Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F28 I1 R1 258 142.3 4824480 99.1% 4781059 138.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,285,722 C→T A449A (GCC→GCT)  yejM → putative cardiolipin transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,285,7220CT100.0% 714.3 / NA 198A449A (GCC→GCT) yejMputative cardiolipin transport protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (101/97);  total (101/97)

Only 100 of 198 total aligned reads displayed.

ATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGA  >  NC_000913/2285585‑2285853
                                                                                                                                         |                                                                                                                                   
 ttGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGt                                                                                                                                  <  1:1712804/140‑1 (MQ=255)
 ttGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGt                                                                                                                                  <  1:787645/140‑1 (MQ=255)
   gacgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                >  1:761053/1‑140 (MQ=255)
   gacgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                <  1:924672/140‑1 (MQ=255)
   gacgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                <  1:2046825/140‑1 (MQ=255)
   gacgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                <  2:393508/140‑1 (MQ=255)
   gacgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                >  2:1039781/1‑140 (MQ=255)
    acgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCgg                                                                                                                               >  2:2332349/1‑140 (MQ=255)
    acgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                <  1:1762354/139‑1 (MQ=255)
    acgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCg                                                                                                                                >  2:1762354/1‑139 (MQ=255)
     cgacAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCggg                                                                                                                              <  2:2014659/140‑1 (MQ=255)
        cAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTa                                                                                                                           <  1:2203098/140‑1 (MQ=255)
        cAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTa                                                                                                                           >  2:216293/1‑140 (MQ=255)
         aGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTAt                                                                                                                          >  1:276689/1‑140 (MQ=255)
          gCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGt                                                                                                                                  <  1:429493/131‑1 (MQ=255)
          gCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGt                                                                                                                                  >  2:429493/1‑131 (MQ=255)
          gCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTa                                                                                                                           <  1:1583356/138‑1 (MQ=255)
          gCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTAtt                                                                                                                         <  1:1642079/140‑1 (MQ=255)
            aaTCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTcc                                                                                                                       <  2:462617/140‑1 (MQ=255)
              tCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCAc                                                                                                                     <  1:2213070/140‑1 (MQ=255)
                   agGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGaac                                                                                                                >  1:969641/1‑138 (MQ=255)
                      cATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGaa                                                                                                             <  2:587790/140‑1 (MQ=255)
                       aTTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAag                                                                                                            <  2:28259/140‑1 (MQ=255)
                          tGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAgg                                                                                                         >  1:1355542/1‑140 (MQ=255)
                             accgAAATATAGCCGGGCGGCAGGCAATGTAGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGgaag                                                                                                      <  2:1477681/137‑1 (MQ=255)
                              cGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGgaaga                                                                                                     <  1:2332349/140‑1 (MQ=255)
                              cGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGgaaga                                                                                                     <  1:1237229/140‑1 (MQ=255)
                              cGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGgaaga                                                                                                     <  2:1666236/140‑1 (MQ=255)
                                gAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGaaa                                                                                                   >  1:1793324/1‑140 (MQ=255)
                                       aGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGa                                                                                            <  1:1293771/140‑1 (MQ=255)
                                           gggCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTgg                                                                                        >  1:345685/1‑140 (MQ=255)
                                           gggCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTgg                                                                                        >  2:1541370/1‑140 (MQ=255)
                                           gggCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTgg                                                                                        >  2:1903363/1‑140 (MQ=255)
                                           gggCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTgg                                                                                        >  2:121126/1‑140 (MQ=255)
                                           gggCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTgg                                                                                        >  2:802443/1‑140 (MQ=255)
                                             gcggcAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTTGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTc                                                                                      >  2:1382060/1‑140 (MQ=255)
                                              cggcAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTcc                                                                                     >  1:1310232/1‑140 (MQ=255)
                                                gcaggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCa                                                                                   <  2:493030/140‑1 (MQ=255)
                                                gcaggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCa                                                                                   <  2:1040915/140‑1 (MQ=255)
                                                            gATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCa                                                                       <  1:1903363/140‑1 (MQ=255)
                                                            gATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCa                                                                       <  1:1184008/140‑1 (MQ=255)
                                                            gATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCa                                                                       <  2:1141106/140‑1 (MQ=255)
                                                              tGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAgg                                                                     >  2:277013/1‑140 (MQ=255)
                                                              tGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAgg                                                                     >  2:2121772/1‑140 (MQ=255)
                                                              tGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAgg                                                                     >  1:1650751/1‑140 (MQ=255)
                                                              tGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAgg                                                                     >  1:1468632/1‑140 (MQ=255)
                                                                    gATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAt                                                               <  2:1828071/140‑1 (MQ=255)
                                                                    gATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAt                                                               >  1:2077322/1‑140 (MQ=255)
                                                                    gATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAt                                                               >  1:1839446/1‑140 (MQ=255)
                                                                    gATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAt                                                               >  1:1397933/1‑140 (MQ=255)
