Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A10 F28 I1 R1	180	66.5	2263572	99.4%	2249990	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,857,330	A→G	L147P (CTG→CCG)	ydjI ←	putative aldolase YdjI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,857,330	0	A	G	100.0%	217.3 / NA	61	L147P (CTG→CCG)	ydjI	putative aldolase YdjI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/22); total (39/22)

TGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACG  >  NC_000913/1857193‑1857466

tGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGgc                                                                                                                                        >  1:748383/1‑140 (MQ=255)

   cgacCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCt                                                                                                                                     <  1:1105885/140‑1 (MQ=255)

   cgacCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCt                                                                                                                                     <  2:653894/140‑1 (MQ=255)

     acCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTc                                                                                                                                   >  1:769465/1‑140 (MQ=255)

       cTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCt                                                                                                                                 >  1:1046086/1‑140 (MQ=255)

         cAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCa                                                                                                                               >  1:183673/1‑140 (MQ=255)

                cAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACgg                                                                                                                        >  2:874689/1‑140 (MQ=255)

                      tgGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCAt                                                                                                                  >  1:275747/1‑140 (MQ=255)

                            tGACGTATAAACCCTATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGa                                                                                                            <  2:363671/140‑1 (MQ=255)

                                  ataAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGcc                                                                                                      >  2:183196/1‑140 (MQ=255)

                                   taAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                          <  2:512904/135‑1 (MQ=255)

                                   taAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                          >  1:512904/1‑135 (MQ=255)

                                   taAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGccc                                                                                                     >  2:1106329/1‑140 (MQ=255)

                                        cccATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAAtt                                                                                                >  2:259896/1‑140 (MQ=255)

                                          cATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTcc                                                                                              <  2:447698/140‑1 (MQ=255)

                                          cATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGCCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTcc                                                                                              >  2:1014338/1‑140 (MQ=255)

                                            tGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGc                                                                                            <  1:183196/140‑1 (MQ=255)

                                            tGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGc                                                                                            <  1:874689/140‑1 (MQ=255)

                                                 gTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTa                                                                                       >  2:361860/1‑140 (MQ=255)

                                                 gTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGCCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTa                                                                                       <  1:1014338/140‑1 (MQ=255)

                                                  ttGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTAc                                                                                      >  2:164173/1‑140 (MQ=255)

                                                     ccGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCgg                                                                                   <  1:164173/140‑1 (MQ=255)

                                                      cGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGa                                                                                  <  2:769465/140‑1 (MQ=255)

                                                        aTGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAAt                                                                                >  1:538945/1‑140 (MQ=255)

                                                           gCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATAcc                                                                             >  2:165846/1‑140 (MQ=255)

                                                             gACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCa                                                                           <  2:211516/140‑1 (MQ=255)

                                                              aCAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAg                                                                          <  1:165846/140‑1 (MQ=255)

                                                                  ccAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGa                                                                      >  2:249184/1‑140 (MQ=255)

                                                                                 ccGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACa                                                       <  1:193199/140‑1 (MQ=255)

                                                                                  cGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAg                                                      <  1:133796/140‑1 (MQ=255)

                                                                                  cGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAg                                                      >  2:709651/1‑140 (MQ=255)

                                                                                  cGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTATACCGGAATACCCAGCGGATGGAAGAAATCGACAg                                                      <  1:1106329/140‑1 (MQ=255)

                                                                                   gTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGc                                                     <  1:241942/140‑1 (MQ=255)

                                                                                              aaaTTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTa                                          >  1:218419/1‑140 (MQ=255)

                                                                                                   cAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGa                                     <  1:249184/140‑1 (MQ=255)

                                                                                                     gccgccTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAat                                   >  1:701780/1‑140 (MQ=255)

                                                                                                         ccTGGTCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGTATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATAttt                               >  1:624987/1‑140 (MQ=255)

                                                                                                              tCAGGATCGGTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTttcttc                          <  2:538945/140‑1 (MQ=255)

                                                                                                                       gTATAGTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCaaa                 <  2:407291/140‑1 (MQ=255)

                                                                                                                            gTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCgg            >  1:22134/1‑140 (MQ=255)

                                                                                                                            gTGATAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCgg            >  1:1122665/1‑140 (MQ=255)

                                                                                                                               aTAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAg         >  1:504440/1‑140 (MQ=255)

                                                                                                                               aTAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAg         >  1:807391/1‑140 (MQ=255)

                                                                                                                               aTAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAg         >  1:1107963/1‑140 (MQ=255)

                                                                                                                               aTAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACAGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAg         >  1:999630/1‑140 (MQ=255)

                                                                                                                                tAGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGc        >  1:339967/1‑140 (MQ=255)

                                                                                                                                 aGCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCa       >  1:177869/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  2:374978/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  2:14924/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  2:1119058/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  1:993175/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  2:565453/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  2:566177/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  1:950466/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  1:803416/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  1:713669/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  2:868404/1‑140 (MQ=255)

                                                                                                                                  gCCCGCCGGCACTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCAt      >  1:1450/1‑140 (MQ=255)

                                                                                                                                   cccGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGTATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATc     <  2:624987/140‑1 (MQ=255)

                                                                                                                                   cccGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATc     <  2:803416/140‑1 (MQ=255)

                                                                                                                                      gCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACg  <  2:218419/140‑1 (MQ=255)

TGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACG  >  NC_000913/1857193‑1857466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A