Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F28 I1 R1
|
159 |
82.1 |
2830106 |
99.3% |
2810295 |
139.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,187,989 |
A→T |
pseudogene (558/2434 nt) |
yqiG → |
putative outer membrane usher protein YqiG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,187,989 | 0 | A | T | 100.0%
| 402.2
/ NA
| 113 | pseudogene (558/2434 nt) | yqiG | putative outer membrane usher protein YqiG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (65/48); total (65/48) |
Only 100 of 114 total aligned reads displayed.
ATGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGATTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATACTGAATCCT > NC_000913/3187854‑3188123
|
aTGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTAc > 1:596243/1‑140 (MQ=255)
ttGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTAc > 2:1280441/1‑140 (MQ=255)
ttGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTAc > 1:174726/1‑140 (MQ=255)
tGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc < 2:617739/140‑1 (MQ=255)
tGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc < 2:556295/140‑1 (MQ=255)
tGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc < 2:438882/140‑1 (MQ=255)
tGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc < 2:1173667/140‑1 (MQ=255)
gggCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAg > 1:247010/1‑140 (MQ=255)
gggCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAg > 2:443245/1‑140 (MQ=255)
gggCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAg > 1:903559/1‑140 (MQ=255)
gggCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAg > 2:10996/1‑140 (MQ=255)
ggCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGt > 1:375514/1‑140 (MQ=255)
gCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc < 1:699289/136‑1 (MQ=255)
gCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc > 2:699289/1‑136 (MQ=255)
gACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACaa > 1:945525/1‑140 (MQ=255)
tACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc > 1:1315619/1‑124 (MQ=255)
tACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATc < 2:1315619/124‑1 (MQ=255)
cAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCa > 1:923877/1‑140 (MQ=255)
tttATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCaaaa > 2:721262/1‑140 (MQ=255)
ccTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCg > 1:289912/1‑140 (MQ=255)
ctctCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGa < 1:556283/140‑1 (MQ=255)
ctctCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGa < 2:1186483/140‑1 (MQ=255)
tctcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGcc < 1:79668/133‑1 (MQ=255)
tctcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGcc > 2:79668/1‑133 (MQ=255)
tctcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGAc < 1:1280441/140‑1 (MQ=255)
tctcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGAc > 2:1015259/1‑140 (MQ=255)
ctcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGAcc > 1:1064590/1‑140 (MQ=255)
tcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCa > 2:1077859/1‑140 (MQ=255)
tcATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCa > 2:1064318/1‑140 (MQ=255)
tGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTgg > 2:377067/1‑140 (MQ=255)
tGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTgg > 1:555121/1‑140 (MQ=255)
tGCACCACATCAGGGAGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTgg > 2:26146/1‑140 (MQ=255)
ccacATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGAttt > 1:972355/1‑140 (MQ=255)
cacaTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGAtttt > 1:575431/1‑140 (MQ=255)
acaTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTc > 1:683482/1‑140 (MQ=255)
caTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTcc > 1:809118/1‑140 (MQ=255)
caTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTcc > 1:219681/1‑140 (MQ=255)
caTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTcc > 2:165888/1‑140 (MQ=255)
caTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTcc > 1:1122938/1‑140 (MQ=255)
aTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCcg > 1:1008054/1‑140 (MQ=255)
aTCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCcg < 2:972355/140‑1 (MQ=255)
tCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCcgc < 2:542374/140‑1 (MQ=255)
cAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCcgcg > 1:856275/1‑140 (MQ=255)
ggCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtat > 2:287559/1‑140 (MQ=255)
ggCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtat > 1:48384/1‑140 (MQ=255)
ggCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtat > 2:1325306/1‑140 (MQ=255)
ggCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtat > 2:1377286/1‑140 (MQ=255)
ggCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtat > 1:1040803/1‑140 (MQ=255)
cGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtattt > 1:1128000/1‑140 (MQ=255)
aTAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtatttat > 1:1132219/1‑140 (MQ=255)
aTAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtatttat < 2:596243/140‑1 (MQ=255)
tAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGtatttatt > 1:1031436/1‑140 (MQ=255)
aaaaTATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGc < 2:1064590/140‑1 (MQ=255)
ccTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCa > 1:514058/1‑140 (MQ=255)
cTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCaa > 1:1306152/1‑140 (MQ=255)
tATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCaat < 2:1040803/140‑1 (MQ=255)
tATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCaat < 1:1077859/140‑1 (MQ=255)
tATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCaat < 1:796230/140‑1 (MQ=255)
ggCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCaatgaat > 1:762972/1‑140 (MQ=255)
gCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCaatgaatg < 1:721262/140‑1 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa > 2:1196732/1‑140 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 2:1128000/140‑1 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 2:514058/140‑1 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 2:1132219/140‑1 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 2:683482/140‑1 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 1:1064318/140‑1 (MQ=255)
aGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 1:1015259/140‑1 (MQ=255)
aGGCTCGGGTTAATCTTGGGGCCTGGGGCCTGAGTACTGTATACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCCTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCa < 2:1250218/140‑1 (MQ=255)
gCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCaaa > 2:401909/1‑140 (MQ=255)
gCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCaaa > 2:261136/1‑140 (MQ=255)
cTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCaaaa > 1:783655/1‑140 (MQ=255)
ggggTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaact < 2:48384/140‑1 (MQ=255)
ggggTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaact < 2:1351200/140‑1 (MQ=255)
gggATAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaacta > 1:1083243/1‑140 (MQ=255)
ggTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaactaa > 1:1411437/1‑140 (MQ=255)
ggTTAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaactaa > 1:261654/1‑140 (MQ=255)
ttAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaactaact > 1:708798/1‑140 (MQ=255)
tAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAactaacta < 2:856275/140‑1 (MQ=255)
tAATCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAactaacta < 2:1144994/140‑1 (MQ=255)
aTCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaact < 1:820643/133‑1 (MQ=255)
aTCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaact > 2:820643/1‑133 (MQ=255)
aTCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaact < 1:68104/133‑1 (MQ=255)
aTCTTGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAaact > 2:68104/1‑133 (MQ=255)
ttGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGt < 1:261136/140‑1 (MQ=255)
tGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGt > 1:1100418/1‑139 (MQ=255)
tGGGGCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGt < 2:1100418/139‑1 (MQ=255)
gggCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCaa > 1:676199/1‑140 (MQ=255)
gggCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCaa > 1:811894/1‑140 (MQ=255)
ggCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAactaacta > 1:897164/1‑131 (MQ=255)
ggCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAactaacta < 2:897164/131‑1 (MQ=255)
gCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATa < 2:811894/140‑1 (MQ=255)
gCCTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATa < 2:219681/140‑1 (MQ=255)
ccTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCa > 1:923644/1‑136 (MQ=255)
ccTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCa < 2:923644/136‑1 (MQ=255)
cTGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACg > 1:187663/1‑140 (MQ=255)
tGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGa > 2:284214/1‑140 (MQ=255)
tGGCGCCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGa > 2:696760/1‑140 (MQ=255)
gcgcCTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATa > 2:1088008/1‑140 (MQ=255)
cTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATACTGa < 2:375514/140‑1 (MQ=255)
cTGCGTACTGTTTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATACTGa < 2:289912/140‑1 (MQ=255)
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ATGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGATTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATACTGAATCCT > NC_000913/3187854‑3188123
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
