Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A12 F28 I1 R1	227	52.0	1764248	99.3%	1751898	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	92,770	T→C	V453A (GTT→GCT)	ftsI →	peptidoglycan DD‑transpeptidase FtsI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	92,770	0	T	C	100.0%	288.8 / NA	82	V453A (GTT→GCT)	ftsI	peptidoglycan DD‑transpeptidase FtsI
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/41); total (41/41)

ACATAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGTTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAACCGGTA  >  NC_000913/92638‑92901

aCATAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGt                                                                                                                              >  1:788979/1‑140 (MQ=255)

  aTAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCGCTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGa                                                                                                                            <  1:855227/140‑1 (MQ=255)

      agagGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACgt                                                                                                                        >  1:660621/1‑140 (MQ=255)

      agagGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACgt                                                                                                                        >  2:350977/1‑140 (MQ=255)

        agGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACgtgt                                                                                                                      >  2:51223/1‑140 (MQ=255)

        agGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACgtgt                                                                                                                      <  2:366045/140‑1 (MQ=255)

          ggCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCt                                                                                                                    >  2:248920/1‑140 (MQ=255)

          ggCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCt                                                                                                                    >  1:166464/1‑140 (MQ=255)

          ggCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCt                                                                                                                    >  2:458551/1‑140 (MQ=255)

          ggCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCt                                                                                                                    >  2:276991/1‑140 (MQ=255)

          ggCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCt                                                                                                                    >  1:352889/1‑140 (MQ=255)

          ggCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGGGAACGTGTCt                                                                                                                    >  1:488527/1‑140 (MQ=255)

             cACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTcc                                                                                                                 <  1:827227/140‑1 (MQ=255)

                cTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCgg                                                                                                              <  2:233917/140‑1 (MQ=255)

                 ttCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGa                                                                                                             <  1:725306/140‑1 (MQ=255)

                 ttCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGa                                                                                                             <  2:127455/140‑1 (MQ=255)

                  tctcTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGaa                                                                                                            >  2:734037/1‑140 (MQ=255)

                     ctTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATcc                                                                                                         <  2:352889/140‑1 (MQ=255)

                      tttCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCa                                                                                                        <  2:76949/140‑1 (MQ=255)

                       ttCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCAt                                                                                                       <  1:492496/140‑1 (MQ=255)

                         cGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACgtg                                                                                                                       >  1:651493/1‑122 (MQ=255)

                         cGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACgtg                                                                                                                       <  2:651493/122‑1 (MQ=255)

                          ggCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGt                                                                                                    <  1:540644/140‑1 (MQ=255)

                               cGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCa                                                                                               <  1:130366/140‑1 (MQ=255)

                               cGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCa                                                                                               <  1:795364/140‑1 (MQ=255)

                                 ggCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACt                                                                                             <  1:51223/140‑1 (MQ=255)

                                  gCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtg                                                                                            >  1:539379/1‑140 (MQ=255)

                                  gCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtg                                                                                            <  1:232055/140‑1 (MQ=255)

                                  gCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtg                                                                                            <  2:561550/140‑1 (MQ=255)

                                  gCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtg                                                                                            <  2:539379/140‑1 (MQ=255)

                                    tAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtgtg                                                                                          <  1:248920/140‑1 (MQ=255)

                                    tAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtgtg                                                                                          <  2:660621/140‑1 (MQ=255)

                                      aTGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATcc                                                                                                         <  2:210594/123‑1 (MQ=255)

                                      aTGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATcc                                                                                                         >  1:210594/1‑123 (MQ=255)

                                      aTGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTgtggt                                                                                        <  2:453087/140‑1 (MQ=255)

                                      aTGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTgtggt                                                                                        <  2:292710/140‑1 (MQ=255)

                                        ggTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGc                                                                                      <  2:788979/140‑1 (MQ=255)

                                         gTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCa                                                                                     <  1:458551/140‑1 (MQ=255)

