Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F28 I1 R1	124	90.1	3003320	99.2%	2979293	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,948,292	A→G	V114A (GTT→GCT)	nudB ←	dihydroneopterin triphosphate diphosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,948,292	0	A	G	100.0%	241.4 / NA	64	V114A (GTT→GCT)	nudB	dihydroneopterin triphosphate diphosphatase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (32/32); total (32/32)

ATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAACGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAATTAAGGT  >  NC_000913/1948158‑1948422

atCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATc                                                                                                                               >  1:394314/1‑140 (MQ=255)

        aTAGCCCTGCCTGTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTc                                                                                                                       >  2:1231557/1‑140 (MQ=255)

          aGCCCTGCCTGTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGt                                                                                                                     >  1:1464666/1‑140 (MQ=255)

                gcctgTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGaa                                                                                                               >  2:20883/1‑140 (MQ=255)

                   tgTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAgcg                                                                                                            <  1:919556/140‑1 (MQ=255)

                   tgTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAgcg                                                                                                            <  2:1131468/140‑1 (MQ=255)

                   tgTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAgcg                                                                                                            <  1:511687/140‑1 (MQ=255)

                     ttCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCa                                                                                                          >  1:713874/1‑140 (MQ=255)

                     ttCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCa                                                                                                          >  2:194294/1‑140 (MQ=255)

                      tCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCaa                                                                                                         >  2:1165807/1‑140 (MQ=255)

                        aGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGa                                                                                                       <  1:622304/140‑1 (MQ=255)

                         ggCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGAc                                                                                                      >  2:1196569/1‑140 (MQ=255)

                         ggCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGAc                                                                                                      >  1:488796/1‑140 (MQ=255)

                         ggCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGAc                                                                                                      <  1:1260926/140‑1 (MQ=255)

                          gCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACa                                                                                                     >  2:143502/1‑140 (MQ=255)

                           cAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAg                                                                                                    <  1:512172/140‑1 (MQ=255)

                              cGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAAc                                                                                                 <  1:459802/140‑1 (MQ=255)

                                ttAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCa                                                                                               <  2:394314/140‑1 (MQ=255)

                                  aaTTACAAACTGTTCAATCGCCTGTCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATg                                                                                             <  2:922043/140‑1 (MQ=255)

                                   aTTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGa                                                                                            <  2:1268416/140‑1 (MQ=255)

                                    ttACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGAt                                                                                           <  1:1215553/140‑1 (MQ=255)

                                     tACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGAtt                                                                                          <  1:371694/140‑1 (MQ=255)

                                      aCAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTc                                                                                         <  1:1390606/140‑1 (MQ=255)

                                        aaaCTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCg                                                                                       >  1:190041/1‑140 (MQ=255)

                                        aaaCTGTTCAATCGCCTGCCGGCTGGTCCAGGACTTATTGAACGCCGCCGCAGCAGGCGCATCAAGCCACTTGCAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCg                                                                                       >  2:564156/1‑140 (MQ=255)

                                              ttCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTAc                                                                                 >  1:807504/1‑140 (MQ=255)

                                              ttCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTAc                                                                                 >  2:1217852/1‑140 (MQ=255)

                                              ttCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTAc                                                                                 >  2:1198713/1‑140 (MQ=255)

                                              ttCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTAc                                                                                 >  1:768531/1‑140 (MQ=255)

                                              ttCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTAc                                                                                 >  2:991177/1‑140 (MQ=255)

                                                   tCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTc                                                                            >  2:1363987/1‑140 (MQ=255)

                                                      ccTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACg                                                                         >  2:1334068/1‑140 (MQ=255)

                                                        tGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGcc                                                                       >  1:1039144/1‑140 (MQ=255)

                                                        tGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGcc                                                                       >  2:1034034/1‑140 (MQ=255)

                                                        tGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGAAGGCGCATCAAGCCTCTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGcc                                                                       <  1:736944/140‑1 (MQ=255)

                                                               tGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCa                                                                <  2:488796/140‑1 (MQ=255)

                                                                   ccAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGc                                                            <  2:683260/140‑1 (MQ=255)

                                                                     aGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGa                                                          <  1:518260/140‑1 (MQ=255)

                                                                     aGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGa                                                          <  1:20883/140‑1 (MQ=255)

                                                                            aGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTa                                                   >  1:595830/1‑140 (MQ=255)

                                                                            aGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTa                                                   >  1:831305/1‑140 (MQ=255)

                                                                            aGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTa                                                   >  2:1049955/1‑140 (MQ=255)

                                                                            aGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTa                                                   >  1:1235874/1‑140 (MQ=255)

                                                                            aGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTa                                                   >  1:519502/1‑140 (MQ=255)

                                                                            aGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTa                                                   >  2:874183/1‑140 (MQ=255)

                                                                                  cgccgccgcAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAAtgtg                                             >  1:416048/1‑140 (MQ=255)

                                                                                          cagcagGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAAtt                                     >  1:307311/1‑140 (MQ=255)

                                                                                            gcagGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTc                                   <  2:190041/140‑1 (MQ=255)

                                                                                                 cgcATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAAct                              <  1:1454862/140‑1 (MQ=255)

                                                                                                     tCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTAc                          <  1:656995/140‑1 (MQ=255)

                                                                                                     tCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTAc                          <  1:174166/140‑1 (MQ=255)

                                                                                                       aaGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCg                        >  2:1280346/1‑140 (MQ=255)

                                                                                                        aGCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGt                       <  1:1363987/140‑1 (MQ=255)

                                                                                                         gCCACTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTg                      <  1:623033/140‑1 (MQ=255)

                                                                                                             cTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCt                  <  1:527717/140‑1 (MQ=255)

                                                                                                             cTTGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAACGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCt                  <  2:291051/140‑1 (MQ=255)

                                                                                                              ttGTAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTg                 >  1:370687/1‑140 (MQ=255)

                                                                                                                 tAAGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACa              >  1:1008604/1‑140 (MQ=255)

                                                                                                                  aaGCCAGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAg             <  1:309763/140‑1 (MQ=255)

                                                                                                                       aGATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAAt        <  2:595830/140‑1 (MQ=255)

                                                                                                                        gATGTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAAtt       <  1:1334068/140‑1 (MQ=255)

                                                                                                                           gTTCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAATTAAg    >  2:1306447/1‑140 (MQ=255)

                                                                                                                             tCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAATTAAGGt  <  2:1464666/140‑1 (MQ=255)

                                                                                                                             tCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAATTAAGGt  <  2:768531/140‑1 (MQ=255)

                                                                                                                             tCAGTGAAAGCGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAATTAAGGt  <  2:1013763/140‑1 (MQ=255)

ATCTCCAGATAGCCCTGCCTGTTCAGGCAGCGTTAATTACAAACTGTTCAATCGCCTGCCGGTTGCTCCAGGACTTAGTGAGCGCCGCCGCAGCAGGCGCATCAAGCCACTTGTAAGCCAGATGTTCAGTGAAAACGATCTGCCGCTCGTGCGGAAGCGCAAGACAGAACCATGATTCCGTATTACGCGTCACGCCCGGCGCATAGCGATGACGTAAATGTGAAAAAATTTCAAACTCTACCGTGCGCTGACAGTCAATTAAGGT  >  NC_000913/1948158‑1948422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A