Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	260	73.5	2514320	99.3%	2496719	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,682,025	C→T	G2G (GGG→GGA)	ydgC ←	GlpM family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,682,025	0	C	T	100.0%	261.9 / NA	75	G2G (GGG→GGA)	ydgC	GlpM family protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (34/41); total (34/41)

TGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTT  >  NC_000913/1681889‑1682158

tGGCAACAATATTATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGtccc                                                                                                                                    <  2:93302/140‑1 (MQ=255)

        atatAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCttttt                                                                                                                            >  2:1084364/1‑140 (MQ=255)

             aTGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCtt                                                                                                                       <  1:1064672/140‑1 (MQ=255)

              tGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGTGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTa                                                                                                                      >  2:1190612/1‑140 (MQ=255)

               gcgcGATAAGCGCATAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTaa                                                                                                                     <  1:970923/140‑1 (MQ=255)

               gcgcGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTaa                                                                                                                     <  2:847468/140‑1 (MQ=255)

               gcgcGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTaa                                                                                                                     <  2:680682/140‑1 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    <  1:858020/140‑1 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    >  2:272640/1‑140 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    >  1:635612/1‑140 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    <  2:413115/140‑1 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    <  1:182937/140‑1 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    >  1:413115/1‑140 (MQ=255)

                cgcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    >  2:638058/1‑140 (MQ=255)

                 gcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCtt                                                                                                                               <  2:449310/128‑1 (MQ=255)

                 gcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCtt                                                                                                                               >  1:449310/1‑128 (MQ=255)

                 gcgATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAaca                                                                                                                   >  2:660682/1‑140 (MQ=255)

                   gATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACt                                                                                                                 >  1:432355/1‑140 (MQ=255)

                   gATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACt                                                                                                                 >  1:107547/1‑140 (MQ=255)

                   gATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACt                                                                                                                 <  1:638058/140‑1 (MQ=255)

                   gATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACt                                                                                                                 <  1:1164644/140‑1 (MQ=255)

                     tAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTc                                                                                                               >  1:162374/1‑140 (MQ=255)

                     tAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTc                                                                                                               >  1:137878/1‑140 (MQ=255)

                           cAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAAc                                                                                                         <  2:208860/140‑1 (MQ=255)

                             aaGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    >  1:1064772/1‑127 (MQ=255)

                             aaGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAac                                                                                                                    <  2:1064772/127‑1 (MQ=255)

                             aaGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACaa                                                                                                       <  2:432355/140‑1 (MQ=255)

                             aaGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCNTTNTACCTTNACACTTCCATAACaa                                                                                                       <  1:900049/140‑1 (MQ=255)

                               ggTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGt                                                                                                     >  1:1183998/1‑140 (MQ=255)

                                gTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGtc                                                                                                    <  2:93236/140‑1 (MQ=255)

                                          gTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGaa                                                                                          <  1:1084364/140‑1 (MQ=255)

                                          gTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGaa                                                                                          >  2:1014518/1‑140 (MQ=255)

                                          gTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGaa                                                                                          >  1:985819/1‑140 (MQ=255)

                                          gTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGaa                                                                                          >  2:759333/1‑140 (MQ=255)

                                                        gCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAAc                                                                            <  2:985819/140‑1 (MQ=255)

                                                        gCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAAc                                                                            <  1:759333/140‑1 (MQ=255)

                                                                      tttCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGa                                                              <  1:1014518/140‑1 (MQ=255)

                                                                      tttCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGa                                                              >  1:679922/1‑140 (MQ=255)

                                                                       ttCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGAt                                                             <  2:596160/140‑1 (MQ=255)

                                                                        tCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGAtt                                                            >  2:860320/1‑140 (MQ=255)

                                                                          gTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGa                                                          <  1:712808/140‑1 (MQ=255)

                                                                                       cacCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTaaaaa                                             <  2:679922/140‑1 (MQ=255)

                                                                                         ccAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                           <  1:679573/140‑1 (MQ=255)

                                                                                          cAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAg                                          >  2:100274/1‑140 (MQ=255)

                                                                                           aaTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                         <  2:1015293/140‑1 (MQ=255)

                                                                                           aaTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                         <  2:137878/140‑1 (MQ=255)

                                                                                           aaTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                         <  2:162374/140‑1 (MQ=255)

                                                                                           aaTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                         >  2:242066/1‑140 (MQ=255)

                                                                                            aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgcg                                        >  1:268014/1‑140 (MQ=255)

                                                                                             tCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgcgc                                       <  2:107547/140‑1 (MQ=255)

                                                                                             tCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgcgc                                       <  2:18821/140‑1 (MQ=255)

                                                                                                  aGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                           <  1:87689/131‑1 (MQ=255)

                                                                                                  aGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                           >  2:87689/1‑131 (MQ=255)

                                                                                                    cACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgcg                                        <  2:330596/132‑1 (MQ=255)

                                                                                                    cACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgcg                                        >  1:330596/1‑132 (MQ=255)

                                                                                                    cACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                         >  1:242282/1‑131 (MQ=255)

                                                                                                    cACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                         <  2:242282/131‑1 (MQ=255)

                                                                                                    cACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTAt                                >  2:879699/1‑140 (MQ=255)

                                                                                                      cTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGcgcg                                      >  2:848048/1‑132 (MQ=255)

                                                                                                      cTACCAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGcgcg                                      <  1:848048/132‑1 (MQ=255)

                                                                                                         ccAGCGCACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGa                           <  1:272640/140‑1 (MQ=255)

                                                                                                             cgcACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGtt                       <  1:19239/140‑1 (MQ=255)

                                                                                                              gcACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTTGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttt                      >  1:541546/1‑140 (MQ=255)

                                                                                                              gcACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttt                      >  2:728506/1‑140 (MQ=255)

                                                                                                              gcACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttt                      >  2:869577/1‑140 (MQ=255)

                                                                                                               cACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACg                         <  1:310447/136‑1 (MQ=255)

                                                                                                               cACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACg                         >  2:310447/1‑136 (MQ=255)

                                                                                                               cACCGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGtttt                     <  1:728506/140‑1 (MQ=255)

                                                                                                                 ccGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTta                   >  2:1256369/1‑140 (MQ=255)

                                                                                                                  cGAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTtat                  <  1:494203/140‑1 (MQ=255)

                                                                                                                   gAGCGCGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTtata                 >  1:871616/1‑140 (MQ=255)

                                                                                                                     gcgcGGCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATc               <  2:785902/140‑1 (MQ=255)

                                                                                                                          gCTTTGATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg          <  1:879699/140‑1 (MQ=255)

                                                                                                                               gATTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAAt     <  1:242066/140‑1 (MQ=255)

                                                                                                                                aTTACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATg    >  2:91341/1‑140 (MQ=255)

                                                                                                                                  tACCAGTCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt  <  1:1232970/140‑1 (MQ=255)

TGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTT  >  NC_000913/1681889‑1682158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A