Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,484,970 |
T→C |
W161R (TGG→CGG) |
prkB → |
putative phosphoribulokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,484,970 | 0 | T | C | 100.0%
| 693.1
/ NA
| 191 | W161R (TGG→CGG) | prkB | putative phosphoribulokinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (95/96); total (95/96) |
Only 100 of 194 total aligned reads displayed.
CCCTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGTGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTCCA > NC_000913/3484835‑3485106
|
cccTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGAt > 1:43363/1‑140 (MQ=255)
ccTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGAtt > 2:1571645/1‑140 (MQ=255)
cTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTc < 2:867398/140‑1 (MQ=255)
cTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTc < 2:2133575/140‑1 (MQ=255)
ggCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAACATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCaa < 1:379867/140‑1 (MQ=255)
tACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATc > 1:1774865/1‑140 (MQ=255)
aCCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATcc > 2:909911/1‑140 (MQ=255)
ccGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCcg > 1:547109/1‑140 (MQ=255)
ccGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCcg < 1:1868576/140‑1 (MQ=255)
cccACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGacac > 2:1099932/1‑140 (MQ=255)
aCTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGac < 2:1166366/135‑1 (MQ=255)
aCTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCag > 1:2389172/1‑140 (MQ=255)
tGATGTACTGTTCTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCagcg < 2:1937354/140‑1 (MQ=255)
tGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCagcgagc > 2:163110/1‑140 (MQ=255)
gTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCagcgagcg > 1:1400620/1‑140 (MQ=255)
gTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCagcgagcg < 2:453698/140‑1 (MQ=255)
aCTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGcgcg < 1:1622214/140‑1 (MQ=255)
cTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCgg < 2:1179134/140‑1 (MQ=255)
tGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCggg > 1:70421/1‑140 (MQ=255)
ttttATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCAGGCa > 2:375858/1‑140 (MQ=255)
tttATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCAc < 1:1015279/140‑1 (MQ=255)
ttATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACt > 2:2082763/1‑140 (MQ=255)
ttATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACt > 2:176337/1‑140 (MQ=255)
aTGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCa > 1:112324/1‑140 (MQ=255)
tGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCAc > 1:20520/1‑140 (MQ=255)
aGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACgag < 1:1767675/140‑1 (MQ=255)
gTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGaa > 1:1901433/1‑140 (MQ=255)
gTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGaa > 2:1791755/1‑140 (MQ=255)
gTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGaa > 2:1358182/1‑140 (MQ=255)
gTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGaa > 2:1299247/1‑140 (MQ=255)
tttagccggcggCTTAGTCACGCCACAGCATTACGTTGCGCAGCATGTGGCCTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCGCTCACGAGAAg < 2:2156918/134‑1 (MQ=255)
tttACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAg < 1:666706/140‑1 (MQ=255)
tACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCa < 2:1683419/140‑1 (MQ=255)
tACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCa < 1:1435052/140‑1 (MQ=255)
tACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCa > 2:2364604/1‑140 (MQ=255)
acGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTg < 2:1215445/140‑1 (MQ=255)
ggcggcGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGAt < 1:461925/140‑1 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg > 2:1989687/1‑140 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg > 2:252835/1‑140 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg > 2:28505/1‑140 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg < 2:70421/140‑1 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg > 2:2395089/1‑140 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg > 1:174349/1‑140 (MQ=255)
cggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATgg > 2:1111846/1‑140 (MQ=255)
ggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGa > 1:2332109/1‑140 (MQ=255)
ggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGa > 2:315873/1‑140 (MQ=255)
ggcgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGa > 1:1043576/1‑140 (MQ=255)
cgTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACt < 2:1484508/140‑1 (MQ=255)
gCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGc > 2:1747443/1‑140 (MQ=255)
ccACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCg > 1:901787/1‑140 (MQ=255)
acaGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGtt < 1:2082763/140‑1 (MQ=255)
aGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCa > 1:109435/1‑140 (MQ=255)
aTAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATg < 1:1960723/140‑1 (MQ=255)
aTAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATg < 1:1521697/140‑1 (MQ=255)
tAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGtt > 2:1424661/1‑134 (MQ=255)
tAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATgg < 1:1827383/140‑1 (MQ=255)
cGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAg < 1:1571645/140‑1 (MQ=255)
cGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAg < 1:164821/140‑1 (MQ=255)
gTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGa < 1:315873/140‑1 (MQ=255)
gTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGa < 2:1901433/140‑1 (MQ=255)
gTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGa < 2:682555/140‑1 (MQ=255)
tGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGa < 2:1843315/138‑1 (MQ=255)
tGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACt < 1:252835/140‑1 (MQ=255)
tGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACt < 1:2004205/140‑1 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATg > 2:725162/1‑131 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATg < 1:725162/131‑1 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGa > 1:627963/1‑136 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGa < 2:627963/136‑1 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACtat > 2:718928/1‑140 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACtat < 1:116815/140‑1 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACtat < 2:43363/140‑1 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACtat < 2:856520/140‑1 (MQ=255)
cgcAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACtat > 2:2237057/1‑140 (MQ=255)
gcagcaTGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACtata < 1:489477/140‑1 (MQ=255)
cagcaTGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTatat > 1:1681885/1‑140 (MQ=255)
agcaTGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATc < 1:718928/140‑1 (MQ=255)
caTGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCaa < 2:230716/140‑1 (MQ=255)
tgtgGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACt > 2:203994/1‑140 (MQ=255)
tACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATcaca > 1:320421/1‑140 (MQ=255)
tACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATcaca > 2:581729/1‑140 (MQ=255)
tACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATcaca > 1:972972/1‑140 (MQ=255)
tACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATcaca > 1:1212612/1‑140 (MQ=255)
tGGTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCg < 2:1043576/140‑1 (MQ=255)
gTCGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCa > 1:2198053/1‑140 (MQ=255)
cGGCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGt > 1:2133663/1‑140 (MQ=255)
ggCGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGtt < 2:112324/140‑1 (MQ=255)
cGTGGTGCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGtttt > 2:1617339/1‑140 (MQ=255)
tggtgCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTcc > 1:2167926/1‑140 (MQ=255)
tggtgCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTcc < 2:20520/140‑1 (MQ=255)
gtgCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCg < 1:1267082/140‑1 (MQ=255)
tgCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGc > 2:1506165/1‑140 (MQ=255)
gCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCa < 1:2364604/140‑1 (MQ=255)
gCCTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCa < 1:761288/140‑1 (MQ=255)
ccTATCGTTAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGTGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCAc < 1:1353629/140‑1 (MQ=255)
ttAACCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCtt < 1:2237057/140‑1 (MQ=255)
aaCCTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTaa > 1:938397/1‑140 (MQ=255)
cTTGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACtt < 2:2170294/140‑1 (MQ=255)
tGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTcc > 2:1957523/1‑140 (MQ=255)
tGAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTcc > 2:740844/1‑140 (MQ=255)
gAGCGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTCCa > 2:1192970/1‑140 (MQ=255)
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CCCTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGTGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTCCA > NC_000913/3484835‑3485106
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
