Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F28 I1 R1	258	142.3	4824480	99.1%	4781059	138.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,020,242	T→C	V6A (GTA→GCA)	ubiB →	ubiquinone biosynthesis protein UbiB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,020,242	0	T	C	100.0%	409.5 / NA	114	V6A (GTA→GCA)	ubiB	ubiquinone biosynthesis protein UbiB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (51/63); total (51/63)

Only 100 of 114 total aligned reads displayed.

TTACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGTACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACAA  >  NC_000913/4020105‑4020377

ttACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCAc                                                                                                                                       <  2:1773262/140‑1 (MQ=255)

 tACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACg                                                                                                                                      <  2:885779/140‑1 (MQ=255)

 tACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACg                                                                                                                                      <  1:730088/140‑1 (MQ=255)

 tACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACg                                                                                                                                      <  1:826813/140‑1 (MQ=255)

 tACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACg                                                                                                                                      <  1:847141/140‑1 (MQ=255)

 tACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACg                                                                                                                                      <  2:1095596/140‑1 (MQ=255)

     gAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGgcgc                                                                                                                                  <  1:761716/140‑1 (MQ=255)

     gAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGgcgc                                                                                                                                  <  1:1503190/140‑1 (MQ=255)

     gAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGgcgc                                                                                                                                  <  1:639943/140‑1 (MQ=255)

      aaGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTTGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACg                                                                                                                                      >  2:2243522/1‑135 (MQ=255)

      aaGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGcc                                                                                                                                 <  2:763523/140‑1 (MQ=255)

      aaGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGcc                                                                                                                                 <  1:443666/140‑1 (MQ=255)

           tGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGgcgc                                                                                                                                  <  2:1437860/134‑1 (MQ=255)

           tGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGgcgc                                                                                                                                  >  1:1437860/1‑134 (MQ=255)

           tGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTatat                                                                                                                            >  2:1465332/1‑140 (MQ=255)

           tGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTatat                                                                                                                            >  2:558372/1‑140 (MQ=255)

           tGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTatat                                                                                                                            >  1:1481559/1‑140 (MQ=255)

                   ggCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGcc                                                                                                                                 <  1:1265499/127‑1 (MQ=255)

                   ggCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGcc                                                                                                                                 >  2:1265499/1‑127 (MQ=255)

                   ggCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTcatcat                                                                                                                    >  2:991594/1‑140 (MQ=255)

                     cACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCt                                                                                                                                >  2:29385/1‑126 (MQ=255)

                     cACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCt                                                                                                                                <  1:29385/126‑1 (MQ=255)

                       cccGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGc                                                                                                                >  2:749174/1‑140 (MQ=255)

                       cccGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGc                                                                                                                >  2:2400299/1‑140 (MQ=255)

                       cccGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGc                                                                                                                >  2:2005410/1‑140 (MQ=255)

                        ccGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCa                                                                                                               <  1:1848453/140‑1 (MQ=255)

                        ccGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCa                                                                                                               >  2:865884/1‑140 (MQ=255)

                          ggTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACt                                                                                                             >  2:1104019/1‑140 (MQ=255)

                           gTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACtt                                                                                                            >  2:255434/1‑140 (MQ=255)

                               gCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACtttttt                                                                                                        <  2:1654094/140‑1 (MQ=255)

                                  tGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAg                                                                                                     <  1:264963/140‑1 (MQ=255)

                                     aGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTa                                                                                                  <  2:473270/140‑1 (MQ=255)

                                        ggCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACgg                                                                                               <  1:1040771/140‑1 (MQ=255)

                                          ccTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGAc                                                                                             >  1:175702/1‑140 (MQ=255)

                                          ccTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGAc                                                                                             <  1:51340/140‑1 (MQ=255)

                                           cTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACt                                                                                            <  1:2108706/140‑1 (MQ=255)

                                              gTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTtga                                                                                         >  2:1191807/1‑140 (MQ=255)

                                              gTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTtga                                                                                         <  1:1479221/140‑1 (MQ=255)

                                               tttGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACgg                                                                                               >  2:665225/1‑133 (MQ=255)

                                                  gCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTgaagaa                                                                                     <  2:406305/140‑1 (MQ=255)

                                                   cGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTa                                                                                                  >  2:2012959/1‑126 (MQ=255)

                                                   cGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTa                                                                                                  <  1:2012959/126‑1 (MQ=255)

                                                   cGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAAc                                                                                    >  2:1949183/1‑140 (MQ=255)

                                                    ggAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACt                                                                                   <  2:175702/140‑1 (MQ=255)

                                                            cGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCa                                                                           <  1:991594/140‑1 (MQ=255)

