Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F28 I1 R1 159 82.1 2830106 99.3% 2810295 139.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 31,404 G→A L196L (CTG→CTA)  carB → carbamoyl phosphate synthetase subunit beta

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091331,4040GA98.3% 198.7 / ‑4.3 59L196L (CTG→CTA) carBcarbamoyl phosphate synthetase subunit beta
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (31/27);  total (31/28)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

ATGGAAGAAGCGCTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTGGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTCGATGCGATGGGC  >  NC_000913/31270‑31539
                                                                                                                                      |                                                                                                                                       
aTGGAAGAAGCGCTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGGATCGCTTATAAACGTGAAGAGGTTGAAGAAATTTGCGCCCGCGGGCTAGAtcc                                                                                                                                    >  2:784745/1‑139 (MQ=255)
     agaagCGCTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGAtctctctc                                                                                                                               <  1:1033469/140‑1 (MQ=255)
           gcTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGGATCGCTTATAACCGTGAAGAGGTTTAAGAAAATTTCGCCCGCGGTCTAGATCTCTCTCccacca                                                                                                                         >  2:440347/1‑140 (MQ=255)
             tGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCaaa                                                                                                                       <  2:815167/140‑1 (MQ=255)
             tGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCaaa                                                                                                                       <  2:201168/140‑1 (MQ=255)
                   ttGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTg                                                                                                                 <  1:1346749/140‑1 (MQ=255)
                       cGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCtga                                                                                                             >  1:599594/1‑140 (MQ=255)
                           gACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGt                                                                                                                   <  1:452034/130‑1 (MQ=255)
                           gACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGt                                                                                                                   >  2:452034/1‑130 (MQ=255)
                            aCGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCtgattgat                                                                                                        <  1:440347/140‑1 (MQ=255)
                                      cccGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGa                                                                                              >  1:261778/1‑140 (MQ=255)
                                      cccGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGGCTAGATCTCTCTCCGACCAAAGAGGTGCTGATTGATGAGTCGCTGa                                                                                              >  2:1160550/1‑140 (MQ=255)
                                       ccGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGAt                                                                                             <  2:599594/140‑1 (MQ=255)
                                            cATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCt                                                                                        >  1:1332080/1‑140 (MQ=255)
                                                 ttCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGaaa                                                                                   <  2:786944/140‑1 (MQ=255)
                                                 ttCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGaaa                                                                                   >  2:65338/1‑140 (MQ=255)
                                                    gCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGaaa                                                                                   <  2:552143/137‑1 (MQ=255)
                                                    gCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGaaa                                                                                   >  1:552143/1‑137 (MQ=255)
                                                    gCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAagag                                                                                <  2:386406/140‑1 (MQ=255)
                                                    gCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAagag                                                                                >  1:1390281/1‑140 (MQ=255)
                                                      ccATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTa                                                                              <  1:1109144/140‑1 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATTGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGAt                                                                                             >  1:1209066/1‑122 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATTGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGAt                                                                                             <  2:1209066/122‑1 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCt                                                                                        <  1:1157484/127‑1 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCt                                                                                        >  2:1157484/1‑127 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAagatcacgc                                                                           >  1:335845/1‑134 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTa                                                                              <  1:11701/137‑1 (MQ=255)
                                                         tCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTa                                                                              >  2:11701/1‑137 (MQ=255)
                                                           cTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACgaga                                                                         >  2:1122433/1‑140 (MQ=255)
                                                           cTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTATAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACgaga                                                                         <  2:24464/140‑1 (MQ=255)
                                                                  aTGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgt                                                                  >  2:1117339/1‑140 (MQ=255)
                                                                   tGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtg                                                                 >  2:1138879/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACgaga                                                                         >  2:486352/1‑131 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACgaga                                                                         <  1:486352/131‑1 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtgg                                                                >  2:345542/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtgg                                                                >  1:1183325/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtgg                                                                >  2:241648/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtgg                                                                >  1:56525/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtgg                                                                >  1:878968/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtgg                                                                >  2:1179014/1‑140 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAg                                                                   <  2:797339/137‑1 (MQ=255)
                                                                    gggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAg                                                                   >  1:797339/1‑137 (MQ=255)
                                                                     ggCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtggt                                                               >  1:1085219/1‑140 (MQ=255)
                                                                      gCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAgtggtg                                                              <  2:261778/140‑1 (MQ=255)
                                                                                     gTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGAc                                               <  1:345542/140‑1 (MQ=255)
                                                                                     gTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGAc                                               <  2:56525/140‑1 (MQ=255)
                                                                                                      gAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTg                              >  1:502677/1‑140 (MQ=255)
                                                                                                        agagTTTGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGct                            <  1:65338/140‑1 (MQ=255)
                                                                                                            tttGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTAt                        >  1:1082419/1‑140 (MQ=255)
                                                                                                             ttGAAGAAATTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATc                       >  2:620507/1‑140 (MQ=255)
                                                                                                                     aTTTGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACtt               <  2:164309/140‑1 (MQ=255)
                                                                                                                      tttGCGCCCGCGGTCTGGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTc              <  2:517070/140‑1 (MQ=255)
                                                                                                                      tttGCGCCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTc              >  2:207480/1‑140 (MQ=255)
                                                                                                                      tttGCGCCCGCGGCCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTc              >  2:120922/1‑140 (MQ=255)
                                                                                                                          cgcCCGCGGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTcgatg          >  1:47185/1‑140 (MQ=255)
                                                                                                                               gcgGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTcgatgcgatg     <  1:1122433/140‑1 (MQ=255)
                                                                                                                               gcgGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTcgatgcgatg     <  1:419332/140‑1 (MQ=255)
                                                                                                                               gcgGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTcgatgcgatg     <  2:1085219/140‑1 (MQ=255)
                                                                                                                               gcgGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTcgatgcgatg     <  2:1390281/140‑1 (MQ=255)
                                                                                                                                cgGTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTCGATGCGATgg    >  1:1080875/1‑140 (MQ=255)
                                                                                                                                  gTCTAGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTCGATGCGATGGGc  <  1:1117339/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                       
ATGGAAGAAGCGCTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTGGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTCGATGCGATGGGC  >  NC_000913/31270‑31539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A