Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A10 F28 I1 R1	180	66.5	2263572	99.4%	2249990	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,744,694	T→C	T216A (ACC→GCC)	trmD ←	tRNA m(1)G37 methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,744,694	0	T	C	100.0%	228.7 / NA	65	T216A (ACC→GCC)	trmD	tRNA m(1)G37 methyltransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (28/37); total (28/37)

TGATATCTCGGGGGCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGTACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGCCGCGTATAGTGCGGGCAATCCAGCAATCCTTCAGCAAA  >  NC_000913/2744557‑2744829

tGATATCTCGGGGGCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCAc                                                                                                                                       <  2:174263/140‑1 (MQ=255)

  atatCTCGGGGGCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACgg                                                                                                                                     >  2:252185/1‑140 (MQ=255)

  atatCTCGGGGGCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGACACgg                                                                                                                                     <  2:749990/140‑1 (MQ=255)

   tatCTCGGGGGCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGc                                                                                                                                    >  1:946913/1‑140 (MQ=255)

          ggggCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGa                                                                                                                             >  1:252846/1‑140 (MQ=255)

           gggCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCCTCTAACCCAGGCACGGCCCAGCGAc                                                                                                                            <  1:854680/140‑1 (MQ=255)

            ggCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGa                                                                                                                             <  1:1062119/138‑1 (MQ=255)

            ggCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGa                                                                                                                             >  2:1062119/1‑138 (MQ=255)

                 aCGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTc                                                                                                                      >  1:1016300/1‑140 (MQ=255)

                 aCGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTc                                                                                                                      >  1:157103/1‑140 (MQ=255)

                  cGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCa                                                                                                                     >  2:66376/1‑140 (MQ=255)

                    ccatcccatcATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCaaa                                                                                                                   <  2:110145/140‑1 (MQ=255)

                       tcccatcATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGc                                                                                                                >  1:143058/1‑140 (MQ=255)

                        cccatcATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGcc                                                                                                               >  2:227623/1‑140 (MQ=255)

                                 tttATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTa                                                                                                      >  1:1126408/1‑140 (MQ=255)

                                  ttATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTAt                                                                                                     <  1:440786/140‑1 (MQ=255)

                                     tGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTAtctc                                                                                                  >  1:255950/1‑140 (MQ=255)

                                       ttGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCgg                                                                                                >  1:109346/1‑140 (MQ=255)

                                        tGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGc                                                                                               >  2:1023438/1‑140 (MQ=255)

                                        tGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGc                                                                                               >  1:1067476/1‑140 (MQ=255)

                                          cTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCAt                                                                                             <  2:581233/140‑1 (MQ=255)

                                          cTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCAt                                                                                             >  2:1085742/1‑140 (MQ=255)

                                            gttgtGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATgg                                                                                           <  1:977775/140‑1 (MQ=255)

                                             ttgtGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCa                                                                                              >  1:997213/1‑136 (MQ=255)

                                             ttgtGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCa                                                                                              <  2:997213/136‑1 (MQ=255)

                                             ttgtGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGt                                                                                          <  1:1023438/140‑1 (MQ=255)

                                                  cGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTAtc                                                                                                    >  2:592028/1‑125 (MQ=255)

                                                  cGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTAtc                                                                                                    <  1:592028/125‑1 (MQ=255)

                                                  cGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCgg                                                                                                >  2:597828/1‑129 (MQ=255)

                                                  cGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCgg                                                                                                <  1:597828/129‑1 (MQ=255)

                                                  cGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGccc                                                                                     <  2:946913/140‑1 (MQ=255)

                                                    tgtTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGa                                                                                   >  2:739338/1‑140 (MQ=255)

                                                    tgtTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAACCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGa                                                                                   >  1:385371/1‑140 (MQ=255)

                                                     gtTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGAc                                                                                  >  1:729866/1‑140 (MQ=255)

                                                            tttGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAaca                                                                           >  2:449851/1‑140 (MQ=255)

                                                                aaCTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTgg                                                                       <  1:66376/140‑1 (MQ=255)

                                                                  cTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCg                                                                     >  2:934078/1‑140 (MQ=255)

                                                                   tCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCgg                                                                    <  2:109346/140‑1 (MQ=255)

                                                                    ccGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGa                                                                   <  2:218069/140‑1 (MQ=255)

                                                                           cAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCa                                                            <  1:449851/140‑1 (MQ=255)

                                                                           cAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCa                                                            <  2:1126408/140‑1 (MQ=255)

                                                                           cAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCa                                                            <  2:644473/140‑1 (MQ=255)

                                                                             aCCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATc                                                          <  2:224404/140‑1 (MQ=255)

                                                                             aCCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATc                                                          <  1:227623/140‑1 (MQ=255)

                                                                              ccTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATcc                                                         <  2:1016300/140‑1 (MQ=255)

                                                                                ttgcttgcTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCt                                                       <  2:729866/140‑1 (MQ=255)

                                                                                     tgctCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTaa                                                  >  2:132453/1‑140 (MQ=255)

                                                                                           tcagtcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTc                                            <  1:425502/140‑1 (MQ=255)

                                                                                             agtcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAg                                          <  1:132453/140‑1 (MQ=255)

                                                                                              gtcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAgg                                         <  1:252185/140‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCt                                                       >  2:823597/1‑125 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCt                                                       <  1:823597/125‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  2:255950/140‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  1:97446/140‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  1:1085742/140‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  2:776749/140‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  2:157103/140‑1 (MQ=255)

                                                                                               tcagAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  2:143058/140‑1 (MQ=255)

                                                                                                 agagCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        >  1:956558/1‑138 (MQ=255)

                                                                                                 agagCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGc                                        <  2:956558/138‑1 (MQ=255)

                                                                                                    gCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTaa                                                  >  1:617638/1‑125 (MQ=255)

                                                                                                    gCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTaa                                                  <  2:617638/125‑1 (MQ=255)

                                                                                                                       cAGGTCTTCTAAGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGCCGCGTATAGTGCGGGCAATCCAGc                >  2:471875/1‑140 (MQ=255)

                                                                                                                                 aaGCCAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGCCGCGTATAGTGCGGGCAATCCAGCAATCCTTCAg      <  2:252846/140‑1 (MQ=255)

                                                                                                                                     cAGGCACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACCCCTCAGGCCGCGTATAGTGCGGGCAATCCAGCAATCCTTCAGCaaa  <  1:201362/140‑1 (MQ=255)

TGATATCTCGGGGGCTTACGCCATCCCATCATGTTTATGTTGCTGTTGTGCGTGTTCCGTTTTGAACTCCGCCAGCAACCTTGCTTGCTCTTCAGTCAGAGCCAGGTTTTCCAGAAGTTCAGGTCTTCTAAGCCAGGTACGGCCCAGCGACTGTTTCAAACGCCAGCGACGTATCTCGGCATGGTTGCCCGACAGTAACACTGGCGGAACTTCCATCCCTTCTAACACCTCAGGCCGCGTATAGTGCGGGCAATCCAGCAATCCTTCAGCAAA  >  NC_000913/2744557‑2744829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A