Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F28 I1 R1	258	142.3	4824480	99.1%	4781059	138.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,437,681	T→C	K57K (AAA→AAG)	pdxB ←	erythronate‑4‑phosphate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,437,681	0	T	C	100.0%	493.1 / NA	136	K57K (AAA→AAG)	pdxB	erythronate‑4‑phosphate dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (74/62); total (74/62)

Only 100 of 136 total aligned reads displayed.

GGAGGAGAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGTTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTCGCG  >  NC_000913/2437546‑2437815

ggaggaGAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTc                                                                                                                                    >  2:1128319/1‑140 (MQ=255)

  aggagAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCt                                                                                                                                  >  2:989208/1‑140 (MQ=255)

  aggagAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCt                                                                                                                                  >  2:1150142/1‑140 (MQ=255)

  aggagAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCt                                                                                                                                  >  1:1513642/1‑140 (MQ=255)

  aggagAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGAAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCt                                                                                                                                  <  2:805977/140‑1 (MQ=255)

    gagaAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGc                                                                                                                                >  1:1730748/1‑140 (MQ=255)

     agaAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGcc                                                                                                                               >  2:682655/1‑140 (MQ=255)

              atTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGat                                                                                                                      >  1:180001/1‑140 (MQ=255)

              atTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGat                                                                                                                      <  1:2027091/140‑1 (MQ=255)

               ttCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGatt                                                                                                                     >  2:278460/1‑140 (MQ=255)

               ttCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGatt                                                                                                                     >  1:1721468/1‑140 (MQ=255)

               ttCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGatt                                                                                                                     >  1:960043/1‑140 (MQ=255)

                tCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattc                                                                                                                    <  1:1048526/140‑1 (MQ=255)

                tCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattc                                                                                                                    >  2:2113703/1‑140 (MQ=255)

                tCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattc                                                                                                                    <  1:423574/140‑1 (MQ=255)

                tCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAACAAAGattc                                                                                                                    <  2:2173659/140‑1 (MQ=255)

                  caccacCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattcat                                                                                                                  <  1:1128319/140‑1 (MQ=255)

                    ccaccGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattcattc                                                                                                                >  1:1226343/1‑140 (MQ=255)

                    ccaccGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattcattc                                                                                                                <  1:379844/140‑1 (MQ=255)

                    ccaccGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGattcattc                                                                                                                <  2:910520/140‑1 (MQ=255)

                     caccGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTg                                                                                                                                 <  1:1863189/122‑1 (MQ=255)

                     caccGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTg                                                                                                                                 >  2:1863189/1‑122 (MQ=255)

                     caccGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGAttcattca                                                                                                               >  2:810140/1‑140 (MQ=255)

                      accGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCAc                                                                                                              >  1:514683/1‑140 (MQ=255)

                          cAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTc                                                                                                          >  1:2275124/1‑140 (MQ=255)

                          cAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTc                                                                                                          >  1:1827679/1‑140 (MQ=255)

                          cAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTc                                                                                                          >  1:739692/1‑140 (MQ=255)

                             tCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTg                                                                                                       >  2:965093/1‑140 (MQ=255)

                             ccGCATTACAGCCAGGTGCAGCGGAAAACCCAATCCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTg                                                                                                       <  2:374356/139‑1 (MQ=255)

                               gCATTACAGCCAGGTGCAGCGGAAAACCCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGAc                                                                                                     <  2:1340607/140‑1 (MQ=255)

                               gCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGAc                                                                                                     >  1:1929230/1‑140 (MQ=255)

                               gCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGAc                                                                                                     >  1:1841846/1‑140 (MQ=255)

                                 aTTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCg                                                                                                   <  1:281415/140‑1 (MQ=255)

                                  ttACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGa                                                                                                  >  2:2358312/1‑140 (MQ=255)

                                   tACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGaa                                                                                                 <  2:1513642/140‑1 (MQ=255)

                                         cAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCAcc                                                                                           <  2:2315122/140‑1 (MQ=255)

                                           ggTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCAt                                                                                         >  1:2059304/1‑140 (MQ=255)

                                           ggTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCAt                                                                                         >  1:991329/1‑140 (MQ=255)

                                               cAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGaa                                                                                                 >  1:606620/1‑128 (MQ=255)

                                                  cGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAGCAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCa                                                                                  >  2:124814/1‑140 (MQ=255)

                                                  cGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCa                                                                                  >  1:748705/1‑140 (MQ=255)

                                                    gAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATc                                                                                >  2:463506/1‑140 (MQ=255)

                                                             aTTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGc                                                                       <  2:48475/140‑1 (MQ=255)

                                                             aTTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGc                                                                       <  2:837114/140‑1 (MQ=255)

                                                             aTTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGc                                                                       <  1:965093/140‑1 (MQ=255)

                                                               tCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCa                                                                     >  2:242698/1‑140 (MQ=255)

                                                                    ccTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGa                                                                >  2:2041626/1‑140 (MQ=255)

                                                                        cTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGa                                                            >  1:513298/1‑140 (MQ=255)

                                                                        cTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGa                                                            <  1:1888966/140‑1 (MQ=255)

                                                                        cTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGa                                                            <  2:1841846/140‑1 (MQ=255)

                                                                        cTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGa                                                            <  2:1929230/140‑1 (MQ=255)

