Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F28 I1 R1	258	142.3	4824480	99.1%	4781059	138.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,675,097	T→C	D222G (GAT→GGT)	yphC ←	putative zinc‑binding dehydrogenase YphC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,675,097	0	T	C	100.0%	388.3 / NA	107	D222G (GAT→GGT)	yphC	putative zinc‑binding dehydrogenase YphC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (48/59); total (48/59)

Only 100 of 110 total aligned reads displayed.

CCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCACGTT  >  NC_000913/2674961‑2675233

ccAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCa                                                                                                                                       <  1:2365093/140‑1 (MQ=255)

 cAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAGTCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      <  1:1678379/140‑1 (MQ=255)

 cAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      <  1:1475263/140‑1 (MQ=255)

 cAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      >  1:934978/1‑140 (MQ=255)

 cAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      <  2:1951276/140‑1 (MQ=255)

 cAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      <  2:263445/140‑1 (MQ=255)

  aGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATc                                                                                                                                     <  1:1646909/140‑1 (MQ=255)

  aGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATc                                                                                                                                     <  2:71820/140‑1 (MQ=255)

   gTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCa                                                                                                                                    <  1:1627354/140‑1 (MQ=255)

    tCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      <  2:430421/137‑1 (MQ=255)

    tCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCAt                                                                                                                                      >  1:430421/1‑137 (MQ=255)

       gCGGTGGATAGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCAcccc                                                                                                                                >  1:2067459/1‑140 (MQ=255)

        cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCt                                                                                                                               >  2:2206867/1‑140 (MQ=255)

        cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCt                                                                                                                               >  1:2226219/1‑140 (MQ=255)

        cGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCt                                                                                                                               >  1:1093348/1‑140 (MQ=255)

          gTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTaa                                                                                                                             <  1:1263790/140‑1 (MQ=255)

          gTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTaa                                                                                                                             <  1:217495/140‑1 (MQ=255)

             gATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATc                                                                                                                                     <  2:582438/129‑1 (MQ=255)

                  cAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTg                                                                                                                     <  1:2145902/140‑1 (MQ=255)

                   aGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGc                                                                                                                    <  2:487045/140‑1 (MQ=255)

                   aGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGc                                                                                                                    <  1:587421/140‑1 (MQ=255)

                    gTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGcc                                                                                                                   <  1:1173785/140‑1 (MQ=255)

                    gTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGcc                                                                                                                   <  1:465989/140‑1 (MQ=255)

                     tGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGcc                                                                                                                   >  1:1884104/1‑139 (MQ=255)

                     tGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGcc                                                                                                                   <  2:1884104/139‑1 (MQ=255)

                       ccAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATc                                                                                                                >  1:1437812/1‑140 (MQ=255)

                       ccAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATc                                                                                                                >  1:914172/1‑140 (MQ=255)

                       ccAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATc                                                                                                                >  1:1895271/1‑140 (MQ=255)

                         aGCAAGCGACCTGCGGCATTACTGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGTTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGc                                                                                                              >  2:1658392/1‑140 (MQ=255)

                             aGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGa                                                                                                          <  2:2369633/140‑1 (MQ=255)

                               cGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACg                                                                                                        >  2:1154948/1‑140 (MQ=255)

                                 aCCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATc                                                                                                                <  1:1307047/130‑1 (MQ=255)

                                 aCCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATc                                                                                                                >  2:1307047/1‑130 (MQ=255)

                                 aCCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGtt                                                                                                      >  2:714253/1‑140 (MQ=255)

                                 aCCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGtt                                                                                                      >  2:1841800/1‑140 (MQ=255)

                                 aCCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGtt                                                                                                      <  2:1895271/140‑1 (MQ=255)

                                  ccTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTc                                                                                                     <  2:1390653/140‑1 (MQ=255)

                                   cTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTcc                                                                                                    <  1:157433/140‑1 (MQ=255)

                                     gCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg                                                                                                  <  1:1792277/140‑1 (MQ=255)

                                     gCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCgg                                                                                                  <  1:278885/140‑1 (MQ=255)

                                      cGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGgc                                                                                                 >  2:131066/1‑140 (MQ=255)

                                        gCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGgcag                                                                                               <  1:1739067/140‑1 (MQ=255)

                                           ttACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCat                                                                                            <  1:1178037/140‑1 (MQ=255)

                                             aCCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCatat                                                                                          >  1:327375/1‑140 (MQ=255)

                                              ccGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATc                                                                                         >  1:1625403/1‑140 (MQ=255)

                                              ccGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATc                                                                                         >  1:1363310/1‑140 (MQ=255)

                                              ccGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATc                                                                                         <  1:214136/140‑1 (MQ=255)

                                               cGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCa                                                                                        <  2:1093348/140‑1 (MQ=255)

                                                   aCAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGc                                                                                    <  2:247643/140‑1 (MQ=255)

                                                   aCAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGc                                                                                    <  2:2067459/140‑1 (MQ=255)

                                                     aaTCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCg                                                                                  <  1:1658392/140‑1 (MQ=255)

                                                     aaTCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCg                                                                                  <  1:1785116/140‑1 (MQ=255)

