Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F28 I1 R1 180 66.5 2263572 99.4% 2249990 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,388,635 A→G G59G (GGT→GGC)  tpx ← lipid hydroperoxide peroxidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,388,6350AG100.0% 237.7 / NA 67G59G (GGT→GGC) tpxlipid hydroperoxide peroxidase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (42/25);  total (42/25)

GTGATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACACCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAATTGGCGA  >  NC_000913/1388498‑1388771
                                                                                                                                         |                                                                                                                                        
gTGATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGcc                                                                                                                                        <  2:1016807/140‑1 (MQ=255)
  gATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCgg                                                                                                                                      >  1:930532/1‑140 (MQ=255)
  gATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCgg                                                                                                                                      >  2:458999/1‑140 (MQ=255)
  gATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCgg                                                                                                                                      <  1:515368/140‑1 (MQ=255)
       cGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCa                                                                                                                                 >  2:680992/1‑140 (MQ=255)
          tgttCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCACAAACGCCGGTATCAATa                                                                                                                              >  2:79820/1‑140 (MQ=255)
            ttCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACt                                                                                                                            >  1:1106942/1‑140 (MQ=255)
               aGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGcc                                                                                                                                        >  2:857251/1‑125 (MQ=255)
                 aCCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGa                                                                                                                       >  2:983968/1‑140 (MQ=255)
                  ccTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGaa                                                                                                                      >  1:655428/1‑140 (MQ=255)
                      cTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCa                                                                                                                                 <  2:647873/125‑1 (MQ=255)
                      cTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCa                                                                                                                                 >  1:647873/1‑125 (MQ=255)
                      cTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATg                                                                                                                  >  1:603761/1‑140 (MQ=255)
                      cTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATg                                                                                                                  >  2:661798/1‑140 (MQ=255)
                      cTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATg                                                                                                                  >  2:845345/1‑140 (MQ=255)
                      cTGCGCCGCAGAAACGAGACTGGGCGAACCGCAGATCAGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTAGTGATGCGCCGCAAACGCCGGTATCAATACTCGGGTAAATg                                                                                                                  >  2:999901/1‑140 (MQ=255)
                             gcAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCa                                                                                                           >  2:635641/1‑140 (MQ=255)
                                      agaCTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGtt                                                                                                  <  1:635641/140‑1 (MQ=255)
                                      agaCTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGtt                                                                                                  <  1:661798/140‑1 (MQ=255)
                                         cTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTAc                                                                                               >  1:620633/1‑140 (MQ=255)
                                            ggCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCg                                                                                            <  2:1049238/140‑1 (MQ=255)
                                             gCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGc                                                                                           >  1:314284/1‑140 (MQ=255)
                                                aaCGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCaaa                                                                                        <  2:314284/140‑1 (MQ=255)
                                                      aGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGAcc                                                                                  >  1:1002428/1‑140 (MQ=255)
                                                           ggCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAggg                                                                             <  2:293466/140‑1 (MQ=255)
                                                           ggCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAggg                                                                             <  1:911078/140‑1 (MQ=255)
                                                           ggCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCACAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAggg                                                                             <  1:79820/140‑1 (MQ=255)
                                                             cAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTg                                                                           <  1:999901/140‑1 (MQ=255)
                                                                  aTACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTc                                                                      >  1:467329/1‑140 (MQ=255)
                                                                       caGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTcagaca                                                                 >  1:349233/1‑140 (MQ=255)
                                                                          cacaACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGAt                                                              >  1:1006231/1‑140 (MQ=255)
                                                                            caACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCt                                                            >  1:104418/1‑140 (MQ=255)
                                                                             aaCGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCtt                                                           >  1:807149/1‑140 (MQ=255)
                                                                               cGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCtttt                                                         >  1:36275/1‑140 (MQ=255)
                                                                                ggTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTg                                                        >  2:886717/1‑140 (MQ=255)
                                                                                  tgttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGcc                                                      >  1:720967/1‑140 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTcagac                                                                  <  2:648201/126‑1 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTcagac                                                                  >  1:648201/1‑126 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCAc                                                    >  1:903348/1‑140 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCAc                                                    <  2:655428/140‑1 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCAc                                                    >  2:520585/1‑140 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCAc                                                    >  1:266285/1‑140 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCAc                                                    <  2:930532/140‑1 (MQ=255)
                                                                                    ttgtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCAc                                                    >  1:806161/1‑140 (MQ=255)
                                                                                      gtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACga                                                  <  2:467329/140‑1 (MQ=255)
                                                                                      gtCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACga                                                  <  1:458999/140‑1 (MQ=255)
                                                                                            ctcAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTaa                                            >  2:701757/1‑140 (MQ=255)
                                                                                                 ttGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTc                                       >  1:233002/1‑140 (MQ=255)
                                                                                                    ccAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTgc                                    <  1:701757/140‑1 (MQ=255)
                                                                                                     cAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTgcg                                   <  1:886717/140‑1 (MQ=255)
                                                                                                        ttGGTTAAACTTACGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCtt                                <  2:720967/140‑1 (MQ=255)
                                                                                                                    aCGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCt                    >  2:264954/1‑140 (MQ=255)
                                                                                                                     cGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTg                   >  1:1024407/1‑140 (MQ=255)
                                                                                                                     cGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTg                   <  2:806161/140‑1 (MQ=255)
                                                                                                                     cGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTg                   >  2:1047105/1‑140 (MQ=255)
                                                                                                                     cGTACTGATGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTg                   <  1:1047105/140‑1 (MQ=255)
                                                                                                                            aTGCGGCGCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATg            >  1:966254/1‑140 (MQ=255)
                                                                                                                              gcggcgCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGa              <  2:61265/136‑1 (MQ=255)
                                                                                                                              gcggcgCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGa              >  1:61265/1‑136 (MQ=255)
                                                                                                                              gcggcgCAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGa          >  2:954451/1‑140 (MQ=255)
                                                                                                                                 gcgcAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAAtt       >  2:53393/1‑140 (MQ=255)
                                                                                                                                 gcgcAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAAtt       >  1:29899/1‑140 (MQ=255)
                                                                                                                                   gcAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGa              >  2:265345/1‑131 (MQ=255)
                                                                                                                                   gcAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGa              <  1:265345/131‑1 (MQ=255)
                                                                                                                                   gcAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAATTgg     <  2:29899/140‑1 (MQ=255)
                                                                                                                                    cAAACGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAATTGGc    >  2:97499/1‑140 (MQ=255)
                                                                                                                                      aaCGCCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAATTGGCGa  <  2:903348/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
GTGATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCAGAGATACACAGCACAACGGTGTTGTCGATCTCAGTTGCCAGTTGGTTAAACTTACGTACTGATGCGGCGCAAACACCGGTATCAATACTCGGGAAAATGTTCAGCACTTTGCGTTTACCCGCAAACTGACCGAGGGTGACGTCAGACAGATCTTTTGCCACGAGAGTAAAAGTCTGCGCTTTGCTACCCGCCTGCGGGATGGAATTGGCGA  >  NC_000913/1388498‑1388771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A