Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A12 F28 I1 R1 227 52.0 1764248 99.3% 1751898 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,336,441 G→A S68S (AGC→AGT)  yfaA ← DUF2138 domain‑containing protein YfaA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,336,4410GA100.0% 242.2 / NA 69S68S (AGC→AGT) yfaADUF2138 domain‑containing protein YfaA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (32/37);  total (32/37)

TGTTCATAGACAATACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGGCTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGA  >  NC_000913/2336310‑2336572
                                                                                                                                   |                                                                                                                                   
tgtTCATAGACAATACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCagaga                                                                                                                             >  1:775323/1‑140 (MQ=255)
    cATAGACAATACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCg                                                                                                                         <  1:412759/140‑1 (MQ=255)
     aTAGACAATACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGc                                                                                                                        <  2:239529/140‑1 (MQ=255)
           aaTACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCga                                                                                                                  >  1:13648/1‑140 (MQ=255)
            aTACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCgag                                                                                                                 >  1:230971/1‑140 (MQ=255)
            aTACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCgag                                                                                                                 >  1:102620/1‑140 (MQ=255)
             tACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCgaga                                                                                                                >  2:52521/1‑140 (MQ=255)
               cgacgaATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGaaa                                                                                                              >  2:530875/1‑140 (MQ=255)
                gacgaATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGGAag                                                                                                             >  1:70635/1‑140 (MQ=255)
                    aaTGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGt                                                                                                         <  1:563047/140‑1 (MQ=255)
                    aaTGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGt                                                                                                         <  2:775323/140‑1 (MQ=255)
                    aaTGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGt                                                                                                         <  1:708011/140‑1 (MQ=255)
                     aTGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTc                                                                                                        >  2:526944/1‑140 (MQ=255)
                               cAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTg                                                                                              >  2:856619/1‑140 (MQ=255)
                                  tGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTgaga                                                                                           <  2:102620/140‑1 (MQ=255)
                                   gCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGGAAGAGGTCCGGCTCATTGAGAt                                                                                          <  2:70635/140‑1 (MQ=255)
                                     ccAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGt                                                                                                         <  2:173632/123‑1 (MQ=255)
                                     ccAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGt                                                                                                         >  1:173632/1‑123 (MQ=255)
                                     ccAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCg                                                                                        >  1:668493/1‑140 (MQ=255)
                                       aGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGAt                                                                                      <  2:501375/140‑1 (MQ=255)
                                         aCGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGAttt                                                                                    >  2:32608/1‑140 (MQ=255)
                                         aCGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGAttt                                                                                    <  1:856619/140‑1 (MQ=255)
                                            aTCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCa                                                                                 >  2:69121/1‑140 (MQ=255)
                                                  aTGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGAttgt                                                                           <  2:13648/140‑1 (MQ=255)
                                                         tGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcac                                                                    >  2:137228/1‑140 (MQ=255)
                                                           ataataGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcacca                                                                  <  1:530875/140‑1 (MQ=255)
                                                           ataataGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcacca                                                                  >  1:168274/1‑140 (MQ=255)
                                                           ataataGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcacca                                                                  >  2:111459/1‑140 (MQ=255)
                                                           ataataGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcacca                                                                  >  1:521748/1‑140 (MQ=255)
                                                                aGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAgc                                                             >  1:483511/1‑140 (MQ=255)
                                                                aGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAgc                                                             >  1:638914/1‑140 (MQ=255)
                                                                   aaaCGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcacca                                                                  <  2:456836/132‑1 (MQ=255)
                                                                   aaaCGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGcacca                                                                  >  1:456836/1‑132 (MQ=255)
                                                                                 cTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTc                                            <  1:52521/140‑1 (MQ=255)
                                                                                  tCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCt                                           <  2:230971/140‑1 (MQ=255)
                                                                                      aaCATCGTTGAGAAACGGAATGGGGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGcc                                       >  2:407106/1‑140 (MQ=255)
                                                                                      aaCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGAc                                                       <  1:491446/124‑1 (MQ=255)
                                                                                      aaCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGAc                                                       >  2:491446/1‑124 (MQ=255)
                                                                                      aaCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGcc                                       <  1:83290/140‑1 (MQ=255)
                                                                                      aaCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGcc                                       <  2:205224/140‑1 (MQ=255)
                                                                                      aaCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGcc                                       <  2:486639/140‑1 (MQ=255)
                                                                                       aCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGccc                                      <  1:32608/140‑1 (MQ=255)
                                                                                       aCATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGccc                                      <  1:137228/140‑1 (MQ=255)
                                                                                         aTCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCAc                                    <  1:293978/140‑1 (MQ=255)
                                                                                            gTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGc                                 <  2:638914/140‑1 (MQ=255)
                                                                                            gTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGc                                 <  2:668493/140‑1 (MQ=255)
                                                                                            gTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGc                                 >  2:405916/1‑140 (MQ=255)
                                                                                              ggAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCa                               <  2:168274/140‑1 (MQ=255)
                                                                                                agaAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGcc                                       >  1:257796/1‑130 (MQ=255)
                                                                                                agaAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGcc                                       <  2:257796/130‑1 (MQ=255)
                                                                                                agaAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGc                                 <  2:580490/136‑1 (MQ=255)
                                                                                                agaAACGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGc                                 >  1:580490/1‑136 (MQ=255)
                                                                                                     cGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGccc                                      >  2:723673/1‑126 (MQ=255)
                                                                                                     cGGAATGGTGAGGAGATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGccc                                      <  1:723673/126‑1 (MQ=255)
                                                                                                              gaggagATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGccc               >  2:698713/1‑140 (MQ=255)
                                                                                                              gaggagATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGccc               >  1:553096/1‑140 (MQ=255)
                                                                                                               aggagATCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCa              <  2:553096/140‑1 (MQ=255)
                                                                                                                  agaTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCa                     <  2:508518/130‑1 (MQ=255)
                                                                                                                  agaTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCa                     >  1:508518/1‑130 (MQ=255)
                                                                                                                    aTCTTTGGGAAGCTGACTTAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCACACTGCCAGCATATTGCAACGCTCAGACGc         <  2:380000/140‑1 (MQ=255)
                                                                                                                    aTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGc         <  1:111459/140‑1 (MQ=255)
                                                                                                                    aTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGc         <  1:292970/140‑1 (MQ=255)
                                                                                                                    aTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGc         >  1:297734/1‑140 (MQ=255)
                                                                                                                    aTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGc         >  2:292970/1‑140 (MQ=255)
                                                                                                                    aTCTTTGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGc         <  1:405916/140‑1 (MQ=255)
                                                                                                                       tttGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAg      >  1:384366/1‑140 (MQ=255)
                                                                                                                         tGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCg    <  1:407106/140‑1 (MQ=255)
                                                                                                                         tGGGAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCg    <  1:698713/140‑1 (MQ=255)
                                                                                                                           ggAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGa  <  2:734672/140‑1 (MQ=255)
                                                                                                                           ggAAGCTGACTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGa  <  1:526944/140‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                   
TGTTCATAGACAATACGACGAATGCTGCCTTCAATGCCCAGACGATCGGCATGATTCTGATAATAGAAAACGAAATCTTCGCTCAGAACATCGTGGAGAAACGGAATGGTGAGGAGATCTTTGGGAAGCTGGCTCAGAGAGTCGCTGTCGAGAAAGAGGTCCGGCTCATTGAGATCGATTTGCAGATTGTTGTGCACCACCAGCGGCGACAACGTTTTTTCTGGCCCACTGCCAGCATATTGCAACGCCCAGACGCCAGCGGA  >  NC_000913/2336310‑2336572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A