Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,788,824 |
C→T |
Q242* (CAG→TAG) |
yibQ → |
divergent polysaccharide deacetylase domain‑containing protein YibQ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,788,824 | 0 | C | T | 100.0%
| 552.8
/ NA
| 158 | Q242* (CAG→TAG) | yibQ | divergent polysaccharide deacetylase domain‑containing protein YibQ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (86/72); total (86/72) |
Only 100 of 158 total aligned reads displayed.
CTGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGCAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGA > NC_000913/3788689‑3788960
|
cTGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGt > 1:76795/1‑140 (MQ=255)
cTGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGt > 1:1717430/1‑140 (MQ=255)
tGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGtt < 1:956792/140‑1 (MQ=255)
tGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGtt < 2:1870643/140‑1 (MQ=255)
tGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGtt < 1:1987714/140‑1 (MQ=255)
gcgcGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGtt < 2:2381102/138‑1 (MQ=255)
gcgcGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGa > 2:1625074/1‑140 (MQ=255)
gcgcGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGa < 2:2057948/140‑1 (MQ=255)
gcgcGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGa < 1:2283036/140‑1 (MQ=255)
gcgcGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGa < 1:2062868/140‑1 (MQ=255)
gcgcGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGa < 2:603669/140‑1 (MQ=255)
gcgTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATa > 1:1051410/1‑140 (MQ=255)
gcgTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGAGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATa > 2:1218327/1‑140 (MQ=255)
tCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACtt > 1:2402571/1‑140 (MQ=255)
ttCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACAccgc > 1:430838/1‑140 (MQ=255)
cGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACAccgccg > 2:264840/1‑140 (MQ=255)
cGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACAccgccg > 2:892167/1‑140 (MQ=255)
ttgccattgGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAAc > 1:2371800/1‑140 (MQ=255)
tgccattgGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACg > 2:694837/1‑140 (MQ=255)
tgGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGc > 2:833520/1‑140 (MQ=255)
tgGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGc > 2:1082939/1‑140 (MQ=255)
gggCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGcc > 2:1938625/1‑140 (MQ=255)
gggCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGcc < 1:27016/140‑1 (MQ=255)
ggCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCt > 1:1929872/1‑140 (MQ=255)
ggCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCt < 1:1625074/140‑1 (MQ=255)
cATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGa > 1:2225102/1‑140 (MQ=255)
cATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGa > 1:849359/1‑140 (MQ=255)
ccTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGc < 2:2402571/140‑1 (MQ=255)
ccTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGc < 2:1717430/140‑1 (MQ=255)
cccTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACcgc < 2:1383539/140‑1 (MQ=255)
cccTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACcgc < 2:2338758/140‑1 (MQ=255)
gCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTaa > 1:2013189/1‑140 (MQ=255)
cAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACcgc < 2:1539524/135‑1 (MQ=255)
cAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACcgc > 1:1539524/1‑135 (MQ=255)
cAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAt > 1:359813/1‑140 (MQ=255)
tACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAtccgttc > 1:2251313/1‑140 (MQ=255)
tACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAtccgttc > 2:2127015/1‑140 (MQ=255)
cgcgTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAtccgttccg < 2:430838/140‑1 (MQ=255)
cgcgTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAtccgttccg < 2:2013189/140‑1 (MQ=255)
cgTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTg > 2:229695/1‑140 (MQ=255)
tgtTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGc > 1:2049298/1‑140 (MQ=255)
gtTACAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCg < 2:1908552/140‑1 (MQ=255)
ttGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGt > 2:1120420/1‑140 (MQ=255)
ttGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGt > 2:753777/1‑140 (MQ=255)
tGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAtcc > 1:826427/1‑127 (MQ=255)
aaCAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAg < 1:892167/140‑1 (MQ=255)
aaCAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAg < 2:1051410/140‑1 (MQ=255)
aaCAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAg < 2:356452/140‑1 (MQ=255)
aTGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAAtccgttccg > 1:1938094/1‑125 (MQ=255)
aTGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCtgtg > 1:1282694/1‑140 (MQ=255)
aTGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCATAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCtgtg > 1:379173/1‑140 (MQ=255)
ttATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAAc > 2:944214/1‑140 (MQ=255)
aaCCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCgaa < 1:1082939/140‑1 (MQ=255)
aCCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCgaag > 1:1468108/1‑140 (MQ=255)
aCCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCATAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCgaag < 2:379173/140‑1 (MQ=255)
cTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCgaagaa < 1:694837/140‑1 (MQ=255)
tGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGaaa > 1:1776129/1‑140 (MQ=255)
tGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGaaa < 2:1173702/140‑1 (MQ=255)
tGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGaaa < 2:1952610/140‑1 (MQ=255)
gccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGTTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAAc > 1:1438611/1‑140 (MQ=255)
gccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAAc > 2:2237510/1‑140 (MQ=255)
gccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAAc > 2:168582/1‑140 (MQ=255)
gccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAAc > 2:1608769/1‑140 (MQ=255)
gccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGGGAAGCtgtg > 1:337912/1‑126 (MQ=255)
gccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATACACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAAc > 2:755690/1‑140 (MQ=255)
ccgccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAAcc < 2:508479/140‑1 (MQ=255)
gccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGa < 2:1369728/140‑1 (MQ=255)
ccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGAt > 1:1597956/1‑140 (MQ=255)
ccAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGAt < 1:1868621/140‑1 (MQ=255)
gACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGa < 2:100704/140‑1 (MQ=255)
aCATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGaa > 2:68780/1‑140 (MQ=255)
cATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAAc < 2:655355/140‑1 (MQ=255)
cATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAAc < 1:442047/140‑1 (MQ=255)
cATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAAc < 1:2127015/140‑1 (MQ=255)
ttACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCATAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCt > 2:2126434/1‑140 (MQ=255)
ggTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATg > 1:1159707/1‑140 (MQ=255)
gTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGaa > 2:2262820/1‑129 (MQ=255)
gTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGc > 1:834670/1‑140 (MQ=255)
gTGAAAGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGc > 2:1912804/1‑140 (MQ=255)
aaaGCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTaa > 2:1177290/1‑140 (MQ=255)
gCCAGCAGCTTGCTGAATGACCCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCg < 2:830454/140‑1 (MQ=255)
gCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCg < 1:2289525/140‑1 (MQ=255)
gCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCg < 1:1310490/140‑1 (MQ=255)
gCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCg < 1:168582/140‑1 (MQ=255)
gCCAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATACACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCg < 1:755690/140‑1 (MQ=255)
ccAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGc > 2:1498455/1‑140 (MQ=255)
ccAGCAGCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGc > 2:126293/1‑140 (MQ=255)
cagcagCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGct > 1:54997/1‑140 (MQ=255)
cagcagCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGct < 1:1861220/140‑1 (MQ=255)
cagcagCTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGct < 1:2232219/140‑1 (MQ=255)
gcagcTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGcttc > 2:19914/1‑140 (MQ=255)
gcagcTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGcttc > 2:2013703/1‑140 (MQ=255)
gcagcTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGcttc > 2:822648/1‑140 (MQ=255)
cagcTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGcttct < 1:2303043/140‑1 (MQ=255)
cTTGCTGAATGAACCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTg < 2:2049298/140‑1 (MQ=255)
aatgaaCCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTAtt < 2:310903/140‑1 (MQ=255)
tgaaCCGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGaa < 2:1565016/133‑1 (MQ=255)
ccGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGa < 2:359813/140‑1 (MQ=255)
ccGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGa < 1:1177290/140‑1 (MQ=255)
ccGTAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGa < 2:914118/140‑1 (MQ=255)
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CTGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGCAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGA > NC_000913/3788689‑3788960
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
