Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 260 73.5 2514320 99.3% 2496719 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 205,802 A→G D226G (GAC→GGC)  dnaE → DNA polymerase III subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913205,8020AG100.0% 219.8 / NA 62D226G (GAC→GGC) dnaEDNA polymerase III subunit alpha
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (20/42);  total (20/42)

CTATCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGACGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTGTAACGTAAC  >  NC_000913/205665‑205934
                                                                                                                                         |                                                                                                                                    
cTATCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTcggcg                                                                                                                                    >  2:519778/1‑140 (MQ=255)
  aTCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGAt                                                                                                                                  <  2:449757/140‑1 (MQ=255)
   tCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATc                                                                                                                                 >  1:26310/1‑140 (MQ=255)
    cTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTcggcga                                                                                                                                   <  2:869084/137‑1 (MQ=255)
    cTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTcggcga                                                                                                                                   >  1:869084/1‑137 (MQ=255)
    cTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATcc                                                                                                                                >  1:610267/1‑140 (MQ=255)
      gCACGCGGCGCTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTa                                                                                                                              <  1:860842/140‑1 (MQ=255)
         cgcgGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAAc                                                                                                                           >  1:628481/1‑140 (MQ=255)
         cgcgGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAAc                                                                                                                           <  2:609900/140‑1 (MQ=255)
          gcggcgGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACg                                                                                                                          >  1:770186/1‑140 (MQ=255)
           cggcggTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGc                                                                                                                         <  2:763763/140‑1 (MQ=255)
           cggcggTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGc                                                                                                                         <  2:499723/140‑1 (MQ=255)
              cggTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCcg                                                                                                                      <  2:1248582/140‑1 (MQ=255)
              cggTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCcg                                                                                                                      <  2:164536/140‑1 (MQ=255)
                        ggCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTAtt                                                                                                            >  1:614274/1‑140 (MQ=255)
                          gggAAGCGCACGGTTTGCCCTTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCATCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCTATCCTAAACGCCCGCGTAACTTTTcg                                                                                                          <  2:1062843/139‑1 (MQ=255)
                           ggAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTcgc                                                                                                         <  2:770186/140‑1 (MQ=255)
                           ggAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTcgc                                                                                                         <  2:729714/140‑1 (MQ=255)
                            gAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTcgcc                                                                                                        <  2:802213/140‑1 (MQ=255)
                              aGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTcgccgc                                                                                                      <  2:845542/140‑1 (MQ=255)
                               gcgcgcGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgca                                                                                                     <  1:867696/140‑1 (MQ=255)
                               gcgcgcGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgca                                                                                                     <  2:26310/140‑1 (MQ=255)
                               gcgcgcGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgca                                                                                                     <  2:204726/140‑1 (MQ=255)
                                cgcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcag                                                                                                    <  1:117569/140‑1 (MQ=255)
                                cgcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcag                                                                                                    <  1:1228113/140‑1 (MQ=255)
                                cgcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcag                                                                                                    <  2:610267/140‑1 (MQ=255)
                                cgcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcag                                                                                                    <  2:593787/140‑1 (MQ=255)
                                cgcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcag                                                                                                    <  1:482296/140‑1 (MQ=255)
                                cgcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcag                                                                                                    <  1:480920/140‑1 (MQ=255)
                                 gcgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcagc                                                                                                   <  2:614274/140‑1 (MQ=255)
                                  cgcgGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCgcagca                                                                                                  >  2:65146/1‑140 (MQ=255)
                                           cccGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCg                                                                                         <  1:1677/140‑1 (MQ=255)
                                              gtcgtGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAg                                                                                      <  1:643988/140‑1 (MQ=255)
                                                  tGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGaa                                                                                  <  1:749232/140‑1 (MQ=255)
                                                  tGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGaa                                                                                  <  1:519778/140‑1 (MQ=255)
                                                          aaCGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGAt                                                                          >  1:1016666/1‑140 (MQ=255)
                                                                gTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGa                                                                    <  1:1072992/140‑1 (MQ=255)
                                                                 tGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAg                                                                   <  1:142655/140‑1 (MQ=255)
                                                                 tGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAg                                                                   >  2:141547/1‑140 (MQ=255)
                                                                 tGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAg                                                                   >  1:776334/1‑140 (MQ=255)
                                                                 tGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAg                                                                   >  1:1181157/1‑140 (MQ=255)
                                                                     cTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGt                                                               >  2:337106/1‑140 (MQ=255)
                                                                          tCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGcc                                                          >  1:110125/1‑140 (MQ=255)
                                                                               agcagcGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACAt                                                     >  1:961321/1‑140 (MQ=255)
                                                                                  agcGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACa                                                      >  1:785090/1‑136 (MQ=255)
                                                                                  agcGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACa                                                      <  2:785090/136‑1 (MQ=255)
                                                                                    cGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCg                                                >  1:173908/1‑140 (MQ=255)
                                                                                    cGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCg                                                >  2:520749/1‑140 (MQ=255)
                                                                                       cTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAg                                             <  1:359668/140‑1 (MQ=255)
                                                                                       cTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAg                                             <  2:1181157/140‑1 (MQ=255)
                                                                                         ttGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGcc                                           <  1:1181310/140‑1 (MQ=255)
                                                                                         ttGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGcc                                           <  2:110125/140‑1 (MQ=255)
                                                                                         ttGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGcc                                           <  1:171885/140‑1 (MQ=255)
                                                                                              gCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGc                                      >  2:238407/1‑140 (MQ=255)
                                                                                                acacGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCa                                    <  1:337106/140‑1 (MQ=255)
                                                                                                acacGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCa                                    <  1:520749/140‑1 (MQ=255)
                                                                                                                 cgATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGcc                   <  1:609892/140‑1 (MQ=255)
                                                                                                                 cgATCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGcc                   <  2:961321/140‑1 (MQ=255)
                                                                                                                   aTCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACATCGTTGAGATc                      <  1:1212848/135‑1 (MQ=255)
                                                                                                                   aTCCACGACGGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACATCGTTGAGATc                      >  2:1212848/1‑135 (MQ=255)
                                                                                                                       acgacgGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGc             <  1:118566/140‑1 (MQ=255)
                                                                                                                        cgacgGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCt            <  1:238407/140‑1 (MQ=255)
                                                                                                                         gacgGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTg           <  1:977028/140‑1 (MQ=255)
                                                                                                                         gacgGCTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTg           <  1:379130/140‑1 (MQ=255)
                                                                                                                              cTTTACCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTgtaacg      >  1:1013496/1‑140 (MQ=255)
                                                                                                                                  aCCCTCGGCGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTgtaacgtaac  >  2:512476/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                    
CTATCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGACGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTGTAACGTAAC  >  NC_000913/205665‑205934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A