Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F73 I1 R1 33 77.0 2636344 99.1% 2612616 139.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,585,353 G→T A470E (GCG→GAG)  hsdR ← type I restriction enzyme EcoKI endonuclease component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,585,3530GT100.0% 207.2 / NA 59A470E (GCG→GAG) hsdRtype I restriction enzyme EcoKI endonuclease component
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (24/35);  total (24/35)

CAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTGCGGTTCGC  >  NC_000913/4585219‑4585488
                                                                                                                                      |                                                                                                                                       
cAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagc                                                                                                                                    <  2:981210/140‑1 (MQ=255)
cAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagc                                                                                                                                    <  2:602313/140‑1 (MQ=255)
 aaaCGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagca                                                                                                                                   <  2:1144288/140‑1 (MQ=255)
     gcgcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTGAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGAt                                                                                                                               >  1:480625/1‑140 (MQ=255)
     gcgcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGAt                                                                                                                               <  2:118962/140‑1 (MQ=255)
       gcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagc                                                                                                                                    >  2:274444/1‑133 (MQ=255)
       gcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagc                                                                                                                                    <  1:274444/133‑1 (MQ=255)
       gcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGAtct                                                                                                                             <  2:1065508/140‑1 (MQ=255)
        cccAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagca                                                                                                                                   <  2:665397/133‑1 (MQ=255)
        cccAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCcagca                                                                                                                                   >  1:665397/1‑133 (MQ=255)
           aGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCttg                                                                                                                         <  1:981940/140‑1 (MQ=255)
           aGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCttg                                                                                                                         <  1:905496/140‑1 (MQ=255)
                   ttCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCt                                                                                                                 >  1:662788/1‑140 (MQ=255)
                   ttCGCCAAGAGAACGGCGGCCGACAAGGTAGGGAATGCGGTTTAAACGCTGGGCCGGGGTTGGGCGGGACCACATGGCGATTGACCGGCGGGTTTTACCCGCACCGGTCGCCCACTCCCGGAGGAAATCTTTTTGccccc                                                                                                                 >  2:253224/1‑139 (MQ=255)
                      gCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGa                                                                                                              <  1:1265411/140‑1 (MQ=255)
                        cAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACg                                                                                                            >  1:903782/1‑140 (MQ=255)
                           gagaACGGCGGTCGACAAGGAAGAGAATGCGTTTGAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGAtt                                                                                                         <  2:480625/140‑1 (MQ=255)
                            agaACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTg                                                                                                        >  1:13763/1‑140 (MQ=255)
                                      tCGACAAGGGAGAGAATGCGTTTAAAACGCTGGGACTGGAACAGGCGGGACATCATGGCGATTGCCGTACGGGATTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAAc                                                                                              >  2:97824/1‑140 (MQ=255)
                                       cGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTTCCCCTTGACGATTGCCTTTTCAAcc                                                                                             >  2:1040264/1‑140 (MQ=255)
                                          cAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACcgcg                                                                                          <  1:398942/140‑1 (MQ=255)
                                              gAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGa                                                                                      <  2:13763/140‑1 (MQ=255)
                                                agagAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACg                                                                                    >  1:499559/1‑140 (MQ=255)
                                                  agaATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGc                                                                                  <  1:911469/140‑1 (MQ=255)
                                                     aTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTTACGATTGCCTTTTCAACCGCGCGGACGGCATc                                                                               <  2:973427/140‑1 (MQ=255)
                                                     aTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc                                                                               <  2:689968/140‑1 (MQ=255)
                                                     aTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc                                                                               <  1:1081849/140‑1 (MQ=255)
                                                      tGCGTTTAAAACGCTGGGACTGGATCAGACGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCt                                                                              >  2:343750/1‑140 (MQ=255)
                                                          tttAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCt                                                                          <  1:787779/140‑1 (MQ=255)
                                                          cttAAAACACTGGGACTGGATCAGGCGGCACATCATGGCGATCGCCGTACGGGGTTGACCGGTACCGGACACCGACTTCAGCAGGAACTCTTGATGCACCTTGACGATTGCCTTTTCAACCGCCCGGACGGCATCTTccg                                                                          >  2:415971/2‑139 (MQ=255)
                                                                  gCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGAtaataa                                                                  >  1:892974/1‑140 (MQ=255)
                                                                   cTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAAc                                                                 >  1:746059/1‑140 (MQ=255)
                                                                        aCTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAgg                                                            <  2:920442/140‑1 (MQ=255)
                                                                            gATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCa                                                        >  1:885255/1‑140 (MQ=255)
                                                                            gATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCa                                                        >  1:534192/1‑140 (MQ=255)
                                                                            gATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCa                                                        >  2:436524/1‑140 (MQ=255)
                                                                              tCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgc                                                      <  1:109464/140‑1 (MQ=255)
                                                                              tCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgc                                                      <  1:788747/140‑1 (MQ=255)
                                                                                 ggCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcg                                                   >  1:244368/1‑140 (MQ=255)
                                                                                 ggCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcg                                                   >  2:337721/1‑140 (MQ=255)
                                                                                   cGGCACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct                                                 <  2:304246/140‑1 (MQ=255)
                                                                                   cGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct                                                 <  2:316195/140‑1 (MQ=255)
                                                                                   cGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct                                                 <  1:343750/140‑1 (MQ=255)
                                                                                   cGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct                                                 <  1:379579/140‑1 (MQ=255)
                                                                                     gAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCa                                               <  2:578241/140‑1 (MQ=255)
                                                                                      aaCATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCAt                                              >  1:864186/1‑140 (MQ=255)
                                                                                        catcatGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGc                                            <  2:585669/140‑1 (MQ=255)
                                                                                          tcatGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCa                                          <  2:864186/140‑1 (MQ=255)
                                                                                                  aTTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATc                                  >  2:298236/1‑140 (MQ=255)
                                                                                                    tGCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCgg                                >  2:720487/1‑140 (MQ=255)
                                                                                                     gCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGTTCGCTCATGCCAGGGTTATCGGc                               >  1:817818/1‑140 (MQ=255)
                                                                                                     gCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGc                               <  2:903782/140‑1 (MQ=255)
                                                                                                     gCCGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGAGCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGc                               >  2:1122980/1‑140 (MQ=255)
                                                                                                      ccGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCa                              <  2:885255/140‑1 (MQ=255)
                                                                                                       cGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCaa                             <  2:428097/140‑1 (MQ=255)
                                                                                                       cGTACGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCaa                             <  2:785764/140‑1 (MQ=255)
                                                                                                           cGGGTTTTACCGGTACCGGTCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCa                         <  2:1193742/140‑1 (MQ=255)
                                                                                                                      ggtaccggtCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGtt              <  2:1312774/140‑1 (MQ=255)
                                                                                                                        taccggtCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGtttt            >  2:581912/1‑140 (MQ=255)
                                                                                                                        taccggtCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGtttt            >  2:1197474/1‑140 (MQ=255)
                                                                                                                        taccggtCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGtttt            >  2:362987/1‑140 (MQ=255)
                                                                                                                          ccggtCGCCATCTCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTg          <  1:337721/140‑1 (MQ=255)
                                                                                                                                 ccatctccaGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTGCGGTTCg   <  1:1197474/140‑1 (MQ=255)
                                                                                                                                  catctccaGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTGCGGTTCGc  >  1:210298/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                       
CAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATCGGCAAACCACTGATTCTGTTTTTGCGGTTCGC  >  NC_000913/4585219‑4585488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A