Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F28 I1 R1 180 66.5 2263572 99.4% 2249990 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,419,382 (C)6→7 coding (407/555 nt) yfcE ← phosphodiesterase YfcE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,419,3761.C100.0% 242.8 / NA 68E138G (GAG→GGG) yfcEphosphodiesterase YfcE
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (36/32);  total (36/32)

ATCGCGACCTGCGCAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCT‑CCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAGTAAT  >  NC_000913/2419244‑2419507
                                                                                                                                     |                                                                                                                                   
aTCGCGACCTGCGCAATGATACTTTGATCATTGAGTGCGATTACCCTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCT‑ccccccc                                                                                                                              <  1:616243/140‑2 (MQ=255)
 tCGCGACCTGCGCAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCT‑cccccccg                                                                                                                             <  1:586340/140‑3 (MQ=255)
     gACCTGCGCAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGt                                                                                                                          >  1:993151/1‑140 (MQ=255)
      aCCTGCGCAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCT‑ccc                                                                                                                                  >  2:261199/1‑130 (MQ=255)
      aCCTGCGCAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCT‑ccc                                                                                                                                  <  1:261199/130‑1 (MQ=255)
             cAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCAc                                                                                                                  <  1:434217/140‑1 (MQ=255)
                   tACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAg                                                                                                            <  1:777124/140‑1 (MQ=255)
                     cTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGAt                                                                                                          >  1:516376/1‑140 (MQ=255)
                        tGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTg                                                                                                                      >  1:464018/1‑125 (MQ=255)
                        tGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTg                                                                                                                      <  2:464018/125‑1 (MQ=255)
                        tGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACCCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATggg                                                                                                       >  2:643150/1‑140 (MQ=255)
                          aTCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGAt                                                                                                          <  2:864659/135‑1 (MQ=255)
                          aTCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGAt                                                                                                          >  1:864659/1‑135 (MQ=255)
                          aTCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTa                                                                                                     <  2:993151/140‑1 (MQ=255)
                          aTCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTa                                                                                                     >  1:733300/1‑140 (MQ=255)
                          aTCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTa                                                                                                     >  2:1001191/1‑140 (MQ=255)
                            cATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATg                                                                                                   >  1:727705/1‑140 (MQ=255)
                             aTTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGa                                                                                                  <  1:505265/140‑1 (MQ=255)
                               tGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAg                                                                                                            <  2:837029/128‑1 (MQ=255)
                               tGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAg                                                                                                            >  1:837029/1‑128 (MQ=255)
                               tGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGAcc                                                                                                >  1:768864/1‑140 (MQ=255)
                                  gTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTa                                                                                             >  2:536021/1‑140 (MQ=255)
                                   tGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTa                                                                                                     <  2:1073140/131‑1 (MQ=255)
                                   tGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTa                                                                                                     >  1:1073140/1‑131 (MQ=255)
                                   tGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTac                                                                                            >  2:543788/1‑140 (MQ=255)
                                   tGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTac                                                                                            <  2:727705/140‑1 (MQ=255)
                                    gCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTaca                                                                                           >  2:383222/1‑140 (MQ=255)
                                       aTTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTAt                                                                                                    >  1:132831/1‑128 (MQ=255)
                                       aTTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTAt                                                                                                    <  2:132831/128‑1 (MQ=255)
                                       aTTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCa                                                                                        <  1:543788/140‑1 (MQ=255)
                                        ttACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAg                                                                                       <  1:417024/140‑1 (MQ=255)
                                            acTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGcaca                                                                                   <  2:543650/140‑1 (MQ=255)
                                            acTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGcaca                                                                                   <  1:1077480/140‑1 (MQ=255)
                                                  tACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTc                                                                             >  1:911370/1‑140 (MQ=255)
                                                  tACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTc                                                                             <  2:733300/140‑1 (MQ=255)