                                                                           cAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTACCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACgg                                                         >  1:2314706/1‑140 (MQ=255)

                                                                                  gCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTgg                                                  >  1:1094738/1‑140 (MQ=255)

                                                                                  gCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTgg                                                  >  1:1182416/1‑140 (MQ=255)

                                                                                  gCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTgg                                                  >  1:1420179/1‑140 (MQ=255)

                                                                                   cTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGa                                                 <  2:1721468/140‑1 (MQ=255)

                                                                                   cTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGa                                                 >  1:526748/1‑140 (MQ=255)

                                                                                   cTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGa                                                 <  2:1420179/140‑1 (MQ=255)

                                                                                   cTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGa                                                 <  1:2358312/140‑1 (MQ=255)

                                                                                   cTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGACTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGa                                                 >  2:2067721/1‑140 (MQ=255)

                                                                                       aTCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGcc                                             >  2:866926/1‑140 (MQ=255)

                                                                                         cGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCg                                           >  1:1811116/1‑140 (MQ=255)

                                                                                            cATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGa                                        >  2:792648/1‑140 (MQ=255)

                                                                                             aTGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGaa                                       >  1:14668/1‑140 (MQ=255)

                                                                                              tGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAAc                                      >  1:615934/1‑140 (MQ=255)

                                                                                               ggtcggtcCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAAcc                                     >  1:2385466/1‑140 (MQ=255)

                                                                                                gtcggtcCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACcg                                    >  2:1547442/1‑140 (MQ=255)

                                                                                                gtcggtcCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACcg                                    >  2:1918391/1‑140 (MQ=255)

                                                                                                  cggtcCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACcgcg                                  <  2:739692/140‑1 (MQ=255)

                                                                                                    gtcCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGt                                >  2:1471153/1‑140 (MQ=255)

                                                                                                    gtcCCCGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGt                                <  2:2330253/140‑1 (MQ=255)

                                                                                                       cccGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcac                             <  1:2041626/140‑1 (MQ=255)

                                                                                                       cccGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcac                             <  2:1811116/140‑1 (MQ=255)

                                                                                                         cGCAGTGGCAGTGCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcacct                           <  1:670397/140‑1 (MQ=255)

                                                                                                          gcagtggcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcacctc                          >  2:1073877/1‑140 (MQ=255)

                                                                                                          gcagtggcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcacctc                          >  2:281204/1‑140 (MQ=255)

                                                                                                               ggcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCa                     <  2:526748/140‑1 (MQ=255)

                                                                                                               ggcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCa                     <  1:1709222/140‑1 (MQ=255)

                                                                                                               ggcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCa                     <  1:811262/140‑1 (MQ=255)

                                                                                                                gcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCaa                    >  2:1761753/1‑140 (MQ=255)

                                                                                                                gcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCaa                    >  2:1404127/1‑140 (MQ=255)

                                                                                                                gcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCaa                    <  1:615908/140‑1 (MQ=255)

                                                                                                                gcagtgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCaa                    <  2:516939/140‑1 (MQ=255)

                                                                                                                    tgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcac                             <  2:248374/127‑1 (MQ=255)

                                                                                                                    tgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGtcac                             >  1:248374/1‑127 (MQ=255)

                                                                                                                    tgCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACgg                <  2:2134700/140‑1 (MQ=255)

                                                                                                                     gCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACgg                >  2:1609847/1‑139 (MQ=255)

                                                                                                                     gCCAACAAATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACgg                <  1:1609847/139‑1 (MQ=255)

                                                                                                                          caaATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCaaa                   <  1:1334822/131‑1 (MQ=255)

                                                                                                                          caaATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCaaa                   >  2:1334822/1‑131 (MQ=255)

                                                                                                                          caaATTTAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAAt          <  1:463506/140‑1 (MQ=255)

                                                                                                                               ttAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTc     >  2:1956211/1‑140 (MQ=255)

                                                                                                                                tAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGTGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcg    <  1:2154254/140‑1 (MQ=255)

                                                                                                                                tAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcg    <  2:513298/140‑1 (MQ=255)

                                                                                                                                tAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcg    <  2:704005/140‑1 (MQ=255)

                                                                                                                                tAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcg    <  2:2059304/140‑1 (MQ=255)

                                                                                                                                tAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcg    <  2:1182416/140‑1 (MQ=255)

                                                                                                                                tAATGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcg    <  1:1770029/140‑1 (MQ=255)

                                                                                                                                  aTGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcgcg  >  1:941984/1‑140 (MQ=255)

                                                                                                                                  aTGGGCTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTcgc   <  1:1481622/139‑1 (MQ=255)

GGAGGAGAAAACATATTCCACCACCGCAATCGCATTACAGCCAGGTGCAGCGGAAAAACCAATTCCCGCCTGCTTCAACCATGCTTCATCGACATGGTCGGTCCCCGCAGTGGCAGTGCCAACAAATTTAATGGGTTTTCCTGCCAGCAAAGATTCATTCACTTTCGTGACCGAACGCACCATCAGCGCATCCGCGTCTGCCAGTTGAGCGACGGGGATTGGACGCCCGGGAACCGCGGTCACCTCACCCAAACGGCTAAATAAGTCGCG  >  NC_000913/2437546‑2437815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A