Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F28 I1 R1	162	93.0	3098984	99.0%	3067994	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	679,481	IS5 (–) +4 bp	intergenic (‑75/‑24)	ybeT ← / → ybeU	Sel1 repeat‑containing protein YbeT/DUF1266 domain‑containing protein YbeU

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275149	NA (NA)	100 (1.090)	55/278	0.3	100%	noncoding (1/1195 nt)	IS5	repeat region
*	?	NC_000913	679481 =	0 (0.000)	100 (1.090)	55/278	0.3	100%	intergenic (‑75/‑27)	ybeT/ybeU	Sel1 repeat‑containing protein YbeT/DUF1266 domain‑containing protein YbeU
*	?	NC_000913	= 679484	0 (0.000)	58 (0.630)	33/278	1.5	100%	intergenic (‑78/‑24)	ybeT/ybeU	Sel1 repeat‑containing protein YbeT/DUF1266 domain‑containing protein YbeU
*	?	NC_000913	687851 =	NA (NA)	58 (0.630)	33/278	1.5	100%	noncoding (1195/1195 nt)	IS5	repeat region

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/275011‑275149

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAAA  >  NC_000913/679481‑679618

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  2:678540/140‑1

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  2:837410/140‑1

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  1:716668/140‑1

 AAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                          <  1:826824/140‑1

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  2:251446/140‑1

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  2:362352/140‑1

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  1:779718/140‑1

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  1:811685/140‑1

  AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  2:309284/140‑1

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAGATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT                                                                                                                                       >  2:1229635/1‑140

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT                                                                                                                                       <  2:291160/140‑1

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT                                                                                                                                       <  1:40984/140‑1

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT                                                                                                                                       <  1:198232/140‑1

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT                                                                                                                                       <  1:1229787/140‑1

    TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT                                                                                                                                       <  1:1233933/140‑1

     CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATG                                                                                                                                      <  1:983578/140‑1

     CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATG                                                                                                                                      <  1:1193732/140‑1

     CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATG                                                                                                                                      <  2:114434/140‑1

     CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATG                                                                                                                                      <  1:784783/140‑1

     CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATG                                                                                                                                      <  1:1387151/140‑1

      TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGC                                                                                                                                     <  2:1328142/140‑1

      TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGC                                                                                                                                     <  1:1387838/140‑1

         TTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACT                                                                                                                                  >  1:955234/1‑140

           TCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTA                                                                                                                                <  2:1073988/140‑1

             TGGTCTGACGGCGCTTACTGCTGAATTCTCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGCCTTGTTCGCACCTTCCTTAATGCCCTTAAG                                                                                                                              <  2:1185704/140‑1

             TGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAG                                                                                                                              <  1:70327/140‑1

              GGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGG                                                                                                                             >  2:1123579/1‑140

                TCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGA                                                                                                                           <  1:39823/140‑1

                     CGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATT                                                                                                                      <  1:664639/140‑1

                     CGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATT                                                                                                                      <  2:367951/140‑1

                       GCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAA                                                                                                                    <  2:787756/140‑1

                         GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACA                                                                                                                  >  1:152645/1‑140

                          CTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAA                                                                                                                 <  2:443514/140‑1

                          CTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAA                                                                                                                 <  1:1485959/140‑1

                          CTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACAGGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAA                                                                                                                 <  1:799388/140‑1

                              CTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGA                                                                                                             >  2:955411/1‑140

                               TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAA                                                                                                            <  2:1303917/140‑1

                                 CTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATA                                                                                                          <  1:964984/140‑1

                                         ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAA                                                                                                  >  2:899136/1‑140

                                           TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACA                                                                                                <  1:692065/140‑1

                                            GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAA                                                                                               >  1:560118/1‑140

                                              CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATA                                                                                             >  1:1547995/1‑140

                                                GCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATC                                                                                           >  1:1204229/1‑140

                                                         AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTG                                                                                  >  2:155365/1‑140

