Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F28 I1 R1 258 142.3 4824480 99.1% 4781059 138.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,264,913 A→G P200P (CCA→CCG)  dnaB → replicative DNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,264,9130AG100.0% 439.7 / NA 122P200P (CCA→CCG) dnaBreplicative DNA helicase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (56/66);  total (56/66)

Only 100 of 124 total aligned reads displayed.

AAGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCACACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTC  >  NC_000913/4264777‑4265048
                                                                                                                                        |                                                                                                                                       
aaGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCgcac                                                                                                                                      >  2:1298345/1‑140 (MQ=255)
aaGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCgcac                                                                                                                                      >  1:1917548/1‑140 (MQ=255)
 aGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACg                                                                                                                                     <  1:1953348/140‑1 (MQ=255)
 aGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACg                                                                                                                                     <  1:2357673/140‑1 (MQ=255)
   aTCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGAt                                                                                                                                   >  1:548004/1‑140 (MQ=255)
     ctgctgGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATgg                                                                                                                                 <  2:1321057/140‑1 (MQ=255)
     ctgctgGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATgg                                                                                                                                 <  2:1985443/140‑1 (MQ=255)
       gctgGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAGCAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCg                                                                                                                               <  1:713961/140‑1 (MQ=255)
       gctgGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCg                                                                                                                               <  1:1969211/140‑1 (MQ=255)
        ctgGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGt                                                                                                                              >  2:947544/1‑140 (MQ=255)
        ctgGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGt                                                                                                                              >  2:2338185/1‑140 (MQ=255)
          ggATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTa                                                                                                                            >  1:542411/1‑140 (MQ=255)
          ggATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTa                                                                                                                            <  1:13052/140‑1 (MQ=255)
           gATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTAc                                                                                                                           <  2:1759617/140‑1 (MQ=255)
            aTCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTAcc                                                                                                                          <  2:1188335/140‑1 (MQ=255)
            aTCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTAcc                                                                                                                          <  1:239628/140‑1 (MQ=255)
             tCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGCATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCg                                                                                                                         >  2:1832142/1‑140 (MQ=255)
                ggCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCgggg                                                                                                                      >  2:2083312/1‑140 (MQ=255)
                 gCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGt                                                                                                                     >  2:1006310/1‑140 (MQ=255)
                 gCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGt                                                                                                                     <  1:1086381/140‑1 (MQ=255)
                  cTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTa                                                                                                                    <  1:1937450/140‑1 (MQ=255)
                     aaTCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGt                                                                                                                              >  2:2373468/1‑127 (MQ=255)
                     aaTCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGt                                                                                                                              <  1:2373468/127‑1 (MQ=255)
                     aaTCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTAcc                                                                                                                          <  2:556888/131‑1 (MQ=255)
                      aTCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAaca                                                                                                                >  1:1905553/1‑140 (MQ=255)
                      aTCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAaca                                                                                                                <  2:645518/140‑1 (MQ=255)
                       tCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATgg                                                                                                                                 >  1:1624353/1‑122 (MQ=255)
                       tCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATgg                                                                                                                                 <  2:1624353/122‑1 (MQ=255)
                       tCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAacac                                                                                                               <  2:1987239/140‑1 (MQ=255)
                       tCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAacac                                                                                                               <  2:1131072/140‑1 (MQ=255)
                           gcgTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTAcc                                                                                                                          <  1:1598941/125‑1 (MQ=255)
                           gcgTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTAcc                                                                                                                          >  2:1598941/1‑125 (MQ=255)
                           gcgTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGt                                                                                                           >  2:680997/1‑140 (MQ=255)
                           gcgTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGt                                                                                                           >  2:982826/1‑140 (MQ=255)
                            cgTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGtt                                                                                                          <  1:1499085/140‑1 (MQ=255)
                               cTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATg                                                                                                       >  1:977198/1‑140 (MQ=255)
                               cTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATg                                                                                                       <  2:1917548/140‑1 (MQ=255)
                               cTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATg                                                                                                       >  1:2067559/1‑140 (MQ=255)
                                    aaaTTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTCCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGAt                                                                                                  <  1:1216843/140‑1 (MQ=255)
                                     aaTTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGAtc                                                                                                 <  1:2158950/140‑1 (MQ=255)
                                         gCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTcaa                                                                                             >  1:805712/1‑140 (MQ=255)
                                         gCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTcaa                                                                                             >  1:779152/1‑140 (MQ=255)
                                          ccGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTcaac                                                                                            >  2:1357684/1‑140 (MQ=255)
                                          ccGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTcaac                                                                                            >  1:364205/1‑140 (MQ=255)
                                          ccGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTcaac                                                                                            >  1:1244783/1‑140 (MQ=255)
                                               aGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACaaaaa                                                                                       <  1:285837/140‑1 (MQ=255)
                                               aGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACaaaaa                                                                                       <  1:1006310/140‑1 (MQ=255)
                                               aGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACaaaaa                                                                                       <  1:1487720/140‑1 (MQ=255)
