Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	260	73.5	2514320	99.3%	2496719	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,640,836	G→A	G323G (GGC→GGT)	ispG ←	(E)‑4‑hydroxy‑3‑methylbut‑2‑enyl‑diphosphate synthase (flavodoxin)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,640,836	0	G	A	100.0%	165.5 / NA	56	G323G (GGC→GGT)	ispG	(E)‑4‑hydroxy‑3‑methylbut‑2‑enyl‑diphosphate synthase (flavodoxin)
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (29/27); total (29/27)

GCTGAACGTCAATTCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTGCCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTACCGATA  >  NC_000913/2640700‑2640965

gctgAACGTCAATTCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTaccg                                                                                                                                >  1:610304/1‑140 (MQ=255)

     aCGTCAATTCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGt                                                                                                                           <  2:996301/140‑1 (MQ=255)

          aaTTCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGc                                                                                                                      >  1:1032887/1‑140 (MQ=255)

           aTTCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGcc                                                                                                                     <  2:1032887/140‑1 (MQ=255)

            ttCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCg                                                                                                                    <  2:432148/140‑1 (MQ=255)

             tCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGa                                                                                                                   <  2:142190/140‑1 (MQ=255)

                aCGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAgtg                                                                                                                >  1:760854/1‑140 (MQ=255)

                         gTCCAGCTGCCTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCa                                                                                                       <  2:772171/140‑1 (MQ=255)

                         gTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCAAGCCGGTCTTTGCCCACGCCATCTTAATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCa                                                                                                       <  2:395155/140‑1 (MQ=255)

                            cAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAgcg                                                                                                    >  2:845013/1‑140 (MQ=255)

                             aGCTGACTGGTTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAgcgc                                                                                                   <  1:51350/140‑1 (MQ=255)

                             aGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAgcgc                                                                                                   <  2:1183607/140‑1 (MQ=255)

                             aGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAgcgc                                                                                                   <  1:845013/140‑1 (MQ=255)

                                  aCTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAgcgc                                                                                                   >  2:382930/1‑135 (MQ=255)

                                  aCTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAgcgc                                                                                                   <  1:382930/135‑1 (MQ=255)

                                            gCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCAtt                                                                                    <  1:240788/140‑1 (MQ=255)

                                            gCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCAtt                                                                                    >  1:942254/1‑140 (MQ=255)

                                                            ccAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATa                                                                    >  2:130936/1‑140 (MQ=255)

                                                             cAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATaa                                                                   <  1:1235439/140‑1 (MQ=255)

                                                                  ggTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGaa                                                              <  2:972776/140‑1 (MQ=255)

                                                                  ggTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGaa                                                              <  1:130936/140‑1 (MQ=255)

                                                                   gTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGaaa                                                             >  1:591991/1‑140 (MQ=255)

                                                                    tCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAAc                                                            <  2:610304/140‑1 (MQ=255)

                                                                          atatCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGTTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCAt                                                      <  2:122857/140‑1 (MQ=255)

                                                                          atatCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCAt                                                      <  1:958112/140‑1 (MQ=255)

                                                                             tCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGAt                                                                     >  2:390559/1‑122 (MQ=255)

                                                                             tCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGAt                                                                     <  1:390559/122‑1 (MQ=255)

                                                                                 tgttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtg                                               >  1:258257/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCg                                                    <  2:1244276/134‑1 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCg                                                    >  1:1244276/1‑134 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtga                                              >  1:474967/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtga                                              >  2:686185/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtga                                              >  2:636984/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtga                                              >  1:605785/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtga                                              >  1:645769/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtga                                              >  1:1161030/1‑140 (MQ=255)

                                                                                  gttgtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCAATAATCGAAACGTCCATCGGAGtga                                              >  1:616112/1‑140 (MQ=255)

                                                                                     gtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGa                                                  <  2:216792/133‑1 (MQ=255)

                                                                                     gtCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGa                                                  >  1:216792/1‑133 (MQ=255)

                                                                                      tCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtg                                               >  1:117440/1‑135 (MQ=255)

                                                                                      tCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGtg                                               <  2:117440/135‑1 (MQ=255)

                                                                                       caagagGGTCTTGGGCCACGCCATCTCCATAGAGGCGGCTTTTCTTGTTCCCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGata                                         <  2:645769/138‑1 (MQ=255)

                                                                                           tcGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCtt                                     >  2:807706/2‑140 (MQ=255)

                                                                                           aCGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACACAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCtt                                     >  1:1153097/1‑140 (MQ=255)

                                                                                                         cGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTcc                       >  2:4827/1‑140 (MQ=255)

                                                                                                         cGCCATCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTcc                       <  2:588071/140‑1 (MQ=255)

                                                                                                              tCTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAgcgc                  <  1:636984/140‑1 (MQ=255)

                                                                                                               cTTCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGcgcg                 >  1:245225/1‑140 (MQ=255)

                                                                                                                ttCATAGAGGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGt                <  1:297980/140‑1 (MQ=255)

                                                                                                                     agagGCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAAcc           <  2:942254/140‑1 (MQ=255)

                                                                                                                        ggCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGt                >  2:1150217/1‑132 (MQ=255)

                                                                                                                        ggCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGt                <  1:1150217/132‑1 (MQ=255)

                                                                                                                         gCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTcc                       >  2:757186/1‑124 (MQ=255)

                                                                                                                         gCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTcc                       <  1:757186/124‑1 (MQ=255)

                                                                                                                         gCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTAc       >  2:847224/1‑140 (MQ=255)

                                                                                                                         gCCGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGATGCTCCAGCGCGTTAACCGTAc       >  2:890946/1‑140 (MQ=255)

                                                                                                                          ccGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTAcc      >  2:602676/1‑140 (MQ=255)

                                                                                                                           cGCTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTACCg     >  1:175844/1‑140 (MQ=255)

                                                                                                                             cTTTTCTTGTTACCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTACCGAt   >  2:1180004/1‑140 (MQ=255)

                                                                                                                              ttttttTGTTCCCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCCCCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTACCGATa  <  2:760854/140‑1 (MQ=255)

GCTGAACGTCAATTCGACGCGCTTCGTCCAGCTGACTGGCTTTCGCACGAATGCGTGCTTCCAGCTGGTCGATCATATCGTTGTTGTCCAGACGGTCTTTGCGCACGCCATCTTCATAGAGGCCGCTTTTCTTGTTGCCGCCGGTGACGCCGAGTGTAGAAACCAGCGCCTCACCTGGGCCATTCACCACGCAGCCGATAATCGAAACGTCCATCGGAGTGATGATATCTTCCAGGCGTTGCTCCAGCGCGTTAACCGTACCGATA  >  NC_000913/2640700‑2640965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A