                                                             ggCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCaa                                                                          >  2:10844/1‑140 (MQ=255)

                                                             ggCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCaa                                                                          >  2:1293313/1‑140 (MQ=255)

                                                                tGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAAt                                                                       <  1:760515/140‑1 (MQ=255)

                                                                tGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAAt                                                                       <  1:1949183/140‑1 (MQ=255)

                                                                tGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAAt                                                                       <  2:1505516/140‑1 (MQ=255)

                                                                           gTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCAccc                                                            <  1:1462625/140‑1 (MQ=255)

                                                                           gTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCAccc                                                            <  1:10844/140‑1 (MQ=255)

                                                                           gTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCAccc                                                            <  1:1293313/140‑1 (MQ=255)

                                                                            tGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCAc                                                              >  2:72367/1‑137 (MQ=255)

                                                                            tGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCAc                                                              <  1:72367/137‑1 (MQ=255)

                                                                            tGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCt                                                           <  1:1150274/140‑1 (MQ=255)

                                                                                 ttGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGc                                                      <  2:1083039/140‑1 (MQ=255)

                                                                                 ttGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGc                                                      >  1:1305736/1‑140 (MQ=255)

                                                                                   gATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTa                                                    <  1:2338670/140‑1 (MQ=255)

                                                                                        ccTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGc                                                         >  2:1940621/1‑130 (MQ=255)

                                                                                         cTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTa                                              >  1:509797/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  2:572224/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  1:93034/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  2:861755/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  1:421373/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  1:2025709/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  1:1046453/1‑140 (MQ=255)

                                                                                           gACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATg                                            >  2:309650/1‑140 (MQ=255)

                                                                                             ccAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGc                                          <  1:1191807/140‑1 (MQ=255)

                                                                                              cAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCg                                         <  1:2110704/140‑1 (MQ=255)

                                                                                              cAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCg                                         <  1:1104019/140‑1 (MQ=255)

                                                                                              cAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCg                                         <  1:558372/140‑1 (MQ=255)

                                                                                                aaCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGc                                                <  2:844615/131‑1 (MQ=255)

                                                                                                aaCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGAt                                       <  1:1242265/140‑1 (MQ=255)

                                                                                                aaCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGAt                                       <  2:509797/140‑1 (MQ=255)

                                                                                                aaCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGAt                                       >  2:540243/1‑140 (MQ=255)

                                                                                                aaCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGAt                                       <  1:2400299/140‑1 (MQ=255)

                                                                                                 aCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATa                                      >  1:1771237/1‑140 (MQ=255)

                                                                                                 aCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATa                                      >  1:2168914/1‑140 (MQ=255)

                                                                                                 aCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATa                                      <  1:404083/140‑1 (MQ=255)

                                                                                                 aCGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATa                                      >  1:2394309/1‑140 (MQ=255)

                                                                                                  cGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATAc                                     <  1:540243/140‑1 (MQ=255)

                                                                                                   ggCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACt                                    <  2:863917/140‑1 (MQ=255)

                                                                                                      tGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGc                                          >  2:1324101/1‑131 (MQ=255)

                                                                                                      tGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGc                                          <  1:1324101/131‑1 (MQ=255)

                                                                                                                ggAGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGAt                       <  2:1305736/140‑1 (MQ=255)

                                                                                                                  aGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGc                     >  1:1624365/1‑140 (MQ=255)

                                                                                                                  aGGCTAAATGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGc                     >  1:1445259/1‑140 (MQ=255)

                                                                                                                       aaaTGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAAt                <  1:2005410/140‑1 (MQ=255)

                                                                                                                        aaTGACGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATc               >  1:703843/1‑140 (MQ=255)

                                                                                                                            aCGCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCa           <  2:1771237/140‑1 (MQ=255)

                                                                                                                              gCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATa         >  2:581031/1‑140 (MQ=255)

                                                                                                                              gCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATa         >  1:1414304/1‑140 (MQ=255)

                                                                                                                              gCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATa         >  2:437505/1‑140 (MQ=255)

                                                                                                                              gCCAGGTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATa         <  2:1445259/140‑1 (MQ=255)

                                                                                                                                   gTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGAc    <  2:2394309/140‑1 (MQ=255)

                                                                                                                                   gTGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGAc    <  1:309650/140‑1 (MQ=255)

                                                                                                                                    tGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACa   <  1:749174/140‑1 (MQ=255)

                                                                                                                                    tGAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACa   <  2:1046453/140‑1 (MQ=255)

                                                                                                                                     gAAGCACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACaa  <  2:1748644/140‑1 (MQ=255)

TTACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGACGCCAGGTGAAGTACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACAA  >  NC_000913/4020105‑4020377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A