Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 260 73.5 2514320 99.3% 2496719 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,207,365 C→T S301S (AGC→AGT)  ttdA → L(+)‑tartrate dehydratase subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,207,3650CT100.0% 221.7 / NA 67S301S (AGC→AGT) ttdAL(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (31/36);  total (31/36)

CGTACATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAA  >  NC_000913/3207230‑3207501
                                                                                                                                       |                                                                                                                                        
cGTACATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGt                                                                                                                                      <  2:503816/140‑1 (MQ=255)
   aCATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGcgcg                                                                                                                                       <  1:372826/136‑1 (MQ=255)
   aCATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGcgcg                                                                                                                                       >  2:372826/1‑136 (MQ=255)
     atatCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGa                                                                                                                                 >  2:171514/1‑140 (MQ=255)
        tCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGaaaa                                                                                                                              >  1:1165197/1‑140 (MQ=255)
        tCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGaaaa                                                                                                                              >  2:602638/1‑140 (MQ=255)
             tCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATc                                                                                                                         >  1:573126/1‑140 (MQ=255)
              cTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATcc                                                                                                                        >  2:517456/1‑140 (MQ=255)
               tGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCt                                                                                                                       >  2:246331/1‑140 (MQ=255)
               tGCCGCCCACCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCt                                                                                                                       >  2:456643/1‑140 (MQ=255)
                 ccgcccgcCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGa                                                                                                                     <  1:246331/140‑1 (MQ=255)
                 ccgcccgcCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGa                                                                                                                     >  2:1241717/1‑140 (MQ=255)
                 ccgcccgcCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGa                                                                                                                     <  2:1185760/140‑1 (MQ=255)
                  cgcccgccATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGAc                                                                                                                    >  2:431456/1‑140 (MQ=255)
                   gcccgccATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACa                                                                                                                   >  2:1180467/1‑140 (MQ=255)
                     ccgccATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACa                                                                                                                   >  2:548293/1‑138 (MQ=255)
                     ccgccATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACa                                                                                                                   <  1:548293/138‑1 (MQ=255)
                      cgccATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAAcc                                                                                                                <  1:431456/140‑1 (MQ=255)
                      cgccATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAAcc                                                                                                                <  1:1061676/140‑1 (MQ=255)
                         cATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCg                                                                                                             <  1:352701/140‑1 (MQ=255)
                           tCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGAt                                                                                                           <  2:542132/140‑1 (MQ=255)
                           tCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGAt                                                                                                           <  1:578888/140‑1 (MQ=255)
                           tCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGAt                                                                                                           <  2:1165197/140‑1 (MQ=255)
                            ccGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATc                                                                                                          <  1:284457/140‑1 (MQ=255)
                               tCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCaaa                                                                                                       >  1:277121/1‑140 (MQ=255)
                                   ccATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTg                                                                                                   >  2:357138/1‑140 (MQ=255)
                                     aTCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGaa                                                                                                 >  1:880363/1‑140 (MQ=255)
                                     aTCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGaa                                                                                                 >  1:370274/1‑140 (MQ=255)
                                      tCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAg                                                                                                >  2:856671/1‑140 (MQ=255)
                                      tCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAg                                                                                                >  1:148565/1‑140 (MQ=255)
                                      tCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAg                                                                                                <  1:777189/140‑1 (MQ=255)
                                       cGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGa                                                                                               <  1:602638/140‑1 (MQ=255)
                                       cGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGa                                                                                               >  2:335214/1‑140 (MQ=255)
                                        ggCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGAt                                                                                              <  2:911195/140‑1 (MQ=255)
                                              gCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCaa                                                                                        >  2:667053/1‑140 (MQ=255)
                                                   ctctACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGatat                                                                                   <  2:852347/140‑1 (MQ=255)
                                                       aCCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTcgc                                                                               >  1:196709/1‑140 (MQ=255)
                                                         cGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGt                                                                             <  2:902530/140‑1 (MQ=255)
                                                          ggCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTc                                                                            <  1:542343/140‑1 (MQ=255)
                                                          ggCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTc                                                                            <  1:852074/140‑1 (MQ=255)
                                                           gctgctGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCg                                                                           <  1:788845/140‑1 (MQ=255)
                                                            ctgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCgg                                                                          >  2:159349/1‑140 (MQ=255)
                                                            ctgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCgg                                                                          >  2:590612/1‑140 (MQ=255)
                                                            ctgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCgg                                                                          <  1:433900/140‑1 (MQ=255)
                                                            ctgctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCgg                                                                          >  2:322776/1‑140 (MQ=255)
                                                              gctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCg                                                                        <  1:1180467/140‑1 (MQ=255)
                                                              gctgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCg                                                                        <  1:856671/140‑1 (MQ=255)
                                                                tgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGAt                                                                      >  2:1177343/1‑140 (MQ=255)
                                                                tgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGAt                                                                      >  1:138352/1‑140 (MQ=255)
                                                                tgGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGAt                                                                      <  2:573126/140‑1 (MQ=255)
                                                                    cgcATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGa                                                                  <  2:403368/140‑1 (MQ=255)
                                                                    cgcATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGa                                                                  <  1:171514/140‑1 (MQ=255)
                                                                                  aCGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGt                                                    <  1:590612/140‑1 (MQ=255)
                                                                                  aCGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGt                                                    <  1:1241717/140‑1 (MQ=255)
                                                                                                   cGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCcg                                   <  2:138352/140‑1 (MQ=255)
                                                                                                     aTCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTATGCTGGTGACCTGCcgcg                                 >  2:59213/1‑140 (MQ=255)
                                                                                                     aTCTCACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCcgcg                                 <  1:667053/140‑1 (MQ=255)
                                                                                                      tctcACCTTTGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGa                                <  2:148565/140‑1 (MQ=255)
                                                                                                               tGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCa                       >  2:46993/1‑140 (MQ=255)
                                                                                                               tGAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCa                       >  2:1000797/1‑140 (MQ=255)
                                                                                                                gAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTCCCGGACCGGTACGCGGGTGACCTGCCGCGACGTTTGTCAc                      <  2:880363/140‑1 (MQ=255)
                                                                                                                gAAAATCTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCAc                      <  2:370274/140‑1 (MQ=255)
                                                                                                                      cTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGt                >  1:1228343/1‑140 (MQ=255)
                                                                                                                      cTGTCTCACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGt                >  2:211674/1‑140 (MQ=255)
                                                                                                                          ctcACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGa            <  1:211674/140‑1 (MQ=255)
                                                                                                                           tcACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGAt           <  1:46993/140‑1 (MQ=255)
                                                                                                                           tcACACCCGGAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGAt           <  1:517456/140‑1 (MQ=255)
                                                                                                                                   ggAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGa   >  2:450190/1‑140 (MQ=255)
                                                                                                                                    gAGTGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGaa  <  1:734264/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                        
CGTACATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAA  >  NC_000913/3207230‑3207501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A