Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,831,149 |
T→C |
R231R (CGT→CGC) |
yicH → |
AsmA famly protein YicH |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,831,149 | 0 | T | C | 100.0%
| 559.7
/ NA
| 155 | R231R (CGT→CGC) | yicH | AsmA famly protein YicH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (81/74); total (81/74) |
Only 100 of 156 total aligned reads displayed.
AAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCA > NC_000913/3831013‑3831282
|
aaGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTa > 1:1551050/1‑140 (MQ=255)
aGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTAc > 1:598517/1‑140 (MQ=255)
aGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTAc > 1:981100/1‑140 (MQ=255)
aGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTAc > 2:727991/1‑140 (MQ=255)
aGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTAc > 2:564332/1‑140 (MQ=255)
tATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCg > 2:836153/1‑140 (MQ=255)
tATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCg > 2:2245788/1‑140 (MQ=255)
ttGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGaa < 2:1782401/140‑1 (MQ=255)
aaCGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATc > 2:301188/1‑140 (MQ=255)
aaCGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATc > 2:1434187/1‑140 (MQ=255)
cGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGc < 2:832346/140‑1 (MQ=255)
gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCt > 1:379233/1‑140 (MQ=255)
gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCt > 2:1212526/1‑140 (MQ=255)
gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCt > 2:1308664/1‑140 (MQ=255)
gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCt > 2:1345176/1‑140 (MQ=255)
gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCt > 2:1426960/1‑140 (MQ=255)
gATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCt > 2:2282917/1‑140 (MQ=255)
aTCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTa > 1:796298/1‑140 (MQ=255)
tCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTaa < 2:748922/140‑1 (MQ=255)
tCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTaa > 1:2323931/1‑140 (MQ=255)
cgcgTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAAc > 2:2322452/1‑140 (MQ=255)
ttACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGAc < 2:345929/140‑1 (MQ=255)
gACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTg < 1:1426960/140‑1 (MQ=255)
gACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTg < 1:1212526/140‑1 (MQ=255)
aCTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgc > 1:1497635/1‑140 (MQ=255)
cTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgcg > 2:208681/1‑140 (MQ=255)
cTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgcg > 2:2292382/1‑140 (MQ=255)
cTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgcg < 2:1497635/140‑1 (MQ=255)
cTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgcg < 2:566335/140‑1 (MQ=255)
cTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgcg > 2:910427/1‑140 (MQ=255)
ccTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCAt > 2:2036211/1‑140 (MQ=255)
cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCAtt < 1:2935/140‑1 (MQ=255)
cTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCAtt < 2:1070763/140‑1 (MQ=255)
gggTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTAc < 1:2292382/140‑1 (MQ=255)
ggTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACg < 1:2245788/140‑1 (MQ=255)
gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGc > 2:1854834/1‑140 (MQ=255)
gTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGc > 1:881703/1‑140 (MQ=255)
tGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGct < 2:1757099/140‑1 (MQ=255)
tGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGct < 1:1902873/140‑1 (MQ=255)
gCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGctc > 2:2358931/1‑140 (MQ=255)
gCCGACATCGCCCGCGAGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTgcg < 2:1849815/129‑1 (MQ=255)
cGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTg > 1:2359965/1‑140 (MQ=255)
cGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTg > 2:63444/1‑140 (MQ=255)
aCATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTc > 2:318532/1‑140 (MQ=255)
tCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg < 2:2178602/140‑1 (MQ=255)
tCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg < 1:1076057/140‑1 (MQ=255)
tCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg < 1:1308664/140‑1 (MQ=255)
tCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcg > 1:1881988/1‑140 (MQ=255)
cGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGct < 2:1949259/131‑1 (MQ=255)
cGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGct > 1:1949259/1‑131 (MQ=255)
ccGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGTAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCcgtcgt > 1:1828464/1‑140 (MQ=255)
cgGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGc > 2:1323619/1‑140 (MQ=255)
aCATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGAt < 1:1658041/140‑1 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg < 1:2089790/140‑1 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg < 2:598517/140‑1 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg < 1:1434187/140‑1 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg < 1:2036211/140‑1 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg < 1:301188/140‑1 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg > 1:1756093/1‑140 (MQ=255)
ttAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg < 1:727991/140‑1 (MQ=255)
ccGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAAGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGc > 1:1324433/1‑140 (MQ=255)
cGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGcc < 1:564332/140‑1 (MQ=255)
aaaCGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTgg > 2:25012/1‑140 (MQ=255)
aaaCGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGCCCCGTCGTTGCAGATTGGTCGCCTgg < 2:1541304/140‑1 (MQ=255)
aaCGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGa > 1:2335065/1‑140 (MQ=255)
aaCGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGa > 1:1066929/1‑140 (MQ=255)
aCGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGaa < 2:1565064/140‑1 (MQ=255)
cgcgCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTgg > 1:2299263/1‑129 (MQ=255)
cAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGAt > 2:1230064/1‑140 (MQ=255)
tAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATg < 1:2358931/140‑1 (MQ=255)
tAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATg > 2:2138483/1‑140 (MQ=255)
cGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTc < 2:882839/140‑1 (MQ=255)
cGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTc < 2:546627/140‑1 (MQ=255)
cGACGGCAGCTGGCAAGTGCAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGtt > 2:394744/1‑140 (MQ=255)
cGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGc < 2:1452251/140‑1 (MQ=255)
cGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGc < 1:1854834/140‑1 (MQ=255)
cGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCAGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGc < 2:1827017/140‑1 (MQ=255)
ggCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCa > 2:1610720/1‑140 (MQ=255)
ggCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCa < 2:462269/140‑1 (MQ=255)
gCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGt > 1:1442875/1‑140 (MQ=255)
gCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGt < 2:542511/140‑1 (MQ=255)
tGGCAAGTGGAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTcc < 2:2354364/140‑1 (MQ=255)
ggAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTggg > 2:1794305/1‑140 (MQ=255)
gAAAACCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGc > 2:1671826/1‑140 (MQ=255)
aCCTGCGCATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTg > 2:1447044/1‑140 (MQ=255)
gcgcATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccg > 1:520974/1‑140 (MQ=255)
gcgcATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccg > 1:1204099/1‑140 (MQ=255)
gcgcATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccg > 1:1726668/1‑140 (MQ=255)
gcgcATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccg > 2:2299975/1‑140 (MQ=255)
cgcATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccga < 1:162483/140‑1 (MQ=255)
gcATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccgac > 2:706998/1‑140 (MQ=255)
cATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccgacc < 1:71176/140‑1 (MQ=255)
cATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccgacc > 1:1758701/1‑140 (MQ=255)
cATGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTgaccgacc < 1:1794305/140‑1 (MQ=255)
aTGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCt < 1:833940/140‑1 (MQ=255)
aTGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCt < 2:80997/140‑1 (MQ=255)
aTGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCt < 2:1758701/140‑1 (MQ=255)
aTGGCGGATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCt < 1:455982/140‑1 (MQ=255)
gATATACGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGAtct < 2:284035/140‑1 (MQ=255)
tataCGCCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCa < 2:1828464/140‑1 (MQ=255)
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AAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCA > NC_000913/3831013‑3831282
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
