Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,065,386 |
T→C |
G127G (GGA→GGG) |
yihO ← |
putative sulfoquinovose transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,065,386 | 0 | T | C | 100.0%
| 681.8
/ NA
| 188 | G127G (GGA→GGG) | yihO | putative sulfoquinovose transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (97/91); total (97/91) |
Only 100 of 188 total aligned reads displayed.
ACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTT > NC_000913/4065250‑4065520
|
aCGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCa < 1:1015727/140‑1 (MQ=255)
aCGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCa < 2:1822732/140‑1 (MQ=255)
cGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa < 1:697771/140‑1 (MQ=255)
cGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa < 2:2019682/140‑1 (MQ=255)
gCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa > 2:802282/1‑139 (MQ=255)
gCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa < 1:802282/139‑1 (MQ=255)
ccACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAAc < 1:345611/140‑1 (MQ=255)
cACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTTATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAAca > 1:592665/1‑140 (MQ=255)
aCGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAAcat > 1:365950/1‑140 (MQ=255)
aCGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAAcat > 1:1565950/1‑140 (MQ=255)
aCGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAAcat > 1:1770111/1‑140 (MQ=255)
aCGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAAcat > 1:1720626/1‑140 (MQ=255)
aaaTCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAAc > 1:112475/1‑140 (MQ=255)
aTCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAg > 1:2300644/1‑140 (MQ=255)
tCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAgc < 1:2269045/140‑1 (MQ=255)
tAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa < 2:412001/122‑1 (MQ=255)
tAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa > 1:1643143/1‑122 (MQ=255)
tAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCaa < 2:1643143/122‑1 (MQ=255)
tAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCgg > 2:1112675/1‑140 (MQ=255)
tAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCgg > 2:320306/1‑140 (MQ=255)
ccTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGc < 1:414539/140‑1 (MQ=255)
cTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCa > 1:1346893/1‑140 (MQ=255)
aTGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAAt > 1:905446/1‑140 (MQ=255)
tGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAAtcgtcg < 1:248468/140‑1 (MQ=255)
gCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATcgtcgt > 2:1713754/1‑140 (MQ=255)
gCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATcgtcgt > 2:1357937/1‑140 (MQ=255)
gCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATcgtcgt > 2:300056/1‑140 (MQ=255)
caccacCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGtt > 2:1181045/1‑140 (MQ=255)
ccaccCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGtttt < 2:1366671/140‑1 (MQ=255)
cccTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAAc > 2:1492188/1‑140 (MQ=255)
cccTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAAc > 2:1159935/1‑140 (MQ=255)
cccTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTAAAc > 1:1468094/1‑140 (MQ=255)
tGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCgg < 1:1357937/140‑1 (MQ=255)
tGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCgg < 2:54287/140‑1 (MQ=255)
tGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCACACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCgg < 2:2093822/140‑1 (MQ=255)
gCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGca > 1:127913/1‑140 (MQ=255)
gCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGca > 2:735036/1‑140 (MQ=255)
cGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCgg < 2:629629/137‑1 (MQ=255)
cGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCgg > 1:629629/1‑137 (MQ=255)
gTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGcaaac > 1:1364789/1‑140 (MQ=255)
tAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGcaaaca < 2:127913/140‑1 (MQ=255)
tAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGcaaaca < 1:1712217/140‑1 (MQ=255)
aGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGcaaacaaa > 1:763252/1‑140 (MQ=255)
gcgAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCgg < 1:1483327/128‑1 (MQ=255)
gcgAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAggt > 2:1651184/1‑140 (MQ=255)
gAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAggtgg < 2:979273/140‑1 (MQ=255)
gCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGgtggtg < 1:488611/140‑1 (MQ=255)
cTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGtggtgg < 2:1689422/140‑1 (MQ=255)
cgcgcgcTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGa < 1:320306/140‑1 (MQ=255)
cgcgcgcTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGa < 2:2036005/140‑1 (MQ=255)
cgcgcgcTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAAC‑AAAGGTGGTGGCGAt > 1:959230/1‑140 (MQ=255)
gcgcgcTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGAt < 2:581618/140‑1 (MQ=255)
cATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTgg > 1:1495019/1‑140 (MQ=255)
ttCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAggtgg < 2:2101974/124‑1 (MQ=255)
ttCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAggtgg > 1:2101974/1‑124 (MQ=255)
ttCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAg < 1:695094/140‑1 (MQ=255)
ttCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAg < 1:879731/140‑1 (MQ=255)
ggTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGtt < 2:1346893/140‑1 (MQ=255)
gTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGt < 1:1222540/138‑1 (MQ=255)
gTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGt > 2:1222540/1‑138 (MQ=255)
ggTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTa > 2:887901/1‑140 (MQ=255)
aTTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAAcgc > 2:269913/1‑140 (MQ=255)
gCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAAcgccgc < 1:20466/140‑1 (MQ=255)
gATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGaa < 1:269913/140‑1 (MQ=255)
catcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCg < 1:1674932/140‑1 (MQ=255)
atcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGc > 2:189204/1‑140 (MQ=255)
atcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGc > 1:1376045/1‑140 (MQ=255)
atcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGc < 1:189204/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 1:506126/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 1:1112675/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 1:571878/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 2:1770111/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 2:1376045/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 1:1595058/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 1:1651064/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt < 2:2265623/140‑1 (MQ=255)
tcGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTACAATTAACGCCGCCGGAACCGCt < 2:763252/140‑1 (MQ=255)
cGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTg < 2:321275/140‑1 (MQ=255)
cGCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTg > 2:596638/1‑140 (MQ=255)
gCACCATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTAAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGc < 2:1468094/140‑1 (MQ=255)
ccATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt > 1:611244/1‑135 (MQ=255)
ccATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCata < 2:112475/140‑1 (MQ=255)
cATACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCatat > 1:2195382/1‑140 (MQ=255)
tACGAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATataa > 2:2342559/1‑140 (MQ=255)
gAGCAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGaa < 2:476520/124‑1 (MQ=255)
cAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt > 2:705007/1‑126 (MQ=255)
cAGTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATataaaataaa > 1:2010176/1‑140 (MQ=255)
gTTCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCa > 2:863640/1‑127 (MQ=255)
ttCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAggg > 1:1929318/1‑140 (MQ=255)
ttCATCAGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAggg < 1:300056/140‑1 (MQ=255)
tcatcaGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCt > 2:697320/1‑122 (MQ=255)
catcaGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCata > 2:1530339/1‑126 (MQ=255)
catcaGACTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAc > 1:2011682/1‑140 (MQ=255)
aCTGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAAtt > 1:1014273/1‑140 (MQ=255)
tGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTg > 1:2306445/1‑140 (MQ=255)
tGTATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTg > 2:972049/1‑140 (MQ=255)
tATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTGcc > 1:728449/1‑140 (MQ=255)
tATGAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTGcc > 1:447898/1‑140 (MQ=255)
gAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTGCCttt < 1:1159935/140‑1 (MQ=255)
gAAAGCCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTGCCttt > 1:1844670/1‑140 (MQ=255)
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ACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGGATCATCGCACCATACGAGCAGTTCATCAGACTGTATGAAAGTCCAAACATCATAAACAGCGCGGTGGCAATCGTCGTTTTAACCGGCAAACAAAAGGTGGTGGCGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGACGAAATTTGCCTTT > NC_000913/4065250‑4065520
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
