Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F28 I1 R1
|
159 |
82.1 |
2830106 |
99.3% |
2810295 |
139.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,197,062 |
T→C |
L197L (TTA→CTA) |
yehF → |
putative protein YehF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,197,062 | 0 | T | C | 99.3%
| 555.8
/ ‑4.7
| 148 | L197L (TTA→CTA) | yehF | putative protein YehF |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (58/89); total (59/89) |
| Fisher's exact test for biased strand distribution p-value = 3.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 |
Only 100 of 149 total aligned reads displayed.
TTACGTCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCA > NC_000913/2196927‑2197198
|
ttACGTCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTAcc < 2:875482/140‑1 (MQ=255)
ttACGTCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTAcc < 2:491115/140‑1 (MQ=255)
gTCCCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCa < 1:469581/140‑1 (MQ=255)
tCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCAc > 1:944820/1‑140 (MQ=255)
cTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAg > 1:364800/1‑140 (MQ=255)
cTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAg > 2:813736/1‑140 (MQ=255)
aGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCGGTaa < 1:852303/140‑1 (MQ=255)
aGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTaa < 1:902810/140‑1 (MQ=255)
aGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTaa < 1:837478/140‑1 (MQ=255)
aGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTaa < 2:364800/140‑1 (MQ=255)
gTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCt < 1:613744/140‑1 (MQ=255)
aGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGt > 1:832584/1‑140 (MQ=255)
gtgtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACt > 1:183603/1‑140 (MQ=255)
tgtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTc > 1:1167769/1‑140 (MQ=255)
tgtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTc > 1:1086765/1‑140 (MQ=255)
tgtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTc > 2:1147486/1‑140 (MQ=255)
tgtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTc > 1:14007/1‑140 (MQ=255)
tgtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTc > 1:311568/1‑140 (MQ=255)
gtCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCa > 1:316925/1‑140 (MQ=255)
tCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCAc > 1:914064/1‑140 (MQ=255)
gCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACgg < 1:473436/140‑1 (MQ=255)
cAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGc > 1:79040/1‑140 (MQ=255)
aCGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCAc < 2:695054/140‑1 (MQ=255)
aCGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCAc > 2:938623/1‑140 (MQ=255)
cGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACt > 2:118873/1‑140 (MQ=255)
ggATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTtg > 1:984275/1‑140 (MQ=255)
ggATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTtg < 2:944820/140‑1 (MQ=255)
taataaAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTtgaaa > 1:1052521/1‑140 (MQ=255)
aaaaCAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTtgaaatgaa < 2:1319817/140‑1 (MQ=255)
aaaaCAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTtgaaatgaa < 2:565806/140‑1 (MQ=255)
cAGCCACATTTGCCTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGc > 1:893621/1‑140 (MQ=255)
cAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGc > 1:896531/1‑140 (MQ=255)
cAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGc > 2:987332/1‑140 (MQ=255)
cAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGc > 1:396330/1‑140 (MQ=255)
aGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGca < 2:1116883/140‑1 (MQ=255)
gCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcac < 1:1076300/140‑1 (MQ=255)
gCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcac < 1:760938/140‑1 (MQ=255)
gCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcac < 2:896531/140‑1 (MQ=255)
gCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcac < 1:987332/140‑1 (MQ=255)
gCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcac < 2:721388/140‑1 (MQ=255)
gCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcac < 2:574913/140‑1 (MQ=255)
ccACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcaca > 2:1126092/1‑140 (MQ=255)
ccACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcaca > 1:65184/1‑140 (MQ=255)
ccACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcaca > 1:1169398/1‑140 (MQ=255)
ccACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGcaca > 2:691829/1‑140 (MQ=255)
caTTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGa < 1:114395/140‑1 (MQ=255)
tttGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGata < 2:984275/140‑1 (MQ=255)
aCTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATaaa < 2:781304/140‑1 (MQ=255)
cTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAg > 2:1357226/1‑140 (MQ=255)
cTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAg > 1:487016/1‑140 (MQ=255)
ttCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGt < 1:714842/140‑1 (MQ=255)
ttCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGt < 1:1111686/140‑1 (MQ=255)
cAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGc > 1:622263/1‑140 (MQ=255)
cgcCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTg > 2:73538/1‑140 (MQ=255)
cgcCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTg > 2:160448/1‑140 (MQ=255)
cgcCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTg > 2:1011145/1‑140 (MQ=255)
gcCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGa < 1:1011145/140‑1 (MQ=255)
gcCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGa < 1:163050/140‑1 (MQ=255)
ccTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAg < 2:601867/140‑1 (MQ=255)
cTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAgg < 1:17859/140‑1 (MQ=255)
cTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGAACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAgg < 1:519975/140‑1 (MQ=255)
tGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGa < 2:907310/140‑1 (MQ=255)
tGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGa < 1:691829/140‑1 (MQ=255)
cTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGtt < 1:1301931/140‑1 (MQ=255)
tGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCa > 1:643454/1‑140 (MQ=255)
tGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCa > 2:343346/1‑140 (MQ=255)
gCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGa > 1:1134844/1‑140 (MQ=255)
gCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGa < 2:767104/140‑1 (MQ=255)
cAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGAt > 1:195115/1‑140 (MQ=255)
cAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGAt < 1:813736/140‑1 (MQ=255)
cAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGAt > 1:985396/1‑140 (MQ=255)
tCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGaa > 1:402462/1‑140 (MQ=255)
cGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAg < 2:1167769/140‑1 (MQ=255)
cGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAg < 2:471095/140‑1 (MQ=255)
cGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAg < 2:893621/140‑1 (MQ=255)
gCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGTAAgg < 2:825583/140‑1 (MQ=255)
gCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCTCGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAgg < 2:65184/140‑1 (MQ=255)
gCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAgg < 2:497823/140‑1 (MQ=255)
gCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAgg < 1:1298556/140‑1 (MQ=255)
cAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCgg > 2:26364/1‑140 (MQ=255)
aGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGt < 2:1052521/140‑1 (MQ=255)
aGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGt < 1:999117/140‑1 (MQ=255)
ggCGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTc < 2:311568/140‑1 (MQ=255)
cGATCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTg < 2:790590/140‑1 (MQ=255)
aTCAGTCAGATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGa > 1:1319885/1‑140 (MQ=255)
cagtcagATCGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAat < 2:447822/140‑1 (MQ=255)
cGACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTg < 1:118873/140‑1 (MQ=255)
gACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGa < 2:1086765/140‑1 (MQ=255)
gACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGa < 1:741995/140‑1 (MQ=255)
gACGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGa < 1:361027/140‑1 (MQ=255)
aCGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGAt > 2:1282852/1‑140 (MQ=255)
cGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATg < 2:195115/140‑1 (MQ=255)
cGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATg < 2:1171399/140‑1 (MQ=255)
cGGCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATg < 2:643454/140‑1 (MQ=255)
ggCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATg < 2:137719/130‑1 (MQ=255)
ggCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATg > 1:137719/1‑130 (MQ=255)
ggCCTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGt < 1:1233339/140‑1 (MQ=255)
ccTGAAAACAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGtaa > 2:538927/1‑140 (MQ=255)
aaaaCAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTaataat < 1:1357226/140‑1 (MQ=255)
aaaCAACACAGCTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAataata < 2:79040/140‑1 (MQ=255)
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TTACGTCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCA > NC_000913/2196927‑2197198
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