                                                     gTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTgg                                                                          >  2:1036835/1‑140 (MQ=255)
                                                      tCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGt                                                                         >  1:672544/1‑140 (MQ=255)
                                                      acATTATCCAGCATGCCATAACTCGCCAGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGt                                                                         >  1:187032/2‑140 (MQ=255)
                                                            tCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGtt                                                                              <  1:250649/129‑1 (MQ=255)
                                                            tCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGtt                                                                              >  2:250649/1‑129 (MQ=255)
                                                              cAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAgca                                                                 <  1:536021/140‑1 (MQ=255)
                                                                 cATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAgcaggc                                                              >  1:992563/1‑140 (MQ=255)
                                                                 cATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAgcaggc                                                              >  1:272209/1‑140 (MQ=255)
                                                                      cATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGAtt                                                         >  1:562462/1‑140 (MQ=255)
                                                                      cATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTCCTGGTTTAAAGCAGGCAGAtt                                                         >  1:372956/1‑140 (MQ=255)
                                                                               ccGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGcc                                                <  1:643150/140‑1 (MQ=255)
                                                                               ccGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGcc                                                >  2:532247/1‑140 (MQ=255)
                                                                                cGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGcc                                                >  2:5218/1‑139 (MQ=255)
                                                                                cGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGcc                                                <  1:5218/139‑1 (MQ=255)
                                                                                cGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCa                                               >  1:500911/1‑140 (MQ=255)
                                                                                        cGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATg                                       >  2:630997/1‑140 (MQ=255)
                                                                                           cTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGAcc                                    <  1:383222/140‑1 (MQ=255)
                                                                                             ttCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCAt                                  <  2:675478/140‑1 (MQ=255)
                                                                                                        cACCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAAc                       >  1:1095293/1‑140 (MQ=255)
                                                                                                         aCCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCGAAAAGATGACCATGCGTCAAAAACa                      >  1:218686/1‑140 (MQ=255)
                                                                                                         aCCGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACa                      >  2:1009141/1‑140 (MQ=255)
                                                                                                          ccGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAg                     >  1:666596/1‑140 (MQ=255)
                                                                                                           cGAGCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGa                    >  2:92702/1‑140 (MQ=255)
                                                                                                              gCCGGGGTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACgt                 <  1:1036835/140‑1 (MQ=255)
                                                                                                                  gggTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACgttgtt             >  1:257816/1‑140 (MQ=255)
                                                                                                                    gTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCGAAAAGATGACCATGCGTCAAAAACAGACGTTGtttt           <  2:218686/140‑1 (MQ=255)
                                                                                                                    gTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGtttt           <  2:161626/140‑1 (MQ=255)
                                                                                                                    gTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGtttt           <  2:1095293/140‑1 (MQ=255)
                                                                                                                    gTTGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGtttt           <  1:95886/140‑1 (MQ=255)
                                                                                                                      tGAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTc         <  1:300642/140‑1 (MQ=255)
                                                                                                                       gAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTcc        <  2:562462/140‑1 (MQ=255)
                                                                                                                       gAAGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTcc        <  1:532247/140‑1 (MQ=255)
                                                                                                                         aGTGGAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAg      >  2:594406/1‑140 (MQ=255)
                                                                                                                            ggAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAGTaa   <  1:1009141/140‑1 (MQ=255)
                                                                                                                            ggAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAGTaa   <  2:905906/140‑1 (MQ=255)
                                                                                                                             gAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAGTAAt  >  2:140909/1‑140 (MQ=255)
                                                                                                                             gAAAATCTCCCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAGTAAt  <  1:512443/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                   
ATCGCGACCTGCGCAATGATACTTTGATCATTGAGTGCGATTACACTAAGTACGTCATTATCCAGCATGCCATAACTCGCCGGATTACCGCCTTTCGGAATACTCACCGAGCCGGGGTTGAAGTGGAAAATCT‑CCCCCCGCTGTTCTGCCACTGGCAGATGGGTATGACCGTACACCAGCACATCGTTCTGGTTTAAAGCAGGCAGATTTTCCGGGCCAAAAAGATGACCATGCGTCAAAAACAGACGTTGTTTTTCCAGTAAT  >  NC_000913/2419244‑2419507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A