Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
260 |
73.5 |
2514320 |
99.3% |
2496719 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,523,314 |
T→C |
L3S (TTA→TCA) |
yncE → |
PQQ‑like domain‑containing protein YncE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,523,314 | 0 | T | C | 100.0%
| 292.5
/ NA
| 81 | L3S (TTA→TCA) | yncE | PQQ‑like domain‑containing protein YncE |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (46/35); total (46/35) |
CAAGAAATGCTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTTACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAAT > NC_000913/1523180‑1523443
|
cAAGAAATGCTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTc > 2:14922/1‑140 (MQ=255)
cAAGAAATGCTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTc > 2:1000004/1‑140 (MQ=255)
aaGAAATGCTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCa < 2:169505/140‑1 (MQ=255)
tGCTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGtt < 1:1000004/140‑1 (MQ=255)
cTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCa > 1:1055083/1‑132 (MQ=255)
cTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCa < 2:1055083/132‑1 (MQ=255)
aaaaTAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCg < 2:808056/140‑1 (MQ=255)
aataatGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTg > 1:1026240/1‑140 (MQ=255)
aataatGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTg > 2:181235/1‑140 (MQ=255)
gATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCAt > 2:64671/1‑140 (MQ=255)
gATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCAt < 1:75236/140‑1 (MQ=255)
aCCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACt > 2:495276/1‑140 (MQ=255)
aCCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACt > 2:1255980/1‑140 (MQ=255)
aCCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACt < 1:1255980/140‑1 (MQ=255)
aCCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACt < 1:495276/140‑1 (MQ=255)
tCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAg > 1:885248/1‑140 (MQ=255)
cccATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAgg > 1:372127/1‑140 (MQ=255)
ccATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGt > 1:133138/1‑140 (MQ=255)
ttATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCAt > 2:1176582/1‑140 (MQ=255)
ttATAACAAGAGCGTAACGATGATTACACTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCAt > 1:347050/1‑140 (MQ=255)
tataACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCAtt > 2:966079/1‑140 (MQ=255)
tataACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGAGCCTGCGTGGTTCATTACTGTTAGGTTCAtt > 1:348843/1‑140 (MQ=255)
taACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGc > 2:777322/1‑140 (MQ=255)
cAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCttg > 2:435801/1‑140 (MQ=255)
agagCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCttgtt > 2:983817/1‑140 (MQ=255)
gagCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCttgttg > 1:58298/1‑140 (MQ=255)
gagCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCttgttg < 1:64671/140‑1 (MQ=255)
gagCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCttgttg < 1:14922/140‑1 (MQ=255)
gagCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCttgttg < 1:435801/140‑1 (MQ=255)
gCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTgttgtt < 1:1044753/140‑1 (MQ=255)
gCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTgttgtt < 2:607962/140‑1 (MQ=255)
cGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGttt > 1:588100/1‑140 (MQ=255)
cGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGttt > 2:924062/1‑140 (MQ=255)
cGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGttt > 2:870928/1‑140 (MQ=255)
cGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGttt > 1:934858/1‑140 (MQ=255)
cGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGttt > 1:780537/1‑140 (MQ=255)
cGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGttt > 1:804585/1‑140 (MQ=255)
gTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTtc > 2:288925/1‑140 (MQ=255)
tAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTtca < 2:133138/140‑1 (MQ=255)
aCGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTtcatc < 2:409040/140‑1 (MQ=255)
tgatTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTc > 2:1175115/1‑140 (MQ=255)
tACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCGTTACTGTGAGGTTCATTGCTTGTTGTTTCATCATTCAGTa > 2:1108617/1‑140 (MQ=255)
aCGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTAc > 2:1249329/1‑140 (MQ=255)
cGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACg > 1:507839/1‑140 (MQ=255)
cTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCa < 2:780537/140‑1 (MQ=255)
aGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc < 2:804585/140‑1 (MQ=255)
aGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGc > 2:1143026/1‑140 (MQ=255)
gCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGcc > 1:769164/1‑140 (MQ=255)
cGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCg < 1:553977/140‑1 (MQ=255)
cGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCg > 1:15784/1‑140 (MQ=255)
cGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCg < 1:835450/140‑1 (MQ=255)
cGAAGCACTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCg > 2:869220/1‑140 (MQ=255)
gAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGAGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGc < 2:348843/140‑1 (MQ=255)
gAAGCACTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGc < 1:869220/140‑1 (MQ=255)
aGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCag > 1:801012/1‑140 (MQ=255)
tgtgAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAgaagaa > 2:1202755/1‑140 (MQ=255)
tgtgAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAgaagaa > 2:573267/1‑140 (MQ=255)
gAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAAtg < 1:1108617/140‑1 (MQ=255)
agcagcAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAAtgct < 2:372127/140‑1 (MQ=255)
agcagcAAAAATATCGGTTCATCAAAGGGACTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAAtgct < 2:769164/140‑1 (MQ=255)
cagcaAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAAtgctgc > 1:190866/1‑140 (MQ=255)
agcaAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCg > 1:441518/1‑140 (MQ=255)
gcaAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGt > 1:892565/1‑140 (MQ=255)
gcaAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGt > 2:544486/1‑140 (MQ=255)
caAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTa > 1:1110930/1‑140 (MQ=255)
caAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTa > 1:387066/1‑140 (MQ=255)
caAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTa > 1:1226298/1‑140 (MQ=255)
aaaaTATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTaaa < 2:703418/140‑1 (MQ=255)
aaTATCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGc < 1:870928/140‑1 (MQ=255)
atatCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCg < 2:588100/140‑1 (MQ=255)
atatCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCg < 2:885248/140‑1 (MQ=255)
tCGGTTCATCAAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCggta < 2:441518/140‑1 (MQ=255)
catcaAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTaaa > 2:675294/1‑140 (MQ=255)
atcaAAGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAg < 1:966079/140‑1 (MQ=255)
aaGGGAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGc < 2:347050/140‑1 (MQ=255)
ggAGTCGTCATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTa > 2:835467/1‑140 (MQ=255)
tcgtcATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGaa < 1:1249329/140‑1 (MQ=255)
tcgtcATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGaa < 1:298711/140‑1 (MQ=255)
gtcATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAAt < 2:507839/140‑1 (MQ=255)
gtcATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAAt < 1:288925/140‑1 (MQ=255)
gtcATGCATTCACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAAt < 1:181235/140‑1 (MQ=255)
|
CAAGAAATGCTCCACATTTGAGAAAATAATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCGGTTCATCAAAGGGAGTCGTCATGCATTTACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAAT > NC_000913/1523180‑1523443
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