                                                       tCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCgat                                                                                >  2:813261/1‑140 (MQ=255)

                                                       tCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCgat                                                                                >  1:1612831/1‑140 (MQ=255)

                                                       tCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCgat                                                                                >  1:679677/1‑140 (MQ=255)

                                                        cGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGGCCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCgatg                                                                               >  2:1320740/1‑140 (MQ=255)

                                                        cGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCgatg                                                                               >  1:176691/1‑140 (MQ=255)

                                                         gAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCgatga                                                                              >  1:1693020/1‑140 (MQ=255)

                                                                 cATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGtttt                                                                      <  1:1512213/140‑1 (MQ=255)

                                                                        gcCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACcgc                                                               <  1:1154948/140‑1 (MQ=255)

                                                                         ccACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACcgcg                                                              >  1:757770/1‑140 (MQ=255)

                                                                           aCCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGAc                                                            >  2:245041/1‑140 (MQ=255)

                                                                             cGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCt                                                          <  1:1142322/140‑1 (MQ=255)

                                                                             cGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCt                                                          >  2:318019/1‑140 (MQ=255)

                                                                                    gAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCa                                                   >  2:2083391/1‑140 (MQ=255)

                                                                                    gAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCa                                                   <  2:1037733/140‑1 (MQ=255)

                                                                                      gTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGc                                                 >  1:2118882/1‑140 (MQ=255)

                                                                                      gTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGc                                                 >  1:1821640/1‑140 (MQ=255)

                                                                                      gTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGc                                                 >  2:191517/1‑140 (MQ=255)

                                                                                      gTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGc                                                 >  2:2301334/1‑140 (MQ=255)

                                                                                       ttCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGca                                                >  2:64724/1‑140 (MQ=255)

                                                                                       ttCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGca                                                <  2:1821640/140‑1 (MQ=255)

                                                                                        tCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGcat                                               <  2:333393/140‑1 (MQ=255)

                                                                                         cGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGcatc                                              >  1:383224/1‑140 (MQ=255)

                                                                                           gCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGcatcat                                            <  1:2335734/140‑1 (MQ=255)

                                                                                             gATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCg                                          <  2:327375/140‑1 (MQ=255)

                                                                                               tAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGTCCTTTCGCCAGCATCATCGcc                                        <  1:1268167/140‑1 (MQ=255)

                                                                                               tAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGcc                                        <  1:318019/140‑1 (MQ=255)

                                                                                                          aGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGAc                             <  1:813261/140‑1 (MQ=255)

                                                                                                          aGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGAc                             <  1:1015746/140‑1 (MQ=255)

                                                                                                          aGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGAc                             <  2:1693020/140‑1 (MQ=255)

                                                                                                          aGACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGAc                             <  2:757770/140‑1 (MQ=255)

                                                                                                           gACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACt                            <  2:2226219/140‑1 (MQ=255)

                                                                                                           gACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACt                            >  2:2342036/1‑140 (MQ=255)

                                                                                                           gACCTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACt                            >  1:1529410/1‑140 (MQ=255)

                                                                                                              cTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGc                         >  1:340055/1‑140 (MQ=255)

                                                                                                              cTTCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGc                         >  1:651788/1‑140 (MQ=255)

                                                                                                               ttCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGcc                        <  1:1320740/140‑1 (MQ=255)

                                                                                                                tCGGTGGTTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGccc                       >  1:1959288/1‑140 (MQ=255)

                                                                                                                    tggtTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAga                   <  2:340055/140‑1 (MQ=255)

                                                                                                                    tggtTGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAga                   <  2:651788/140‑1 (MQ=255)

                                                                                                                        tGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAgaccga               >  1:1964670/1‑140 (MQ=255)

                                                                                                                        tGCTAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAgaccga               >  1:2357946/1‑140 (MQ=255)

                                                                                                                           tAAATAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGacca            <  2:1363310/140‑1 (MQ=255)

                                                                                                                               tAGCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAg        <  2:1529410/140‑1 (MQ=255)

                                                                                                                                 gCCGTGACCCGTCACCCCTAACTG‑TTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCAc     >  2:627024/1‑140 (MQ=255)

                                                                                                                                 gCCGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCa      <  1:1197385/140‑1 (MQ=255)

                                                                                                                                  ccGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCAc     >  1:1759805/1‑140 (MQ=255)

                                                                                                                                  ccGTGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCAc     >  2:591339/1‑140 (MQ=255)

                                                                                                                                     tGACCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCACGtt  <  2:679677/140‑1 (MQ=255)

CCAGTCAGCGGTGGATTGCAGTGCCAGCAAGCGACCTGCGGCATTACCGGAACAATCGAGCGCAACATCCGCGCCACCGTGGGTGAGTTCGGCGATAATCTGCGGCAGACCTTCGGTGGTTGCTAAATAGCCGTGATCCATCACCCCTAACTGTTTTGCCATCGCCAGACGTTCCGGCAGCATATCAACGCCGATGATCCGTTTTGCACCGCGACCTTTCGCCAGCATCATCGCCATCATGCCGACTGGCCCCAGACCGACCACCAGCACGTT  >  NC_000913/2674961‑2675233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A