Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F28 I1 R1 132 61.4 2079690 99.1% 2060972 139.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 677,922 A→G T170A (ACC→GCC)  djlB → putative chaperone

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913677,9220AG100.0% 236.1 / NA 63T170A (ACC→GCC) djlBputative chaperone
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (32/31);  total (32/31)

TCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATG  >  NC_000913/677794‑678057
                                                                                                                                |                                                                                                                                       
tCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCAt                                                                                                                              >  2:663372/1‑140 (MQ=255)
tCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCAt                                                                                                                              >  2:167557/1‑140 (MQ=255)
tCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCAt                                                                                                                              <  1:804864/140‑1 (MQ=255)
       cGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTTCATCCGCCCg                                                                                                                       <  1:106113/140‑1 (MQ=255)
       cGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCg                                                                                                                       <  1:171675/140‑1 (MQ=255)
          ggtgTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTg                                                                                                                    <  1:456820/140‑1 (MQ=255)
              ttattaGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGt                                                                                                                >  2:473981/1‑140 (MQ=255)
                   aGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCaaa                                                                                                           >  1:408180/1‑140 (MQ=255)
                      aGAAAGATTGCGGTGGTTACCGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATg                                                                                                        <  1:651329/140‑1 (MQ=255)
                      aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATg                                                                                                        >  1:712326/1‑140 (MQ=255)
                      aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATg                                                                                                        >  1:26905/1‑140 (MQ=255)
                      aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATg                                                                                                        >  1:406486/1‑140 (MQ=255)
                      aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATg                                                                                                        >  2:331014/1‑140 (MQ=255)
                      aGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATg                                                                                                        >  1:390511/1‑140 (MQ=255)
                           gATTGCGGTGGTTACAGGAGGAAAAGACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACAcc                                                                                                   >  2:388253/1‑140 (MQ=255)
                             ttGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCAt                                                                                                 <  1:592524/140‑1 (MQ=255)
                              tGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATc                                                                                                >  1:246947/1‑140 (MQ=255)
                                  gtggtTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATAACACCATCGAtt                                                                                            >  2:790473/1‑140 (MQ=255)
                                       tACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTAc                                                                                       <  2:509790/140‑1 (MQ=255)
                                        aCAGGAGGAAAATACCGGGGAAATAGACGAAGAATAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTAcc                                                                                      <  2:631455/140‑1 (MQ=255)
                                               gaAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGtt                                                                               >  1:899110/1‑140 (MQ=255)
                                                    tACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTc                                                                          >  2:569190/1‑140 (MQ=255)
                                                    tACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTc                                                                          >  2:706650/1‑140 (MQ=255)
                                                      ccGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCgg                                                                        >  2:159326/1‑140 (MQ=255)
                                                         gggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGAtt                                                                     >  1:260074/1‑140 (MQ=255)
                                                         gggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGAtt                                                                     <  2:155748/140‑1 (MQ=255)
                                                          ggAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGAttt                                                                    >  1:953104/1‑140 (MQ=255)
                                                              aTAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTc                                                                <  1:167557/140‑1 (MQ=255)
                                                              aTAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTc                                                                <  2:300987/140‑1 (MQ=255)
                                                                aGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCAt                                                              <  1:473981/140‑1 (MQ=255)
                                                                aGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCAt                                                              <  1:110567/140‑1 (MQ=255)
                                                                 gACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATc                                                             <  1:406331/140‑1 (MQ=255)
                                                                          gaaCTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCcaca                                                    <  1:563791/140‑1 (MQ=255)
                                                                            aCTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAAt                                                  <  2:406486/140‑1 (MQ=255)
                                                                               ggAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGc                                               <  1:575909/140‑1 (MQ=255)
                                                                                gAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCt                                              >  2:851799/1‑140 (MQ=255)
                                                                                 aaTCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTg                                             <  1:569190/140‑1 (MQ=255)
                                                                                 aaTCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTg                                             <  2:880981/140‑1 (MQ=255)
                                                                                 aaTCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTg                                             <  2:390511/140‑1 (MQ=255)
                                                                                 aaTCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTg                                             <  2:953104/140‑1 (MQ=255)
                                                                                  aTCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGa                                            >  1:889151/1‑140 (MQ=255)
                                                                                     cTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACAt                                         >  1:346621/1‑140 (MQ=255)
                                                                                     cTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACAt                                         >  1:204378/1‑140 (MQ=255)
                                                                                              tGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAg                                <  1:243697/140‑1 (MQ=255)
                                                                                               gCCATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAgc                               >  1:398537/1‑140 (MQ=255)
                                                                                                ccATTGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAgcg                              >  2:394379/1‑140 (MQ=255)
                                                                                                   ttGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCaa                           <  1:848020/140‑1 (MQ=255)
                                                                                                    tGCGAAGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAAc                          >  2:108127/1‑140 (MQ=255)
                                                                                                      cGAAGGGGAATGTTTTTAACTTCCAGGCAATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACAt                        >  1:924090/1‑140 (MQ=255)
                                                                                                        aaGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcg                      <  2:26905/140‑1 (MQ=255)
                                                                                                        aaGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcg                      >  1:498305/1‑140 (MQ=255)
                                                                                                        aaGGGGAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCATGCAAAATGACGCCCTCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGGCATTGTATTTAGCGCAACATcg                      <  2:951851/140‑1 (MQ=255)
                                                                                                          ggggAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcgcg                    <  2:260074/140‑1 (MQ=255)
                                                                                                          ggggAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcgcg                    >  1:326932/1‑140 (MQ=255)
                                                                                                            ggAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa                  <  1:939851/140‑1 (MQ=255)
                                                                                                            ggAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa                  <  1:824115/140‑1 (MQ=255)
                                                                                                             gAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAg                 >  2:810858/1‑140 (MQ=255)
                                                                                                             gAATGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAg                 >  2:147302/1‑140 (MQ=255)
                                                                                                                tGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGa              >  1:707631/1‑140 (MQ=255)
                                                                                                                tGTTTTTAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTCTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGa              <  2:412466/140‑1 (MQ=255)
                                                                                                                     ttAACTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATc         >  1:1020568/1‑140 (MQ=255)
                                                                                                                       aaCTTCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATccc       <  1:824371/140‑1 (MQ=255)
                                                                                                                          ttCCAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCga    <  2:712326/140‑1 (MQ=255)
                                                                                                                            ccAGGCCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCgatg  >  2:638843/1‑140 (MQ=255)
                                                                                                                                |                                                                                                                                       
TCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATG  >  NC_000913/677794‑678057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A