Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,369,665 |
G→A |
G543S (GGT→AGT) |
arnA → |
fused UDP‑4‑amino‑4‑deoxy‑L‑arabinose formyltransferase/UDP‑glucuronate dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,369,665 | 0 | G | A | 99.2%
| 427.4
/ ‑4.7
| 122 | G543S (GGT→AGT) | arnA | fused UDP‑4‑amino‑4‑deoxy‑L‑arabinose formyltransferase/UDP‑glucuronate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (67/54); total (67/55) |
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.44e-01 |
Only 100 of 122 total aligned reads displayed.
CTGGATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATGGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGAAAAAC > NC_000913/2369530‑2369800
|
cTGGATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTAt < 2:546225/140‑1 (MQ=255)
ggATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCg < 2:543190/140‑1 (MQ=255)
ggATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCg < 2:2315900/140‑1 (MQ=255)
gATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGa < 1:313076/140‑1 (MQ=255)
gATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGa > 2:1502402/1‑140 (MQ=255)
aTAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATGGTATCGAg < 1:407887/140‑1 (MQ=255)
tAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAgg < 1:870153/140‑1 (MQ=255)
ccTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGt > 1:800806/1‑140 (MQ=255)
aaTGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTtata > 2:1842587/1‑140 (MQ=255)
aTGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCg > 1:804572/1‑129 (MQ=255)
cAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGc > 2:334622/1‑140 (MQ=255)
cAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGc < 1:1511608/140‑1 (MQ=255)
aGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCa < 1:1761824/140‑1 (MQ=255)
cgcgAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCg < 1:388669/123‑1 (MQ=255)
cgcgAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCg > 2:388669/1‑123 (MQ=255)
cgcgAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCAtt > 1:1852891/1‑140 (MQ=255)
cgcgAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCAtt > 2:833245/1‑140 (MQ=255)
cgcgAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCAtt > 1:2378593/1‑140 (MQ=255)
aTTGGCAGCTCCCGCGCTATTACACAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGa > 2:1007999/1‑140 (MQ=255)
cccGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGa < 1:531328/140‑1 (MQ=255)
cccGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGa > 2:1744196/1‑140 (MQ=255)
ccGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGaa < 2:1857866/140‑1 (MQ=255)
aTTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTg > 1:531969/1‑140 (MQ=255)
aCGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGa < 1:2135108/140‑1 (MQ=255)
gCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACg < 1:1271093/140‑1 (MQ=255)
cAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGc < 2:2049424/135‑1 (MQ=255)
aaCTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAAt < 1:1937114/128‑1 (MQ=255)
aCTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 1:833245/140‑1 (MQ=255)
aCTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 1:334622/140‑1 (MQ=255)
aCTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 2:531969/140‑1 (MQ=255)
cTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg > 2:2082104/1‑139 (MQ=255)
cTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 1:2082104/139‑1 (MQ=255)
cTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGa > 2:1313110/1‑140 (MQ=255)
cTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGa > 2:250624/1‑140 (MQ=255)
cTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGa > 2:859225/1‑140 (MQ=255)
tCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGaa < 1:1842587/140‑1 (MQ=255)
cATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg > 2:1941240/1‑137 (MQ=255)
cATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 1:1941240/137‑1 (MQ=255)
aTTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg > 2:589919/1‑136 (MQ=255)
aTTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 1:589919/136‑1 (MQ=255)
aTTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAAt > 2:769805/1‑140 (MQ=255)
tctcAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTa > 2:1224096/1‑140 (MQ=255)
aTCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCg < 1:687616/123‑1 (MQ=255)
aTCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCg > 2:687616/1‑123 (MQ=255)
tCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGaa < 1:1583672/130‑1 (MQ=255)
tCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGaa > 2:1583672/1‑130 (MQ=255)
tGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACAtt > 1:80248/1‑140 (MQ=255)
ggTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGGTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg < 2:1405392/125‑1 (MQ=255)
ggTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGGTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTg > 1:1405392/1‑125 (MQ=255)
ggTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTg > 2:487743/1‑140 (MQ=255)
gTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCTCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTgg < 2:1296986/140‑1 (MQ=255)
gTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGTGGGAAATCGCTGCGACGGTGAAATTATCAACATTgg > 1:1775056/1‑140 (MQ=255)
gTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTgg < 2:800806/140‑1 (MQ=255)
aGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa < 1:1314955/140‑1 (MQ=255)
aGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa < 2:80248/140‑1 (MQ=255)
aGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa < 1:1502402/140‑1 (MQ=255)
aGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa < 2:257889/140‑1 (MQ=255)
aGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa < 1:1007999/140‑1 (MQ=255)
aaGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTa > 1:1597483/1‑126 (MQ=255)
aaGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTa < 2:1597483/126‑1 (MQ=255)
aaGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAAt > 2:1009/1‑140 (MQ=255)
aaGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAAt > 1:842303/1‑140 (MQ=255)
aaGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAAt > 1:558296/1‑140 (MQ=255)
ttCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTg > 2:2059306/1‑140 (MQ=255)
ttCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTg > 2:305158/1‑140 (MQ=255)
ttCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTg > 1:488201/1‑140 (MQ=255)
cACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAAc > 2:125847/1‑125 (MQ=255)
cACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAAc < 1:125847/125‑1 (MQ=255)
cACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa > 2:233570/1‑132 (MQ=255)
cACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCa < 1:233570/132‑1 (MQ=255)
cACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTgag > 1:1769948/1‑140 (MQ=255)
cACCGATTAAGCTGATTCATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTgag > 2:153014/1‑140 (MQ=255)
aTTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGa > 1:986488/1‑140 (MQ=255)
tAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAg < 1:859225/140‑1 (MQ=255)
tAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAg < 1:250624/140‑1 (MQ=255)
aaGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGc < 2:2030305/140‑1 (MQ=255)
aaGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGc < 2:2264927/140‑1 (MQ=255)
aaGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGc < 2:842303/140‑1 (MQ=255)
aaGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGc > 1:1412159/1‑140 (MQ=255)
aGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATAGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCg < 1:1419621/140‑1 (MQ=255)
cTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAg < 2:2241225/140‑1 (MQ=255)
cTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAg < 1:2059306/140‑1 (MQ=255)
cTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAg < 2:488201/140‑1 (MQ=255)
ttgatGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCAtt < 2:1852891/140‑1 (MQ=255)
ttgatGGCGAAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCAtt > 2:2143840/1‑140 (MQ=255)
gatGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGa < 1:1189704/140‑1 (MQ=255)
aCAAAAACGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCg < 2:806430/140‑1 (MQ=255)
aaaCGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCga > 1:1701160/1‑137 (MQ=255)
aaaCGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCga < 2:1701160/137‑1 (MQ=255)
aaCGCTGCTTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGAtg < 2:1129728/140‑1 (MQ=255)
ctgctTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACt < 1:2073050/126‑1 (MQ=255)
ctgctTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGAtgctgc > 1:2345969/1‑140 (MQ=255)
ctTTACTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTgg > 1:1319309/1‑140 (MQ=255)
aCTGATATTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAg < 1:769805/140‑1 (MQ=255)
atTCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGa > 1:208155/1‑140 (MQ=255)
ttCGCGATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGaa > 2:799750/1‑140 (MQ=255)
cgcgATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGaaaa > 1:1982633/1‑140 (MQ=255)
cgcgATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGaaaa > 1:1285348/1‑140 (MQ=255)
cgcgATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGaaaa > 2:2274993/1‑140 (MQ=255)
cgATAGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGAAAAAc > 1:993715/1‑140 (MQ=255)
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CTGGATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATGGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGAAAAAC > NC_000913/2369530‑2369800
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
