Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F28 I1 R1	258	142.3	4824480	99.1%	4781059	138.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,321,393	T→C	D74G (GAC→GGC)	yhbX ←	putative hydrolase, inner membrane

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,321,393	0	T	C	100.0%	761.5 / NA	209	D74G (GAC→GGC)	yhbX	putative hydrolase, inner membrane
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/93); total (116/93)

Only 100 of 214 total aligned reads displayed.

CAAAGGCACATAGATAAGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGTCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGACTA  >  NC_000913/3321256‑3321528

cAAAGGCACATAGATAAGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCt                                                                                                                                       >  1:2356276/1‑140 (MQ=255)

 aaaGGCACATAGATAAGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTg                                                                                                                                      <  2:2330652/140‑1 (MQ=255)

      cacaTAGATAAGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGca                                                                                                                                 <  1:1779355/140‑1 (MQ=255)

      cacaTAGATAAGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGca                                                                                                                                 <  1:219705/140‑1 (MQ=255)

               aaGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAac                                                                                                                        >  2:1070187/1‑140 (MQ=255)

                  ggATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACC‑AAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACaa                                                                                                                    >  2:1971693/1‑140 (MQ=255)

                    atatACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACaaa                                                                                                                   <  1:841573/140‑1 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGcagtcagt                                                                                                                           <  2:467623/129‑1 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATgg                                                                                                                >  2:2231058/1‑140 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATgg                                                                                                                >  2:1542268/1‑140 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATgg                                                                                                                >  1:2120053/1‑140 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATgg                                                                                                                >  1:91011/1‑140 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATgg                                                                                                                >  2:135292/1‑140 (MQ=255)

                       taCATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCT‑ATACTCATGCCTGCCGCAGTCAGTAACACAAATGGt                                                                                                               >  1:868515/1‑140 (MQ=255)

                            ccccAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTg                                                                                                              >  1:1178094/1‑137 (MQ=255)

                            ccccAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCgg                                                                                                           >  1:1267408/1‑140 (MQ=255)

                            ccccAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCgg                                                                                                           >  1:451096/1‑140 (MQ=255)

                            ccccAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCgg                                                                                                           >  2:1334678/1‑140 (MQ=255)

                            ccccAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCgg                                                                                                           >  1:336215/1‑140 (MQ=255)

                             cccAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTAAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGc                                                                                                          >  1:1217094/1‑140 (MQ=255)

                               cAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGcaa                                                                                                        >  1:2312694/1‑140 (MQ=255)

                               cAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGcaa                                                                                                        >  2:1720109/1‑140 (MQ=255)

                               cAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGcaa                                                                                                        <  2:909654/140‑1 (MQ=255)

                                aGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGcaac                                                                                                       >  1:1014649/1‑140 (MQ=255)

                                 gCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGcaaca                                                                                                      >  2:1259377/1‑140 (MQ=255)

                                  cATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGcaacaa                                                                                                     >  1:1530233/1‑140 (MQ=255)

                                      ttGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAg                                                                                                 >  2:1472037/1‑140 (MQ=255)

                                       tGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAgg                                                                                                <  2:603967/140‑1 (MQ=255)

                                         aCAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCg                                                                                              <  2:523997/140‑1 (MQ=255)

                                            aCTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAg                                                                                           <  1:95036/140‑1 (MQ=255)

                                            aCTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAg                                                                                           <  2:654245/140‑1 (MQ=255)

                                            aCTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAg                                                                                           >  2:768860/1‑140 (MQ=255)

                                             cTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGc                                                                                          >  2:1429707/1‑140 (MQ=255)

                                                cATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGa                                                                                       <  1:1699906/140‑1 (MQ=255)

                                                    cGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAggg                                                                                   <  2:1302045/140‑1 (MQ=255)

                                                    cGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAggg                                                                                   <  1:1921344/140‑1 (MQ=255)

                                                    cGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAggg                                                                                   <  1:575253/140‑1 (MQ=255)

                                                        tCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGgatga                                                                               >  1:431388/1‑140 (MQ=255)

                                                          aCTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGata                                                                             <  1:703925/140‑1 (MQ=255)

                                                           ctctGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGatat                                                                            <  2:1014649/140‑1 (MQ=255)

                                                            tctGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGa                                                                                       <  1:2013691/128‑1 (MQ=255)

                                                            tctGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGAtata                                                                           >  2:579677/1‑140 (MQ=255)

                                                               ggAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGt                                                                        >  2:1907030/1‑140 (MQ=255)

                                                                gAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGtt                                                                       >  1:771059/1‑140 (MQ=255)

                                                                gAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGtt                                                                       >  2:744734/1‑140 (MQ=255)

                                                                 aGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGttt                                                                      <  2:666767/140‑1 (MQ=255)

                                                                 aGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGttt                                                                      <  1:1542268/140‑1 (MQ=255)

                                                                 aGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGttt                                                                      >  2:1190731/1‑140 (MQ=255)

                                                                   cacaCTAATCCCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTa                                                                    >  1:67158/1‑140 (MQ=255)

                                                                    acacTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTAc                                                                   >  1:732295/1‑140 (MQ=255)

                                                                      acTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACaa                                                                 >  2:75619/1‑140 (MQ=255)

