Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F28 I1 R1
|
180 |
66.5 |
2263572 |
99.4% |
2249990 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,267,446 |
C→T |
G111G (GGC→GGT) |
tyrB → |
tyrosine aminotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,267,446 | 0 | C | T | 100.0%
| 309.3
/ NA
| 91 | G111G (GGC→GGT) | tyrB | tyrosine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (48/43); total (48/43) |
CGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGCGA > NC_000913/4267316‑4267576
|
cGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTc > 1:853288/1‑140 (MQ=255)
gAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGaa > 1:1095467/1‑140 (MQ=255)
gAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGaa > 2:965556/1‑140 (MQ=255)
gCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCt > 1:835645/1‑140 (MQ=255)
tAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACt > 1:819807/1‑140 (MQ=255)
tAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACt > 2:214727/1‑140 (MQ=255)
aTCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGaa > 2:199711/1‑140 (MQ=255)
aTCGCCATGCCATTGCACCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGaa > 1:605865/1‑140 (MQ=255)
gccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGt > 2:297918/1‑140 (MQ=255)
gccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGt > 1:398468/1‑140 (MQ=255)
gccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGt > 1:739554/1‑140 (MQ=255)
ccatTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTc < 2:160981/140‑1 (MQ=255)
ttGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTgg > 1:844910/1‑140 (MQ=255)
tGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTggg > 2:726181/1‑140 (MQ=255)
tGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTggg > 1:392567/1‑140 (MQ=255)
cgccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTc < 2:293597/140‑1 (MQ=255)
cgccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTc > 1:14151/1‑140 (MQ=255)
cgccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTc < 2:844910/140‑1 (MQ=255)
gccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCa < 1:214727/140‑1 (MQ=255)
gccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCa < 2:819807/140‑1 (MQ=255)
ccgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAg < 2:14151/140‑1 (MQ=255)
cgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAg > 2:970217/1‑139 (MQ=255)
cgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAg < 1:970217/139‑1 (MQ=255)
cgcTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGc < 2:605865/140‑1 (MQ=255)
ctgctgTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGa < 1:999266/140‑1 (MQ=255)
ctgctgTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGa > 1:444730/1‑140 (MQ=255)
tgctgTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGAt < 2:1130908/140‑1 (MQ=255)
gctgTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATc < 2:835645/140‑1 (MQ=255)
tttGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTAc < 2:432180/140‑1 (MQ=255)
ttGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTAcc < 2:392567/140‑1 (MQ=255)
tGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCt < 2:853288/140‑1 (MQ=255)
tGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCa < 2:19394/125‑1 (MQ=255)
tGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCa > 1:19394/1‑125 (MQ=255)
cGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGaa > 2:1895/1‑140 (MQ=255)
cGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGaa > 2:763151/1‑140 (MQ=255)
cGGACCATCCGGAACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGaa > 2:864503/1‑140 (MQ=255)
aCCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTAc < 2:1124976/130‑1 (MQ=255)
aCCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTAc < 2:615988/130‑1 (MQ=255)
aCCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTAc > 1:1124976/1‑130 (MQ=255)
aCCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTAc > 1:615988/1‑130 (MQ=255)
aCCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAAc > 1:417001/1‑140 (MQ=255)
tCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACg < 2:91201/140‑1 (MQ=255)
aaaCAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATAtt > 2:331285/1‑140 (MQ=255)
aaaCAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATAtt > 1:995473/1‑140 (MQ=255)
aaaCAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATAtt > 1:1036564/1‑140 (MQ=255)
caacaGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGc < 1:571488/140‑1 (MQ=255)
acaGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCg > 2:535797/1‑140 (MQ=255)
acaGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCg > 2:969870/1‑140 (MQ=255)
acaGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCg > 2:915318/1‑140 (MQ=255)
acaGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCg > 2:257936/1‑140 (MQ=255)
cgcgTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGc < 2:444730/140‑1 (MQ=255)
cgcgTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGc < 1:297918/140‑1 (MQ=255)
gcgTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCt > 2:616727/1‑140 (MQ=255)
cgTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTg > 1:580552/1‑140 (MQ=255)
cAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTc > 1:858309/1‑140 (MQ=255)
ccATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGaa < 2:1036564/140‑1 (MQ=255)
ccATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGaa < 2:739554/140‑1 (MQ=255)
ccATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGaa > 2:288055/1‑140 (MQ=255)
ttCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTg < 1:915318/140‑1 (MQ=255)
ttCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTg < 1:213192/140‑1 (MQ=255)
tCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGa < 1:763151/140‑1 (MQ=255)
tCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGa < 1:864503/140‑1 (MQ=255)
tCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGa < 1:288055/140‑1 (MQ=255)
tCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGa < 1:331285/140‑1 (MQ=255)
cAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAg > 2:268720/1‑140 (MQ=255)
aaCCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTa > 1:494884/1‑140 (MQ=255)
aaCCCTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTa > 1:301748/1‑140 (MQ=255)
cccTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACt < 2:243493/140‑1 (MQ=255)
cccTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACt < 1:535797/140‑1 (MQ=255)
cccTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACt < 1:1895/140‑1 (MQ=255)
cTTGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTa > 2:1003238/1‑140 (MQ=255)
tGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACt < 1:558908/136‑1 (MQ=255)
tGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACt > 2:558908/1‑136 (MQ=255)
tGGCGGCTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcc > 1:1115349/1‑140 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAccc < 2:494884/140‑1 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAccc > 2:561901/1‑140 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAccc < 1:257936/140‑1 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcc < 1:801201/139‑1 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcc > 2:467467/1‑139 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcc < 1:467467/139‑1 (MQ=255)
ggcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcc > 2:801201/1‑139 (MQ=255)
gcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcccc < 1:726181/140‑1 (MQ=255)
gcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcccc < 2:921306/140‑1 (MQ=255)
gcggcTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTAcccc < 2:301748/140‑1 (MQ=255)
cTCCGGGGCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTgat > 1:677339/1‑138 (MQ=255)
gggCATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGAc > 1:174089/1‑140 (MQ=255)
cATTGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGaa < 1:965556/140‑1 (MQ=255)
ttGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGc < 1:616727/140‑1 (MQ=255)
ttGAAAGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGc > 2:141023/1‑140 (MQ=255)
aaaGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCAATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGCGa < 2:357831/139‑1 (MQ=255)
aaaGTGGGTGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCAATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGCGa > 1:357831/1‑139 (MQ=255)
|
CGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGCGA > NC_000913/4267316‑4267576
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
