Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 260 73.5 2514320 99.3% 2496719 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,000,976 T→C V211A (GTT→GCT)  xdhA → putative xanthine dehydrogenase molybdenum‑binding subunit XdhA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,000,9760TC100.0% 244.4 / NA 69V211A (GTT→GCT) xdhAputative xanthine dehydrogenase molybdenum‑binding subunit XdhA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/31);  total (38/31)

GCCGACTACCAGGTACAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGTTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGC  >  NC_000913/3000840‑3001110
                                                                                                                                        |                                                                                                                                      
gccgACTACCAGGTACAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTcg                                                                                                                                     <  1:659585/140‑1 (MQ=255)
              aCAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGt                                                                                                                               >  1:750260/1‑132 (MQ=255)
              aCAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGt                                                                                                                               <  2:750260/132‑1 (MQ=255)
                aGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTGCCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAg                                                                                                                     <  1:589522/140‑1 (MQ=255)
                aGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAg                                                                                                                     >  1:181853/1‑140 (MQ=255)
                  gggCACCATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGgc                                                                                                                   >  1:1006287/1‑140 (MQ=255)
                   ggCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGgcg                                                                                                                  >  1:979469/1‑140 (MQ=255)
                   ggCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGgcg                                                                                                                  <  1:26885/140‑1 (MQ=255)
                    gCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGgcgc                                                                                                                 <  1:1026943/140‑1 (MQ=255)
                    gCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGgcgc                                                                                                                 <  1:115452/140‑1 (MQ=255)
                     cACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCt                                                                                                                >  1:405482/1‑140 (MQ=255)
                       cTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCt                                                                                                                >  1:525111/1‑138 (MQ=255)
                       cTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCt                                                                                                                <  2:525111/138‑1 (MQ=255)
                        tATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGa                                                                                                             <  2:198938/140‑1 (MQ=255)
                          tCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGata                                                                                                           >  1:457772/1‑140 (MQ=255)
                          tCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGata                                                                                                           >  1:342698/1‑140 (MQ=255)
                             gACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGtggttggt                                                                                                                        <  2:100637/124‑1 (MQ=255)
                             gACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGtggttggt                                                                                                                        >  1:100637/1‑124 (MQ=255)
                             gACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTc                                                                                                        >  2:636340/1‑140 (MQ=255)
                              aCCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGat                                                                                                            >  2:1040515/1‑135 (MQ=255)
                              aCCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGat                                                                                                            <  1:1040515/135‑1 (MQ=255)
                                  ccGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTgg                                                                                                   >  1:503820/1‑140 (MQ=255)
                                  ccGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTgg                                                                                                   >  1:255747/1‑140 (MQ=255)
                                  ccGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTg                                                                                                    >  1:240138/1‑139 (MQ=255)
                                  ccGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTg                                                                                                    <  2:240138/139‑1 (MQ=255)
                                   cGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGt                                                                                                  <  2:457772/140‑1 (MQ=255)
                                         tCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCg                                                                                            <  1:636340/140‑1 (MQ=255)
                                          cAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGt                                                                                           >  1:45196/1‑140 (MQ=255)
                                          cAACATTGTCACATGGAAAGCGTAACATCGCTGGCATGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGt                                                                                           >  1:564816/1‑140 (MQ=255)
                                             cATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACg                                                                                        >  1:816843/1‑140 (MQ=255)
                                                tGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGt                                                                                     >  1:1195745/1‑140 (MQ=255)
                                                tGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGt                                                                                     >  1:334100/1‑140 (MQ=255)
                                                  tCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGtca                                                                                   >  1:39871/1‑140 (MQ=255)
                                                      aTGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCaa                                                                               <  2:39871/140‑1 (MQ=255)
                                                          aaaGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCa                                                                           >  2:816435/1‑140 (MQ=255)
                                                          aaaGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCa                                                                           >  1:198853/1‑140 (MQ=255)
                                                            aGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCAtt                                                                         >  2:761298/1‑140 (MQ=255)
                                                            aGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCAtt                                                                         >  2:15338/1‑140 (MQ=255)
                                                                        cTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCgg                                                             >  1:1118760/1‑140 (MQ=255)
                                                                           gCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGttt                                                          >  2:1200952/1‑140 (MQ=255)
                                                                           gCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGttt                                                          >  1:388656/1‑140 (MQ=255)
                                                                            cGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGtttt                                                         >  1:40702/1‑140 (MQ=255)
                                                                              tggatggaGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCACGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTgg                                                       >  2:383412/1‑140 (MQ=255)
                                                                                gatggaGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGta                                                     <  2:1118760/140‑1 (MQ=255)
                                                                                    gaggaTGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGtaataa                                                 <  2:45196/140‑1 (MQ=255)
                                                                                    gaggaTGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGtaataa                                                 <  2:405482/140‑1 (MQ=255)
                                                                                       gaTGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCACGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACa                                              <  1:383412/140‑1 (MQ=255)
                                                                                         tGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAgg                                            <  2:1006287/140‑1 (MQ=255)
                                                                                         tGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAgg                                            <  2:979469/140‑1 (MQ=255)
                                                                                         tGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAgg                                            <  2:181853/140‑1 (MQ=255)
                                                                                            cTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATg                                         >  1:813420/1‑140 (MQ=255)
                                                                                              cgcgAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTa                                       <  2:503820/140‑1 (MQ=255)
                                                                                                            gTTTCCAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAAt                         <  2:342698/140‑1 (MQ=255)
                                                                                                                 cAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAAt                         >  1:46332/1‑135 (MQ=255)
                                                                                                                 cAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAAt                         <  2:46332/135‑1 (MQ=255)
                                                                                                                 cAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATggcgg                    <  2:564816/140‑1 (MQ=255)
                                                                                                                 cAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATggcgg                    <  2:40702/140‑1 (MQ=255)
                                                                                                                 cAGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATggcgg                    <  2:334100/140‑1 (MQ=255)
                                                                                                                  aGCACCCAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATggcggc                   >  1:576158/1‑140 (MQ=255)
                                                                                                                       ccAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTcc              >  1:1242395/1‑140 (MQ=255)
                                                                                                                        cAGATCCCGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCt             <  1:1200952/140‑1 (MQ=255)
                                                                                                                           atcacGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATggcgg                    >  1:991872/5‑130 (MQ=255)
                                                                                                                           aTCACGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATggcgg                    <  2:991872/130‑1 (MQ=255)
                                                                                                                             cccGCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCa        <  2:1242395/140‑1 (MQ=255)
                                                                                                                                gCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCa     >  2:1060769/1‑140 (MQ=255)
                                                                                                                                gCACATTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCa     >  1:700050/1‑140 (MQ=255)
                                                                                                                                 cacaTTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCaa    >  1:710888/1‑140 (MQ=255)
                                                                                                                                 cacaTTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCaa    >  1:1235927/1‑140 (MQ=255)
                                                                                                                                   caTTGCTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGc  <  1:15338/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                      
GCCGACTACCAGGTACAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGTTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGC  >  NC_000913/3000840‑3001110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A