Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F28 I1 R1 258 142.3 4824480 99.1% 4781059 138.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,206,123 A→G G470G (GGT→GGC)  purH ← bifunctional AICAR transformylase/IMP cyclohydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,206,1230AG100.0% 287.3 / NA 80G470G (GGT→GGC) purHbifunctional AICAR transformylase/IMP cyclohydrolase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (38/42);  total (38/42)

TGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGATAGCGTTGGA  >  NC_000913/4205989‑4206248
                                                                                                                                      |                                                                                                                             
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          >  1:1622518/1‑140 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          >  1:909062/1‑140 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          >  1:196842/1‑140 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          >  1:1809598/1‑140 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          >  1:1617269/1‑140 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          >  1:1413063/1‑140 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          <  2:1741200/140‑1 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          <  2:1016250/140‑1 (MQ=255)
tGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCAGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCttt                                                                                                                          <  2:322042/140‑1 (MQ=255)
 gCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTc                                                                                                                         <  2:787151/140‑1 (MQ=255)
     gtcgGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACtt                                                                                                                     >  1:68507/1‑140 (MQ=255)
               gcAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTc                                                                                                                    <  2:252266/131‑1 (MQ=255)
               gcAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTc                                                                                                                    >  1:252266/1‑131 (MQ=255)
                    cACTTCGTCATCACGGATAGAACCGCCAGGCT‑GATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:1111359/140‑1 (MQ=255)
                     ccTTGGTCATCCCGGAAAGACCCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:1622518/139‑1 (MQ=255)
                     ccTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:749348/139‑1 (MQ=255)
                     ccTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:68507/139‑1 (MQ=255)
                     ccTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:218858/139‑1 (MQ=255)
                     aCTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:1617269/140‑1 (MQ=255)
                     aCTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:283673/140‑1 (MQ=255)
                     aCTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:344748/140‑1 (MQ=255)
                     aCTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:1413063/140‑1 (MQ=255)
                     aCTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  2:1809598/140‑1 (MQ=255)
                             atcaCGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTaa                                                                                             >  1:1708907/1‑140 (MQ=255)
                              tcaCGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     >  2:475146/1‑131 (MQ=255)
                              tcaCGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGc                                                                                                     <  1:475146/131‑1 (MQ=255)
                                 cGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATAcc                                                                                         >  2:1053177/1‑140 (MQ=255)
                                        aaCCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGAtt                                                                                  >  2:2294419/1‑140 (MQ=255)
                                          ccGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGAtttt                                                                                >  2:1110911/1‑140 (MQ=255)
                                            gCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTg                                                                              >  2:1400302/1‑140 (MQ=255)
                                            gCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTg                                                                              >  2:2213825/1‑140 (MQ=255)
                                            gCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTg                                                                              <  2:196842/140‑1 (MQ=255)
                                             ccAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGc                                                                             >  2:1155497/1‑140 (MQ=255)
                                             ccAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGc                                                                             >  1:2289717/1‑140 (MQ=255)
                                              cAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCg                                                                            >  2:19548/1‑140 (MQ=255)
                                              cAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCg                                                                            >  1:1886797/1‑140 (MQ=255)
                                                ggCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGa                                                                          <  1:1400302/140‑1 (MQ=255)
                                                 gCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAg                                                                         >  1:1889981/1‑140 (MQ=255)
                                                   tGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTa                                                                       <  2:337342/140‑1 (MQ=255)
                                                     gATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTaca                                                                     <  1:1155497/140‑1 (MQ=255)
                                                          cGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                >  1:7974/1‑140 (MQ=255)
                                                          cGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                <  2:1886797/140‑1 (MQ=255)
                                                          cGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                <  1:1110911/140‑1 (MQ=255)
                                                          cGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                <  2:2289717/140‑1 (MQ=255)
                                                          cGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                >  2:1487840/1‑140 (MQ=255)
                                                          cGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                >  1:2035252/1‑140 (MQ=255)
                                                               gTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                <  1:1787434/135‑1 (MQ=255)
                                                               gTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                >  2:1787434/1‑135 (MQ=255)
                                                               gTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                >  1:1068461/1‑135 (MQ=255)
                                                               gTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCgg                                                                <  2:1068461/135‑1 (MQ=255)
                                                               gTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCAt                                                           >  2:698900/1‑140 (MQ=255)
                                                                  aCGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTg                                                        >  2:1830116/1‑140 (MQ=255)
                                                                     cccGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGcc                                                     <  2:7974/140‑1 (MQ=255)
                                                                         cAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCcgcg                                                 >  2:953661/1‑140 (MQ=255)
                                                                         cAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCcgcg                                                 <  2:1889981/140‑1 (MQ=255)
                                                                           gcggcggcgGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGcc                                               <  1:1487840/140‑1 (MQ=255)
                                                                                   ggcATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGa                                       <  1:955584/140‑1 (MQ=255)
                                                                                   ggcATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGa                                       <  2:2352776/140‑1 (MQ=255)
                                                                                    gcATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGAt                                      <  1:2213825/140‑1 (MQ=255)
                                                                                      aTCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAg                                    >  1:1158893/1‑140 (MQ=255)
                                                                                                tCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGa                                       >  2:75101/1‑127 (MQ=255)
                                                                                                tCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGa                                       <  1:75101/127‑1 (MQ=255)
                                                                                                 cgcgGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGttt                         >  1:102981/1‑140 (MQ=255)
                                                                                                  gcgGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGtttt                        <  1:698900/140‑1 (MQ=255)
                                                                                                   cgGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGttttt                       >  2:882703/1‑140 (MQ=255)
                                                                                                   cgGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGttttt                       >  2:1851172/1‑140 (MQ=255)
                                                                                                   cgGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGttttt                       >  1:181384/1‑140 (MQ=255)
                                                                                                   cgGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGGACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGttttt                       >  2:528117/1‑140 (MQ=255)
                                                                                                    ggAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTg                      <  1:1053177/140‑1 (MQ=255)
                                                                                                    ggAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTg                      <  2:909062/140‑1 (MQ=255)
                                                                                                     gAACGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTgg                     >  1:517050/1‑140 (MQ=255)
                                                                                                      aaCGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGc                    <  2:1962017/140‑1 (MQ=255)
                                                                                                      aaCGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGc                    <  1:882703/140‑1 (MQ=255)
                                                                                                       aCGGGAAGAACGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCa                   <  2:517050/140‑1 (MQ=255)
                                                                                                              gaaCGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGa            <  2:181384/140‑1 (MQ=255)
                                                                                                               aaCGCGTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGAt           <  2:1708907/140‑1 (MQ=255)
                                                                                                                    gTCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGATAGCGt      >  2:264419/1‑140 (MQ=255)
                                                                                                                     tCAGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGATAGCGtt     >  2:1314587/1‑140 (MQ=255)
                                                                                                                       aGAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGATAGCGTTgg   <  1:19548/140‑1 (MQ=255)
                                                                                                                        gAAGCCATCGAGGAGCCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGATAGCGTTGGa  <  2:874196/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                             
TGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGGCGATTTTTGCGGAGTACACGCGGCTCATCTGGCCCGCGCCAATGCCGATAGTCATATTGTTTTTGGCATAGACGATAGCGTTGGA  >  NC_000913/4205989‑4206248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A