Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 260 73.5 2514320 99.3% 2496719 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,680,452 G→A A765V (GCC→GTC)  yphG ← DUF5107 domain‑containing protein YphG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,680,4520GA100.0% 241.9 / NA 68A765V (GCC→GTC) yphGDUF5107 domain‑containing protein YphG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (33/35);  total (33/35)

CGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGG  >  NC_000913/2680316‑2680583
                                                                                                                                        |                                                                                                                                   
cggcgCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACaa                                                                                                                                  >  1:40700/1‑140 (MQ=255)
cggcgCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCCTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACag                                                                                                                                  >  2:767440/1‑139 (MQ=255)
 ggcgCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAAt                                                                                                                                 <  1:18412/140‑1 (MQ=255)
  gcgcAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATg                                                                                                                                >  1:1079773/1‑140 (MQ=255)
     cAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCt                                                                                                                             <  1:663199/140‑1 (MQ=255)
     cAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCt                                                                                                                             <  1:164145/140‑1 (MQ=255)
      aaGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCtt                                                                                                                            <  2:752615/140‑1 (MQ=255)
           gATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTttgttg                                                                                                                       <  1:148458/140‑1 (MQ=255)
             tAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCCTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAGTGGCTTTGTTGTa                                                                                                                     <  1:767440/140‑1 (MQ=255)
                   ttATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACg                                                                                                               <  1:578708/140‑1 (MQ=255)
                   ttATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACg                                                                                                               >  2:267138/1‑140 (MQ=255)
                    tATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGt                                                                                                              >  1:38677/1‑140 (MQ=255)
                    tATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGt                                                                                                              >  1:1183899/1‑140 (MQ=255)
                     aTCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGtt                                                                                                             <  2:801659/140‑1 (MQ=255)
                      tCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCt                                                                                                                             <  2:1191033/123‑1 (MQ=255)
                      tCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCt                                                                                                                             >  1:1191033/1‑123 (MQ=255)
                       cAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttg                                                                                                           >  2:421921/1‑140 (MQ=255)
                        aaGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttgt                                                                                                          <  2:987431/140‑1 (MQ=255)
                          gATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttgttg                                                                                                        <  1:421921/140‑1 (MQ=255)
                           aTAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCt                                                                                                                  <  1:305819/129‑1 (MQ=255)
                           aTAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCt                                                                                                                  >  2:305819/1‑129 (MQ=255)
                            tAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttgtt                                                                                                         <  2:1227442/137‑1 (MQ=255)
                            tAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttgtt                                                                                                         >  1:1227442/1‑137 (MQ=255)
                               cgcgcgGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTgtagta                                                                                                   >  2:960364/1‑140 (MQ=255)
                               cgcgcgGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTgtagta                                                                                                   >  2:846226/1‑140 (MQ=255)
                                gcgcgGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGtagtag                                                                                                  >  1:128392/1‑140 (MQ=255)
                                   cgGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGaag                                                                                               <  2:1079773/140‑1 (MQ=255)
                                    ggCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttg                                                                                                           <  2:819177/127‑1 (MQ=255)
                                    ggCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTttg                                                                                                           >  1:819177/1‑127 (MQ=255)
                                     gCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGaagca                                                                                             <  2:253674/140‑1 (MQ=255)
                                     gCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGaagca                                                                                             <  2:38677/140‑1 (MQ=255)
                                          cTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTa                                                                                        >  1:263504/1‑140 (MQ=255)
                                               aaTCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCC‑AAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGaa                                                                                                <  1:977833/126‑1 (MQ=255)
                                               aaTCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCC‑AAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGaa                                                                                                >  2:977833/1‑126 (MQ=255)
                                                 tCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATg                                                                                 <  1:294099/140‑1 (MQ=255)
                                                     gtTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGa                                                                             >  2:1240878/1‑140 (MQ=255)
                                                      ttGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAg                                                                            <  2:128392/140‑1 (MQ=255)
                                                                cACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCa                                                                  <  1:267138/140‑1 (MQ=255)
                                                                cACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCa                                                                  <  1:960364/140‑1 (MQ=255)
                                                                cACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCa                                                                  <  2:1183899/140‑1 (MQ=255)
                                                                  cGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCAct                                                                >  1:227408/1‑140 (MQ=255)
                                                                  cGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCAct                                                                <  1:1240878/140‑1 (MQ=255)
                                                                     aTGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCtt                                                             <  2:40700/140‑1 (MQ=255)
                                                                       ggATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAg                                                                            >  1:698999/1‑123 (MQ=255)
                                                                       ggATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAg                                                                            <  2:698999/123‑1 (MQ=255)
                                                                        gATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAg                                                                    <  2:942175/130‑1 (MQ=255)
                                                                        gATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAg                                                                    >  1:942175/1‑130 (MQ=255)
                                                                             cTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATActc                                                     >  2:894942/1‑140 (MQ=255)
                                                                               aaCCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAg                                                                    >  1:1030369/1‑123 (MQ=255)
                                                                               aaCCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAg                                                                    <  2:1030369/123‑1 (MQ=255)
                                                                                 cccGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCa                                                 >  2:134081/1‑140 (MQ=255)
                                                                                     cgcCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAgcgc                                             >  2:1160447/1‑140 (MQ=255)
                                                                                     cgcCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAgcgc                                             >  1:599132/1‑140 (MQ=255)
                                                                                     cgcCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAgcgc                                             >  1:931230/1‑140 (MQ=255)
                                                                                     cgcCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAgcgc                                             >  1:124328/1‑140 (MQ=255)
                                                                                     cgcCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAgcgc                                             >  2:21473/1‑140 (MQ=255)
                                                                                       ccAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGcgccg                                           <  2:263504/140‑1 (MQ=255)
                                                                                          gCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCa                                        >  2:100971/1‑140 (MQ=255)
                                                                                                      cTCCGGCGACATCTCTACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCg                            <  1:134081/140‑1 (MQ=255)
                                                                                                                     tACGCAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGa             <  1:894942/140‑1 (MQ=255)
                                                                                                                         cAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGaaa                 >  1:301840/1‑132 (MQ=255)
                                                                                                                         cAACGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGaaa                 <  2:301840/132‑1 (MQ=255)
                                                                                                                            cGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTc                       >  2:1182003/1‑123 (MQ=255)
                                                                                                                            cGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTc                       <  1:1182003/123‑1 (MQ=255)
                                                                                                                            cGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTg      >  1:133425/1‑140 (MQ=255)
                                                                                                                            cGTTGCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTg      >  1:649058/1‑140 (MQ=255)
                                                                                                                                gCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCggg  <  2:665480/140‑1 (MQ=255)
                                                                                                                                gCCAAAAGACAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCggg  <  1:846226/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                   
CGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGG  >  NC_000913/2680316‑2680583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A