Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,615,271 |
T→C |
E204G (GAG→GGG) |
yfgO ← |
putative transporter YfgO |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,615,271 | 0 | T | C | 100.0%
| 457.1
/ NA
| 127 | E204G (GAG→GGG) | yfgO | putative transporter YfgO |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/63); total (64/63) |
Only 100 of 128 total aligned reads displayed.
CCGAGAAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCTCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCTATGGTCAGC > NC_000913/2615134‑2615405
|
gagaAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCtt > 1:1875844/1‑140 (MQ=255)
gagaAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCtt > 2:1339265/1‑140 (MQ=255)
gagaAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCtt > 2:1843423/1‑140 (MQ=255)
agaAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTc < 1:897267/140‑1 (MQ=255)
gaAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTcc > 2:1976104/1‑140 (MQ=255)
gaAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTcc > 2:1909573/1‑140 (MQ=255)
aGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCcac < 2:2071323/140‑1 (MQ=255)
gCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCcaca < 2:1133762/140‑1 (MQ=255)
gCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCcaca < 2:1588841/140‑1 (MQ=255)
gCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCcaca < 2:1764058/140‑1 (MQ=255)
gCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAACAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCcaca < 2:1792345/140‑1 (MQ=255)
aCCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTc > 1:1815199/1‑132 (MQ=255)
aCCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTc < 2:1815199/132‑1 (MQ=255)
aCCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTg < 1:140550/140‑1 (MQ=255)
cAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTc < 1:101644/140‑1 (MQ=255)
aCTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGc < 1:2134538/140‑1 (MQ=255)
tGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCa < 2:172472/140‑1 (MQ=255)
ccAGCAGCAGCTAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGc > 1:2059229/1‑140 (MQ=255)
ccAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGc < 2:1986345/136‑1 (MQ=255)
ccAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGc > 1:1986345/1‑136 (MQ=255)
ccAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGc > 2:1467346/1‑140 (MQ=255)
agagCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGa > 1:664442/1‑140 (MQ=255)
agagCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGa > 1:2212518/1‑140 (MQ=255)
gCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATTTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACg < 1:1037993/140‑1 (MQ=255)
gCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACg < 2:1725765/140‑1 (MQ=255)
cAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACgg > 2:1229016/1‑140 (MQ=255)
aaCCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGtt < 2:1875844/140‑1 (MQ=255)
aCCCGAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTc < 2:1815811/140‑1 (MQ=255)
agccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCAt > 2:750397/1‑140 (MQ=255)
agccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCAt < 1:62054/140‑1 (MQ=255)
agccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCAt < 2:2315083/140‑1 (MQ=255)
agccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCAt < 1:1747761/140‑1 (MQ=255)
agccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCAt > 2:2225877/1‑140 (MQ=255)
agccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCAt < 1:1976104/140‑1 (MQ=255)
gccagGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATc < 1:2225877/140‑1 (MQ=255)
ggTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGct > 2:1319837/1‑140 (MQ=255)
ggCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCCTCTGCTCtt < 2:353697/140‑1 (MQ=255)
ggCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCtt < 1:1909573/140‑1 (MQ=255)
aTCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTc > 1:828664/1‑140 (MQ=255)
cccACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCttt < 2:671934/140‑1 (MQ=255)
cccACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGCCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCttt < 1:1707573/140‑1 (MQ=255)
ccaccaCGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTc < 1:2301246/140‑1 (MQ=255)
caccacGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTca > 2:1468131/1‑140 (MQ=255)
ccacGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGct < 2:376546/126‑1 (MQ=255)
ccacGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTcagc < 2:828664/140‑1 (MQ=255)
ccacGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTcagc < 1:1229016/140‑1 (MQ=255)
ccacGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTcagc < 1:1106368/140‑1 (MQ=255)
cGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAgg < 1:1444707/140‑1 (MQ=255)
gATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGga > 1:1621414/1‑140 (MQ=255)
gATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCAAGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGga > 2:878025/1‑140 (MQ=255)
atcatcTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGgaa > 1:216897/1‑140 (MQ=255)
tcatcTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGgaag > 2:900187/1‑140 (MQ=255)
tcatcTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGgaag < 1:1319837/140‑1 (MQ=255)
tctcCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGaagaag < 2:1813590/140‑1 (MQ=255)
tctcCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCAAGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGaagaag < 1:878025/140‑1 (MQ=255)
tcCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGAc > 2:1277909/1‑140 (MQ=255)
cAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCa > 1:1498604/1‑140 (MQ=255)
aGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGgaagaa < 2:543947/134‑1 (MQ=255)
aGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGgaagaa > 1:543947/1‑134 (MQ=255)
aGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCAt > 1:2278938/1‑140 (MQ=255)
aGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCAt > 1:2308372/1‑140 (MQ=255)
aGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCAt > 1:814948/1‑140 (MQ=255)
cACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTGTTTGGCTTTCTGCAGGTAGAAAACCATCa > 2:1683097/1‑140 (MQ=255)
cACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCa > 1:2390400/1‑140 (MQ=255)
tttGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATg > 2:722231/1‑140 (MQ=255)
tGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGgaag < 2:1188730/125‑1 (MQ=255)
tGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgc < 1:1818676/140‑1 (MQ=255)
tGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgc > 1:1331971/1‑140 (MQ=255)
tGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgc > 1:1577702/1‑140 (MQ=255)
tGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgc > 2:883949/1‑140 (MQ=255)
tGCCGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgc > 2:1533124/1‑140 (MQ=255)
ccGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcac < 1:373718/140‑1 (MQ=255)
ccGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcac < 2:814948/140‑1 (MQ=255)
ccGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcac > 2:1096206/1‑140 (MQ=255)
ccGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcac < 2:2059229/140‑1 (MQ=255)
ccGCGGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcac < 2:2212518/140‑1 (MQ=255)
cgcgGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTATTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcacc < 1:1769870/140‑1 (MQ=255)
cgGATATAGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcaccag > 2:426801/1‑140 (MQ=255)
ataGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcacca > 2:1586674/1‑134 (MQ=255)
ataGTTGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcacca < 1:1586674/134‑1 (MQ=255)
ttGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATa < 1:2293142/140‑1 (MQ=255)
ttGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATa < 2:1001440/140‑1 (MQ=255)
ttGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATa < 2:1498604/140‑1 (MQ=255)
ttGGTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATa < 1:426801/140‑1 (MQ=255)
ggTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcaccagca < 2:1232742/131‑1 (MQ=255)
ggTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcaccagca > 1:1232742/1‑131 (MQ=255)
ggTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGa < 2:2278938/140‑1 (MQ=255)
ggTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGa < 2:652522/140‑1 (MQ=255)
ggTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGa < 2:664442/140‑1 (MQ=255)
ggTGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGa > 1:575263/1‑140 (MQ=255)
gTGATTTGTTGATTCATCCCCTTCCACACCTATCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGAc > 1:564038/1‑140 (MQ=255)
tGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACg > 1:559116/1‑140 (MQ=255)
tGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACg > 1:1177681/1‑140 (MQ=255)
tGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACg > 2:1509016/1‑140 (MQ=255)
tGATTTGTTGATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAACACCAGATAGa < 2:1628545/138‑1 (MQ=255)
ttgttgATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCt < 2:2259105/139‑1 (MQ=255)
ttgttgATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCTa > 2:2399748/1‑140 (MQ=255)
ttgttgATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCTa > 1:2381999/1‑140 (MQ=255)
gttgATTCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCTATg > 2:378824/1‑140 (MQ=255)
tCATCCCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCTATGGTCAGc > 1:1444205/1‑140 (MQ=255)
|
CCGAGAAGCCGACCAGCACTGCCAGCAGCAGCGAATAGTTCAGCCCGAAGAGCAAGAACCCCAGCCAGGTGGCGATCCCCACCACGATCATCTCCAGCACTTTGCCGCGGATATAGTTGGTGATTTGTTGATTCATCTCCTTCCACACCTGTCCTGCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAGCACCAGATAGACGGCTATGGTCAGC > NC_000913/2615134‑2615405
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