                                                                      acTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACaa                                                                 >  1:1143971/1‑140 (MQ=255)

                                                                      acTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACaa                                                                 >  1:1258875/1‑140 (MQ=255)

                                                                      acTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACaa                                                                 <  1:1464618/140‑1 (MQ=255)

                                                                      acTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACaa                                                                 <  1:2231058/140‑1 (MQ=255)

                                                                        tAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAAcc                                                               >  2:1117677/1‑140 (MQ=255)

                                                                          aTCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAg                                                             >  2:432051/1‑140 (MQ=255)

                                                                           tCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGttt                                                                      <  2:272913/130‑1 (MQ=255)

                                                                           tCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGttt                                                                      >  1:272913/1‑130 (MQ=255)

                                                                           tCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAgg                                                            <  1:1907030/140‑1 (MQ=255)

                                                                                aaTCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGt                                                       >  1:1412360/1‑140 (MQ=255)

                                                                                aaTCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGt                                                       >  2:1840650/1‑140 (MQ=255)

                                                                                  tCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAgg                                                            <  2:1218956/133‑1 (MQ=255)

                                                                                  tCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCa                                                     >  2:2102118/1‑140 (MQ=255)

                                                                                    catcatTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGa                                                   >  2:1731909/1‑140 (MQ=255)

                                                                                       catTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACg                                                <  2:693096/140‑1 (MQ=255)

                                                                                             aaGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAAc                                          >  1:1001002/1‑140 (MQ=255)

                                                                                                 tGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCa                                      <  2:336215/140‑1 (MQ=255)

                                                                                                 tGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCa                                      >  2:399716/1‑140 (MQ=255)

                                                                                                 tGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCa                                      <  2:1913868/140‑1 (MQ=255)

                                                                                                 tGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCa                                      >  2:2077452/1‑140 (MQ=255)

                                                                                                   tACCAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACgaaga                                            >  2:2057000/1‑132 (MQ=255)

                                                                                                     ccAAAGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAgcg                                  <  2:1172366/140‑1 (MQ=255)

                                                                                                        aaGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTg                               >  1:767529/1‑140 (MQ=255)

                                                                                                         aGGTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGa                              <  1:2078278/140‑1 (MQ=255)

                                                                                                          ggTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGaa                             >  2:2046014/1‑140 (MQ=255)

                                                                                                          ggTACACCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGaa                             <  1:1069295/140‑1 (MQ=255)

                                                                                                               acCATGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCata                        >  2:136197/1‑140 (MQ=255)

                                                                                                                   tGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATgcg                    >  1:367339/1‑140 (MQ=255)

                                                                                                                   tGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATgcg                    >  2:2219055/1‑140 (MQ=255)

                                                                                                                   tGAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATgcg                    >  1:1105509/1‑140 (MQ=255)

                                                                                                                    gAATAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATgcgc                   <  2:1001002/140‑1 (MQ=255)

                                                                                                                     aaTAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCt                  >  2:2385335/1‑140 (MQ=255)

                                                                                                                     aaTAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCt                  >  1:1284883/1‑140 (MQ=255)

                                                                                                                     aaTAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCt                  >  2:627716/1‑140 (MQ=255)

                                                                                                                      aTAGAGGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTc                 >  2:293505/1‑140 (MQ=255)

                                                                                                                          agGCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGga             <  1:1731909/140‑1 (MQ=255)

                                                                                                                           ggCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGgaa            >  1:1043895/1‑140 (MQ=255)

                                                                                                                            gCTAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGgaag           <  2:91916/140‑1 (MQ=255)

                                                                                                                              tAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGgaagaa         <  1:293505/140‑1 (MQ=255)

                                                                                                                              tAATACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGgaagaa         <  1:627716/140‑1 (MQ=255)

                                                                                                                               aaTACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATg                      >  1:2264518/1‑126 (MQ=255)

                                                                                                                               aaTACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATg                      <  2:2264518/126‑1 (MQ=255)

                                                                                                                               aaTACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGaagaag        >  1:2138633/1‑140 (MQ=255)

                                                                                                                                 tACTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCg      >  2:96444/1‑140 (MQ=255)

                                                                                                                                  aCTCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGa     <  1:498353/140‑1 (MQ=255)

                                                                                                                                    tCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGACt   <  1:585876/140‑1 (MQ=255)

                                                                                                                                    tCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGACt   <  1:2046014/140‑1 (MQ=255)

                                                                                                                                    tCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGACt   <  1:762067/140‑1 (MQ=255)

                                                                                                                                    tCATGCCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGACt   <  2:2138633/140‑1 (MQ=255)

CAAAGGCACATAGATAAGGGATATACATCCCCAGCATTTTGACAACTTCATCCGGATCACTCTGGAGCACACTAATCGCAAATCCATCATTGAAAGTTGTACCAAAGGTACACCATGAATAGAGGCTAATACTCATGTCTGCCGCAGTCAGTAACACAAATGGTGCGGCAACAAGCAGGCGAAGCGGAAGGGATGATATACGTTTTACAACCAGGATGGTCAGAACGAAGAACAGCAAGCGCTGAACCATATGCGCTCCGGAAGAAGCGACTA  >  NC_000913/3321256‑3321528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A