2:2336513/1‑140 (MQ=255)
gTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGaa > 2:293048/1‑140 (MQ=255)
tCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGa > 1:1932101/1‑135 (MQ=255)
cGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGCGCGCCTACACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGaaaa < 2:2119186/140‑1 (MQ=255)
cGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGaaaa < 2:1281846/140‑1 (MQ=255)
tcctcGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCttt > 2:1067336/1‑140 (MQ=255)
tatGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTgg < 1:2183101/140‑1 (MQ=255)
tGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCg < 1:963527/140‑1 (MQ=255)
tGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCg < 2:76419/140‑1 (MQ=255)
gATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGga > 2:2376046/1‑140 (MQ=255)
tGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGgaga < 2:365127/138‑1 (MQ=255)
tGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGgaga > 1:365127/1‑138 (MQ=255)
tGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGagaag > 2:199866/1‑140 (MQ=255)
tGACCGAAATGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGagaag > 1:2084659/1‑140 (MQ=255)
aCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGCGAAGAt > 1:495732/1‑140 (MQ=255)
aCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGAt > 2:1116207/1‑140 (MQ=255)
aCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGAt > 2:1712763/1‑140 (MQ=255)
aCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGAt > 2:2077413/1‑140 (MQ=255)
aCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGAt > 1:2225092/1‑140 (MQ=255)
aaGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGc > 2:1767599/1‑140 (MQ=255)
aaGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGc > 1:1917439/1‑140 (MQ=255)
aaaCAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTg < 1:664600/140‑1 (MQ=255)
cAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGAc < 2:1356778/140‑1 (MQ=255)
cTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCa > 1:339353/1‑140 (MQ=255)
cTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCa > 1:256874/1‑140 (MQ=255)
ttAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAg > 1:1223616/1‑140 (MQ=255)
cGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGgaag < 2:1254552/140‑1 (MQ=255)
gCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGgaag > 2:1823998/1‑136 (MQ=255)
gCATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGgaag < 1:1823998/136‑1 (MQ=255)
cATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCg > 1:513644/1‑140 (MQ=255)
cATTGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCg > 2:1776981/1‑140 (MQ=255)
ttGTTTCAGGAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGtt < 2:2084659/140‑1 (MQ=255)
gAAAAAGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTcc < 1:2153801/140‑1 (MQ=255)
aaaaaGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCg < 2:1741947/140‑1 (MQ=255)
aaaaaGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCg < 2:1224914/140‑1 (MQ=255)
aaGAGCGCCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTc > 1:2157586/1‑140 (MQ=255)
gcgcCTGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGa < 1:929961/140‑1 (MQ=255)
tGCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGgtg < 1:355146/140‑1 (MQ=255)
gCACATTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGgtgt < 1:199866/140‑1 (MQ=255)
cacaTTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGtt < 1:251298/140‑1 (MQ=255)
cacaTTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGtt > 1:959890/1‑140 (MQ=255)
cacaTTGCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGtt < 1:1035837/140‑1 (MQ=255)
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GCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGTT > NC_000913/2144806‑2145076
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
