Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F28 I1 R1 180 66.5 2263572 99.4% 2249990 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,444,553 T→C H501H (CAT→CAC)  ydbH → PF11739 family protein YdbH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,444,5530TC100.0% 231.9 / NA 65H501H (CAT→CAC) ydbHPF11739 family protein YdbH
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (33/32);  total (33/32)

GTGAGTGGCATGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGAT  >  NC_000913/1444417‑1444685
                                                                                                                                        |                                                                                                                                    
gTGAGTGGCATGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCAcccc                                                                                                                                   <  2:1091403/140‑1 (MQ=255)
     tGGCATGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCtt                                                                                                                              >  1:482795/1‑140 (MQ=255)
         aTGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAgc                                                                                                                          >  1:382204/1‑140 (MQ=255)
           gACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAgcgg                                                                                                                        <  1:477206/140‑1 (MQ=255)
              aGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGgcgc                                                                                                                     <  1:208267/140‑1 (MQ=255)
               gCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGgcgcg                                                                                                                    >  2:813505/1‑140 (MQ=255)
                cACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAgcgg                                                                                                                        >  2:477448/1‑135 (MQ=255)
                cACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAgcgg                                                                                                                        <  1:477448/135‑1 (MQ=255)
                          cTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGa                                                                                                         >  2:302293/1‑140 (MQ=255)
                             aCCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGc                                                                                                      <  1:723078/140‑1 (MQ=255)
                               cGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCg                                                                                                    >  1:369975/1‑140 (MQ=255)
                                       ccACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACg                                                                                            >  1:155964/1‑140 (MQ=255)
                                       ccACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACg                                                                                            >  2:1116710/1‑140 (MQ=255)
                                       ccACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACg                                                                                            <  1:525834/140‑1 (MQ=255)
                                       ccACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACg                                                                                            >  1:873196/1‑140 (MQ=255)
                                       ccACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACg                                                                                            >  2:714538/1‑140 (MQ=255)
                                                tCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGc                                                                                                 >  1:152794/1‑126 (MQ=255)
                                                tCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGc                                                                                                 <  2:152794/126‑1 (MQ=255)
                                                tCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACt                                                                                   <  2:1065994/140‑1 (MQ=255)
                                                tCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACt                                                                                   >  1:283454/1‑140 (MQ=255)
                                                  gACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTgg                                                                                 <  2:316078/140‑1 (MQ=255)
                                                  gACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTgg                                                                                 >  1:569313/1‑140 (MQ=255)
                                                     cAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCGCAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTggcgg                                                                              <  1:901346/140‑1 (MQ=255)
                                                     cAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTggcgg                                                                              <  2:369975/140‑1 (MQ=255)
                                                        ttACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGAGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAg                                                                           >  1:568976/1‑140 (MQ=255)
                                                         tACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAgt                                                                          <  1:1005049/140‑1 (MQ=255)
                                                          aCAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTggcgg                                                                              <  2:161138/135‑1 (MQ=255)
                                                          aCAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTggcgg                                                                              >  1:161138/1‑135 (MQ=255)
                                                                cGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTAc                                                                   >  2:760360/1‑140 (MQ=255)
                                                                 ggTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTAcc                                                                  >  1:44866/1‑140 (MQ=255)
                                                                  gTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCg                                                                 >  2:19953/1‑140 (MQ=255)
                                                                  gTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCg                                                                 >  2:639946/1‑140 (MQ=255)
                                                                  gTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCg                                                                 >  2:539903/1‑140 (MQ=255)
                                                                  gTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCg                                                                 >  1:896137/1‑140 (MQ=255)
                                                                  gTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCg                                                                 >  2:69289/1‑140 (MQ=255)
                                                                   tACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGc                                                                >  1:997742/1‑140 (MQ=255)
                                                                   tACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGc                                                                >  2:433080/1‑140 (MQ=255)
                                                                   tACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGc                                                                >  2:86083/1‑140 (MQ=255)
                                                                   tACGATGACGGTAGAAAAACCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGc                                                                >  1:205346/1‑140 (MQ=255)
                                                                      gATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCAt                                                             <  1:433080/140‑1 (MQ=255)
                                                                        tGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCa                                                           >  2:730215/1‑140 (MQ=255)
                                                                           cGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAAcc                                                        <  1:730215/140‑1 (MQ=255)
                                                                             gTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCtt                                                      >  2:987222/1‑140 (MQ=255)
                                                                                           aTTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCg                                        >  2:660112/1‑140 (MQ=255)
                                                                                           aTTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCg                                        <  1:69289/140‑1 (MQ=255)
                                                                                             tAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGAt                                      <  2:482795/140‑1 (MQ=255)
                                                                                              aaTTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATg                                     <  1:40978/140‑1 (MQ=255)
                                                                                                ttCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATggg                                   <  1:1116710/140‑1 (MQ=255)
                                                                                                 tctcGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGgc                                  <  1:279822/140‑1 (MQ=255)
                                                                                                 tctcGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGgc                                  <  1:302293/140‑1 (MQ=255)
                                                                                                  ctcGACAAGCCCATCGTCTGGGTACGTGACGCACAGCCCCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGgcg                                 <  1:660112/140‑1 (MQ=255)
                                                                                                    cGACAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGcgcg                               <  1:813505/140‑1 (MQ=255)
                                                                                                      aCAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGAt                             >  2:466160/1‑140 (MQ=255)
                                                                                                       cAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATc                            <  2:896137/140‑1 (MQ=255)
                                                                                                       cAAGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATc                            <  2:205346/140‑1 (MQ=255)
                                                                                                        aaGCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATcc                           <  2:283454/140‑1 (MQ=255)
                                                                                                          gCCCATCGTCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATccta                         <  2:997742/140‑1 (MQ=255)
                                                                                                                  tCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTc                 <  1:86083/140‑1 (MQ=255)
                                                                                                                  tCTGGGTACGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTc                 <  1:987222/140‑1 (MQ=255)
                                                                                                                         aCGTGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTa          >  2:935514/1‑140 (MQ=255)
                                                                                                                            tGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAg       >  1:600470/1‑140 (MQ=255)
                                                                                                                            tGACGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAg       <  2:155964/140‑1 (MQ=255)
                                                                                                                              aCGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGc     <  2:569313/140‑1 (MQ=255)
                                                                                                                              aCGCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGc     <  2:382204/140‑1 (MQ=255)
                                                                                                                                gCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGa   >  2:836440/1‑140 (MQ=255)
                                                                                                                                gCACAGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGa   >  2:837027/1‑140 (MQ=255)
                                                                                                                                 cacaGCACCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGAt  <  2:564651/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                    
GTGAGTGGCATGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGAT  >  NC_000913/1444417‑1444685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A