                                                    tGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCg                                                                                  <  1:2083312/140‑1 (MQ=255)
                                                    tGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCg                                                                                  <  2:2092609/140‑1 (MQ=255)
                                                    tGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCg                                                                                  <  1:1101005/140‑1 (MQ=255)
                                                    tGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCg                                                                                  >  1:1090836/1‑140 (MQ=255)
                                                     gCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGc                                                                                 <  2:108733/140‑1 (MQ=255)
                                                       gAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTg                                                                               <  2:1649443/140‑1 (MQ=255)
                                                        aaCAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTgg                                                                              >  2:1230017/1‑140 (MQ=255)
                                                            aaGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTg                                                                          <  1:1639201/140‑1 (MQ=255)
                                                              gACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCa                                                                        <  2:977198/140‑1 (MQ=255)
                                                              gACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCa                                                                        <  2:2202844/140‑1 (MQ=255)
                                                                 gAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGcc                                                                     >  1:1337891/1‑140 (MQ=255)
                                                                  aaGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCg                                                                    >  2:1226262/1‑140 (MQ=255)
                                                                  aaGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCg                                                                    <  2:542411/140‑1 (MQ=255)
                                                                  aaGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCg                                                                    <  1:1226262/140‑1 (MQ=255)
                                                                   aGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGGCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGt                                                                   <  2:2045952/140‑1 (MQ=255)
                                                                   aGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGt                                                                   <  1:1562598/140‑1 (MQ=255)
                                                                     ggCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCg                                                                 >  1:1851201/1‑140 (MQ=255)
                                                                     ggCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCg                                                                 >  2:1775073/1‑140 (MQ=255)
                                                                       ccGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGa                                                               <  2:805712/140‑1 (MQ=255)
                                                                        cGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGAt                                                              >  1:1043616/1‑140 (MQ=255)
                                                                         gaagaaCATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGAtt                                                             >  2:1972413/1‑140 (MQ=255)
                                                                               cATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGa                                                               >  2:1540316/1‑132 (MQ=255)
                                                                               cATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGatca                                                       >  1:23724/1‑140 (MQ=255)
                                                                               cATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGatca                                                       >  1:536109/1‑140 (MQ=255)
                                                                               cATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGatca                                                       >  1:2031632/1‑140 (MQ=255)
                                                                                          tgCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCcgcg                                            <  1:1230017/140‑1 (MQ=255)
                                                                                          tgCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCcgcg                                            <  2:117442/140‑1 (MQ=255)
                                                                                          tgCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCcgcg                                            <  2:1337891/140‑1 (MQ=255)
                                                                                            cTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCcgcgcg                                          >  2:574486/1‑140 (MQ=255)
                                                                                                 cGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGcgtccgt                                     >  1:192280/1‑140 (MQ=255)
                                                                                                   cAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCg                                   <  2:23724/140‑1 (MQ=255)
                                                                                                    aaCCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCg                                   >  2:198136/1‑139 (MQ=255)
                                                                                                    aaCCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCg                                   <  1:198136/139‑1 (MQ=255)
                                                                                                      ccGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATg                                >  1:667035/1‑140 (MQ=255)
                                                                                                         tGGCGCGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATggg                              >  1:988270/1‑139 (MQ=255)
                                                                                                           gcgcGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGAt                                 >  1:521027/1‑134 (MQ=255)
                                                                                                           gcgcGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGAt                                 <  2:521027/134‑1 (MQ=255)
                                                                                                           gcgcGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTaa                           >  2:282313/1‑140 (MQ=255)
                                                                                                           gcgcGTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTaa                           >  2:529410/1‑140 (MQ=255)
                                                                                                            cgcgTATTGAGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTaaa                          <  1:1298345/140‑1 (MQ=255)
                                                                                                                     aGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACAttt                 >  1:1321021/1‑140 (MQ=255)
                                                                                                                     aGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACAttt                 <  1:416720/140‑1 (MQ=255)
                                                                                                                     aGCAGTTGTTTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACAt                   <  1:2333510/138‑1 (MQ=255)
                                                                                                                          ttgttTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGAt            >  2:1443281/1‑140 (MQ=255)
                                                                                                                          ttgctTCACCAGCCGCACGATGGCGTTACCGGGGTAAACACCGATTATGACGATCTCAACAAGAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGGAAAACAACATTTGCGAt            >  2:2146567/1‑140 (MQ=255)
                                                                                                                           tgttTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATg           >  2:402222/1‑140 (MQ=255)
                                                                                                                            gttTCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGa          >  1:121954/1‑140 (MQ=255)
                                                                                                                               tCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAAcc       <  2:1043616/140‑1 (MQ=255)
                                                                                                                               tCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAAc        >  1:1264775/1‑139 (MQ=255)
                                                                                                                               tCAGCAGCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAAc        <  2:1264775/139‑1 (MQ=255)
                                                                                                                                cagcagCCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCt      <  1:529410/140‑1 (MQ=255)
                                                                                                                                    agcCGCACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCtcgtc  >  2:116323/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
AAGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCACACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTC  >  NC_000913/4264777‑4265048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A