                                                                    gATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAt                                                               >  2:607967/1‑140 (MQ=255)
                                                                     aTCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAtt                                                              >  2:150410/1‑140 (MQ=255)
                                                                               tGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCAc                                                    >  2:922920/1‑140 (MQ=255)
                                                                               tGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCAc                                                    >  1:100026/1‑140 (MQ=255)
                                                                               tGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCAc                                                    >  1:286474/1‑140 (MQ=255)
                                                                               tGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCAc                                                    >  1:1495178/1‑140 (MQ=255)
                                                                                 cTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTg                                                  >  2:2057608/1‑140 (MQ=255)
                                                                                   cAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGc                                                <  2:312530/140‑1 (MQ=255)
                                                                                           tGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACg                                        >  1:966783/1‑140 (MQ=255)
                                                                                            gCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGc                                       >  1:2189138/1‑140 (MQ=255)
                                                                                            gCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGc                                       >  2:582181/1‑140 (MQ=255)
                                                                                            gCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGc                                       >  2:1895335/1‑140 (MQ=255)
                                                                                            gCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGc                                       >  1:66276/1‑140 (MQ=255)
                                                                                            gCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCC‑CTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGcc                                      >  2:529218/1‑140 (MQ=255)
                                                                                                gATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgc                                   >  1:2093710/1‑140 (MQ=255)
                                                                                                gATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgc                                   >  2:406022/1‑140 (MQ=255)
                                                                                                gATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCC‑CTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgcg                                  <  1:529218/140‑1 (MQ=255)
                                                                                                 aTTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgcg                                  <  1:1046052/140‑1 (MQ=255)
                                                                                                 aTTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgcg                                  <  2:1793347/140‑1 (MQ=255)
                                                                                                 aTTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgcg                                  <  2:761053/140‑1 (MQ=255)
                                                                                                    cTGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAg                               <  2:1285761/140‑1 (MQ=255)
                                                                                                     tGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGgcgc                                 >  2:681803/1‑137 (MQ=255)
                                                                                                     tGGCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGc                              >  2:2268278/1‑140 (MQ=255)
                                                                                                      ggCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCg                             <  1:1984739/140‑1 (MQ=255)
                                                                                                      ggCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCg                             <  2:1410640/140‑1 (MQ=255)
                                                                                                       gCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCa                                >  2:618272/1‑136 (MQ=255)
                                                                                                       gCAAACTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCa                                <  1:618272/136‑1 (MQ=255)
                                                                                                          aaCTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTAtt                         <  1:1541370/140‑1 (MQ=255)
                                                                                                          aaCTGGACAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTAtt                         <  1:213570/140‑1 (MQ=255)
                                                                                                                aCAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGct                   <  2:2077322/140‑1 (MQ=255)
                                                                                                                aCAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGct                   <  1:2145396/140‑1 (MQ=255)
                                                                                                                 cAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGt                            >  1:1849546/1‑130 (MQ=255)
                                                                                                                 cAATACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGctc                  <  2:1310232/140‑1 (MQ=255)
                                                                                                                   aTACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCCCGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctg                <  2:2189138/140‑1 (MQ=255)
                                                                                                                   aTACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctg                <  1:1039781/140‑1 (MQ=255)
                                                                                                                    tACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctga               <  1:2268278/140‑1 (MQ=255)
                                                                                                                    tACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctga               <  2:2093710/140‑1 (MQ=255)
                                                                                                                    tACGGTGGTGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctga               <  1:474330/140‑1 (MQ=255)
                                                                                                                       ggtggtGATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctg                <  1:80243/136‑1 (MQ=255)
                                                                                                                         tggtgATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGAt          >  2:1061093/1‑140 (MQ=255)
                                                                                                                         tggtgATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGAt          >  1:1795737/1‑140 (MQ=255)
                                                                                                                         tggtgATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGAt          >  2:799720/1‑140 (MQ=255)
                                                                                                                         tggtgATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGAt          >  2:874158/1‑140 (MQ=255)
                                                                                                                             gATTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATa      <  1:256492/140‑1 (MQ=255)
                                                                                                                              aTTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctga               <  2:263972/130‑1 (MQ=255)
                                                                                                                              aTTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTctga               <  2:134705/130‑1 (MQ=255)
                                                                                                                              aTTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATAc     <  1:593702/140‑1 (MQ=255)
                                                                                                                              aTTATCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATAc     >  1:1010419/1‑140 (MQ=255)
                                                                                                                                 aTCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGa  >  2:195475/1‑140 (MQ=255)
                                                                                                                                 aTCACTGCTGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGa  >  2:1590589/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                   
ATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGA  >  NC_000913/2285585‑2285853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A