Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,891,910 |
T→C |
intergenic (‑12/‑304) |
cysJ ← / → queD |
sulfite reductase, flavoprotein subunit/6‑carboxy‑5,6,7,8‑tetrahydropterin synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,891,910 | 0 | T | C | 100.0%
| 568.1
/ NA
| 156 | intergenic (‑12/‑304) | cysJ/queD | sulfite reductase, flavoprotein subunit/6‑carboxy‑5,6,7,8‑tetrahydropterin synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/86); total (70/86) |
Only 100 of 157 total aligned reads displayed.
CCCCAGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGTTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTAACCTGTTTTAG > NC_000913/2891774‑2892045
|
ccccAGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTcc > 2:923470/1‑140 (MQ=255)
ccccAGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTAGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTcc > 2:296371/1‑140 (MQ=255)
ccccAGAAATAGCCAGAAACCCAGGCAAGCTGGGCGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTcc > 2:718636/1‑140 (MQ=255)
cccAGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCa < 2:445425/140‑1 (MQ=255)
cccAGAAATAGCCAGAAACCCAGGCAAGCTGGGAGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCa > 1:565407/1‑140 (MQ=255)
cAGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTAGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGt < 1:296371/140‑1 (MQ=255)
aGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTGTGCTCCAGTa > 1:1653106/1‑140 (MQ=255)
aGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTa > 2:1573657/1‑140 (MQ=255)
aGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTa > 1:170751/1‑140 (MQ=255)
aaaTAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAg < 2:808121/140‑1 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAg > 2:1614919/1‑135 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 2:1341448/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 1:638345/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 1:933827/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 2:1945438/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 2:2070416/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 2:1121062/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 2:477768/1‑140 (MQ=255)
gCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAg > 2:53100/1‑140 (MQ=255)
aGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTgcg < 2:771850/140‑1 (MQ=255)
aGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTgcg > 1:1339393/1‑140 (MQ=255)
gCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGcc < 2:2287636/140‑1 (MQ=255)
gCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGcc < 1:1573657/140‑1 (MQ=255)
cAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGccc < 2:1144043/140‑1 (MQ=255)
cAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGccc < 1:2151445/140‑1 (MQ=255)
cAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGccc < 1:319561/140‑1 (MQ=255)
gCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGt > 2:1274696/1‑140 (MQ=255)
cTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTc > 1:347233/1‑140 (MQ=255)
ggtgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAgc < 2:1939067/140‑1 (MQ=255)
ggtgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAgc < 1:1945438/140‑1 (MQ=255)
ggtgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAgc < 1:582147/140‑1 (MQ=255)
ggtgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAgc < 1:1799029/140‑1 (MQ=255)
ggtgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAgc < 2:347233/140‑1 (MQ=255)
agtgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAgc < 2:42043/139‑1 (MQ=255)
tgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTg < 1:1518664/126‑1 (MQ=255)
tgggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTg > 2:1518664/1‑126 (MQ=255)
gggAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGcc < 1:815120/140‑1 (MQ=255)
gAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCa < 2:638345/140‑1 (MQ=255)
aGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCAt > 1:160933/1‑140 (MQ=255)
aGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCAt > 2:2051899/1‑140 (MQ=255)
aGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCAt > 1:726320/1‑140 (MQ=255)
gTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATa < 1:295889/140‑1 (MQ=255)
gTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATa < 2:1301019/140‑1 (MQ=255)
ttAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATaa < 1:1341448/140‑1 (MQ=255)
aaaTCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATaaaa > 2:639613/1‑140 (MQ=255)
aaaTCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATa < 1:1095014/137‑1 (MQ=255)
aaaTCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATa > 2:1095014/1‑137 (MQ=255)
gTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACagaag < 2:1078617/140‑1 (MQ=255)
gTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACagaag > 1:2331482/1‑140 (MQ=255)
gTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAACTGTTTCTGCGCCCTGTCAGCGCCCATAAAACagaag < 2:1424528/140‑1 (MQ=255)
tCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACagaaga < 2:359059/140‑1 (MQ=255)
cGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACagaagag < 1:477768/140‑1 (MQ=255)
ccgccTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGaaggt < 1:639613/140‑1 (MQ=255)
ccgccTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGaaggt < 1:1050328/140‑1 (MQ=255)
tGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACgggg > 2:2069819/1‑140 (MQ=255)
tGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACgggg > 2:1628548/1‑140 (MQ=255)
tGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACgggg > 2:2149086/1‑140 (MQ=255)
gCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGc > 1:424216/1‑140 (MQ=255)
cAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCaa < 2:2022766/140‑1 (MQ=255)
aGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCaaa < 2:1653106/140‑1 (MQ=255)
aGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCaaa > 2:2380248/1‑140 (MQ=255)
aGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCaaa < 1:1928141/140‑1 (MQ=255)
aGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCaaa < 1:718636/140‑1 (MQ=255)
aGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCaaa < 1:207307/140‑1 (MQ=255)
ttGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACg < 2:1607004/140‑1 (MQ=255)
tGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACgg > 1:2396894/1‑140 (MQ=255)
gCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGgt < 1:1274696/140‑1 (MQ=255)
cTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGgtg < 2:1650868/140‑1 (MQ=255)
cTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGgtg < 2:149093/140‑1 (MQ=255)
tCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGgtgt < 2:170751/140‑1 (MQ=255)
aaCGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAg > 2:1620148/1‑140 (MQ=255)
gCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGAt > 2:2229815/1‑140 (MQ=255)
gCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGAt < 2:2331482/140‑1 (MQ=255)
cAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATa < 2:2396894/140‑1 (MQ=255)
aCGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGc > 2:961258/1‑140 (MQ=255)
gcgGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGa < 2:242394/140‑1 (MQ=255)
cgGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGAt < 2:1820765/140‑1 (MQ=255)
ggAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATa > 2:54815/1‑140 (MQ=255)
aaGGTGGGACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAAc > 2:804578/1‑140 (MQ=255)
gggACCTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACtaata < 1:2149086/140‑1 (MQ=255)
cTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAAcc < 2:1401456/138‑1 (MQ=255)
cTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAAcc > 1:1401456/1‑138 (MQ=255)
cTGTGTCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCaa > 1:580490/1‑140 (MQ=255)
gtgtCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACtaata > 1:786028/1‑133 (MQ=255)
gtgtCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACtaata < 2:786028/133‑1 (MQ=255)
tgtCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGAt > 2:1745368/1‑124 (MQ=255)
tgtCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGAt < 1:1745368/124‑1 (MQ=255)
tgtCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATc > 1:1269739/1‑140 (MQ=255)
tgtCGTCATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATc > 2:732895/1‑140 (MQ=255)
tcgtcATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGa < 1:2240133/140‑1 (MQ=255)
tcgtcATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGa < 1:2051899/140‑1 (MQ=255)
tcgtcATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGa < 1:2056811/140‑1 (MQ=255)
gtcATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACt > 1:1414366/1‑140 (MQ=255)
cATGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTaa < 2:580701/140‑1 (MQ=255)
aTGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTAAc < 1:1620148/140‑1 (MQ=255)
aTGCGTCGTTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTAAc < 2:938257/140‑1 (MQ=255)
cgtcgtTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGAc > 2:335353/1‑133 (MQ=255)
cgtcgtTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGAc < 1:335353/133‑1 (MQ=255)
tcgtTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTAACCTGtt > 2:712751/1‑140 (MQ=255)
tcgtTATGCTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTAACCTGtt > 1:2027260/1‑140 (MQ=255)
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CCCCAGAAATAGCCAGAAACCCAGGCAAGCTGGGTGGGAGTTAAATCGGTCGTGGCCGCCTGAAGGCGTGCCAGTTGCTCCGGGTTCAACGGAAGCAACGCGGAAGGTGGGACCTGTGTCGTCATGCGTCGTTATGTTCCAGTAAGCAAAGCTGTTTCTGCGCCCTGTCAGCGCCCATAAAACAGAAGAGAAGGTAAGGTTAACGGGGCAAACGGTGTGGATTAAAGACGGGATAGCGATAACTAATAACCAAATCGACTAACCTGTTTTAG > NC_000913/2891774‑2892045
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