                                            acacCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCatat                                                                                  >  2:564045/1‑140 (MQ=255)

                                                cATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATatgatg                                                                              >  1:332128/1‑140 (MQ=255)

                                                cATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATatgatg                                                                              >  2:238523/1‑140 (MQ=255)

                                                 aTTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCa                                                                                               >  2:534024/1‑122 (MQ=255)

                                                 aTTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCa                                                                                               <  1:534024/122‑1 (MQ=255)

                                                 aTTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATgg                                                                             >  2:269197/1‑140 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtg                                                                                            <  1:388021/124‑1 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACtg                                                                                            >  2:388021/1‑124 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGa                                                                            >  2:254713/1‑140 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGa                                                                            >  2:36116/1‑140 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGa                                                                            >  1:392398/1‑140 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGa                                                                            >  1:420948/1‑140 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGa                                                                            >  1:2743/1‑140 (MQ=255)

                                                  ttACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGa                                                                            >  1:769380/1‑140 (MQ=255)

                                                       gTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCg                                                                       <  1:734037/140‑1 (MQ=255)

                                                          aGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGt                                                                      >  2:199145/1‑138 (MQ=255)

                                                          aGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGt                                                                      <  1:199145/138‑1 (MQ=255)

                                                          aGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTgg                                                                    <  2:2743/140‑1 (MQ=255)

                                                          aGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTgg                                                                    <  1:350977/140‑1 (MQ=255)

                                                            cgcgAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGgcg                                                                  >  2:253913/1‑140 (MQ=255)

                                                            cgcgAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGgcg                                                                  >  1:703999/1‑140 (MQ=255)

                                                            cgcgAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGgcg                                                                  >  2:420557/1‑140 (MQ=255)

                                                                      cGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcg                                                        >  1:39362/1‑140 (MQ=255)

                                                                          aCTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcgg                                                    <  2:392398/140‑1 (MQ=255)

                                                                          aCTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcgg                                                    <  2:39362/140‑1 (MQ=255)

                                                                           cTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggc                                                   >  2:309803/1‑140 (MQ=255)

                                                                           cTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggc                                                   >  1:301256/1‑140 (MQ=255)

                                                                            tATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggcg                                                  >  2:649402/1‑140 (MQ=255)

                                                                              tCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggc                                                         <  2:190278/131‑1 (MQ=255)

                                                                              tCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggc                                                         >  1:190278/1‑131 (MQ=255)

                                                                                        cGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAggcgg                                      <  2:703999/140‑1 (MQ=255)

                                                                                           cATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGa                                   <  1:403574/140‑1 (MQ=255)

                                                                                             tttATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGAtt                                 <  2:828266/140‑1 (MQ=255)

                                                                                               tATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTaa                               <  2:152533/140‑1 (MQ=255)

                                                                                               tATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTaa                               >  1:638300/1‑140 (MQ=255)

                                                                                                      cACTGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtat                        >  1:762480/1‑140 (MQ=255)

                                                                                                         tGTCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatcgt                     >  1:40434/1‑140 (MQ=255)

                                                                                                           tCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAgg                            <  2:133919/131‑1 (MQ=255)

                                                                                                           tCGATTACCAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAgg                            >  1:133919/1‑131 (MQ=255)

                                                                                                                  ccAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCAtt            <  2:40434/140‑1 (MQ=255)

                                                                                                                  ccAAAGTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCAtt            <  1:309803/140‑1 (MQ=255)

                                                                                                                       gTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCAtt            >  2:268814/1‑135 (MQ=255)

                                                                                                                       gTTGACCCCCCGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCAtt            <  1:268814/135‑1 (MQ=255)

                                                                                                                            ccccccGGCTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAACCGGTa  >  1:830898/1‑140 (MQ=255)

ACATAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGTTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAACCGGTA  >  NC_000913/92638‑92901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A