Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
260 |
73.5 |
2514320 |
99.3% |
2496719 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,160,400 |
C→T |
D131N (GAC→AAC) |
sthA ← |
soluble pyridine nucleotide transhydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,160,400 | 0 | C | T | 98.6%
| 235.6
/ ‑4.8
| 69 | D131N (GAC→AAC) | sthA | soluble pyridine nucleotide transhydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (28/40); total (28/41) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
CGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTCCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCATGGTTA > NC_000913/4160263‑4160530
|
cgGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCg > 2:291467/1‑140 (MQ=255)
ggTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCgg > 2:1222482/1‑140 (MQ=255)
gTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCggg > 1:611922/1‑140 (MQ=255)
cATGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAgcg < 2:1144918/140‑1 (MQ=255)
aTGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAgcgc < 2:913026/140‑1 (MQ=255)
aTGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAgcgc < 1:291467/140‑1 (MQ=255)
gCTGAGAACTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCa > 1:697946/1‑140 (MQ=255)
tGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAAc > 2:278624/1‑140 (MQ=255)
aGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCg > 2:421855/1‑140 (MQ=255)
aGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCg > 1:195399/1‑140 (MQ=255)
cTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTcaac > 2:239979/1‑140 (MQ=255)
cTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTcaac < 2:195399/140‑1 (MQ=255)
tCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACaaa < 2:1207980/140‑1 (MQ=255)
gTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGttt > 1:340724/1‑140 (MQ=255)
gTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGttt < 2:839318/140‑1 (MQ=255)
gTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGttt < 2:165064/140‑1 (MQ=255)
gTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGttt > 1:497913/1‑140 (MQ=255)
tGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTc > 2:143044/1‑140 (MQ=255)
ggATGGGTGAAATCAACATCTGTTGGATGATATGTACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTcc < 1:1155116/140‑1 (MQ=255)
gATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGTGTTTccc > 1:1206934/1‑140 (MQ=255)
aaaTCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGTGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAatat > 2:488060/1‑140 (MQ=255)
cAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTca < 1:1069697/140‑1 (MQ=255)
cAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTca < 1:954039/140‑1 (MQ=255)
aaCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTcac < 2:149902/140‑1 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTccc > 1:419773/1‑126 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTccc < 2:419773/126‑1 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATAttt < 2:961310/136‑1 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATAttt > 1:961310/1‑136 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTcaca < 2:128443/140‑1 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTcaca < 1:296227/140‑1 (MQ=255)
aCATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTcaca < 2:1013044/140‑1 (MQ=255)
cATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAg > 2:616484/1‑140 (MQ=255)
tGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTCCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGAt < 2:1071797/140‑1 (MQ=255)
ttGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTa > 1:1196188/1‑140 (MQ=255)
ggATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACg > 2:582344/1‑140 (MQ=255)
gatgatATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGt < 2:1196188/140‑1 (MQ=255)
tatGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTa > 2:426270/1‑140 (MQ=255)
tGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTaaa > 2:923471/1‑140 (MQ=255)
ggACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTaaaa < 1:418060/140‑1 (MQ=255)
aCGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTaa > 1:859449/1‑136 (MQ=255)
aCGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTaa < 2:859449/136‑1 (MQ=255)
gagCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTg > 2:621091/1‑140 (MQ=255)
agCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGa > 1:619689/1‑140 (MQ=255)
agCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGa > 2:638/1‑140 (MQ=255)
agCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGa > 2:252329/1‑140 (MQ=255)
ccGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACg > 2:542920/1‑140 (MQ=255)
gCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCa < 1:708954/140‑1 (MQ=255)
gCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATgcg < 1:143044/140‑1 (MQ=255)
aTAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGt < 1:239979/140‑1 (MQ=255)
aCAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTttg < 1:454078/140‑1 (MQ=255)
aTTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGa > 2:762581/1‑140 (MQ=255)
tCAGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAAt < 1:582344/140‑1 (MQ=255)
aGCGGTTAGTGTTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCa < 1:519394/140‑1 (MQ=255)
tgtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCgg < 1:1121727/140‑1 (MQ=255)
tgtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCgg < 1:278624/140‑1 (MQ=255)
tgtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCgg < 1:853943/140‑1 (MQ=255)
gtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGc < 2:49065/140‑1 (MQ=255)
gtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGc < 1:542920/140‑1 (MQ=255)
gtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGc < 1:616484/140‑1 (MQ=255)
gtTTCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGc < 1:1222482/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 2:497913/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 2:340724/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 1:488060/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 1:528454/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 1:54177/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 2:697946/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 1:621091/140‑1 (MQ=255)
tttCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCa < 1:710684/140‑1 (MQ=255)
tCAACGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTTCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCATg < 2:611922/140‑1 (MQ=255)
cGCTGCCGTTCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCATGGTTa > 2:1103390/1‑140 (MQ=255)
|
CGGTTCGTGGTGCATGCTGAGAATTGAGTCGCTGTCGTAAATGCGTGGATGGGTGAAATCAACATCTGTTGGATGATATGGACGAGAGCCGCAGGCAATAACAAATTTTTCAGCGGTTAGTGTTTCAACGCTGCCGTCCGGGCAATCCAGCGCCAACGTATGCTCGTCAACAAAGCGAGCGTTTCCCTGCAATATTTCACAGTGATTACGTTCGTAAAATCCCTGACGCATGCGCGTTTGTTGATTAATCACGTTATCGGCATGGTTA > NC_000913/4160263‑4160530
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