                                                         AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTG                                                                                  >  1:519137/1‑140

                                                              ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTT                                                                             >  1:944833/1‑140

                                                                GACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTC                                                                           <  1:539429/140‑1

                                                                GACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTC                                                                           >  1:1385884/1‑140

                                                                  CTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTG                                                                         <  1:1257464/140‑1

                                                                   TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGC                                                                        <  1:1267213/140‑1

                                                                     ATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGC                                                                      >  2:1513717/1‑140

                                                                            ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGA                                                               <  1:1123579/140‑1

                                                                            ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGA                                                               <  2:99820/140‑1

                                                                                TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATA                                                           >  2:484464/1‑140

                                                                                     TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAA                                                      <  1:899136/140‑1

                                                                                       TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATACGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATC                                                    >  2:276013/1‑140

                                                                                       TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATC                                                    >  2:442089/1‑140

                                                                                       TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATC                                                    >  1:292529/1‑140

                                                                                        GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCA                                                   >  1:876075/1‑140

                                                                                          CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGG                                                 >  2:253923/1‑140

                                                                                          CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGG                                                 >  2:1358337/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGTACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGT                                               >  2:582257/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGT                                               >  1:1402075/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGT                                               >  2:857599/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGT                                               >  1:1398030/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGT                                               >  2:319752/1‑140

                                                                                            CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGT                                               >  2:415458/1‑140

                                                                                                ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCA                                           <  1:430026/140‑1

                                                                                                    CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACC                                       >  2:1087645/1‑140

                                                                                                     AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCC                                      >  1:385404/1‑140

                                                                                                     AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCC                                      >  1:234058/1‑140

                                                                                                       ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGC                                    <  2:1539466/140‑1

                                                                                                          tgagaTCATGTCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCA                                 >  2:1517735/6‑140

                                                                                                             TCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGA                              >  2:66924/1‑140

                                                                                                             TCTCATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGA                              >  2:439643/1‑140

                                                                                                                 ATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCG                          >  1:267439/1‑140

                                                                                                                 ATATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCG                          >  2:117716/1‑140

                                                                                                                   ATCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCC                        >  2:1033035/1‑140

                                                                                                                    TCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCA                       <  1:1513717/140‑1

                                                                                                                    TCAGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCA                       <  2:1204229/140‑1

                                                                                                                      AGGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAA                     <  1:1185185/140‑1

                                                                                                                       GGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGTGCATGACTCGCCAAAA                    >  1:973883/1‑140

                                                                                                                       GGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAA                    <  1:484464/140‑1

                                                                                                                       GGGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAA                    <  2:955234/140‑1

                                                                                                                        GGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAA                   >  1:1522664/1‑140

                                                                                                                        GGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAA                   >  2:893369/1‑140

                                                                                                                        GGACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAA                   >  1:158520/1‑140

                                                                                                                         GACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAAT                  <  2:1113269/140‑1

                                                                                                                         GACTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAAT                  >  2:501579/1‑140

                                                                                                                           CTTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGT                >  1:32983/1‑140

                                                                                                                            TTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTA               >  2:307698/1‑140

                                                                                                                            TTGTTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTA               >  1:319130/1‑140

                                                                                                                               TTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATAC            <  1:935099/140‑1

                                                                                                                               TTCGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATAC            <  2:876075/140‑1

                                                                                                                                 CGCACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTG          >  1:242955/1‑140

                                                                                                                                   CACCTTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGG        >  1:1293645/1‑140

                                                                                                                                       TTCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAA    >  2:393651/1‑140

                                                                                                                                        TCCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAA   >  2:748864/1‑140

                                                                                                                                         CCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAAA  >  2:602270/1‑140

                                                                                                                                         CCTTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAAA  >  2:430708/1‑140

AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/275011‑275149

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAATGCACTTAAGGGATTATTAACAAATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAAA  >  NC_000913/679481‑679618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A