Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	132	61.4	2079690	99.1%	2060972	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,621,699	A→G	D123G (GAC→GGC)	ydeE →	dipeptide exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,621,699	0	A	G	100.0%	253.8 / NA	67	D123G (GAC→GGC)	ydeE	dipeptide exporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (37/30); total (37/30)

GCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGG  >  NC_000913/1621566‑1621830

gCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCt                                                                                                                               >  2:956478/1‑140 (MQ=255)

gCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCt                                                                                                                               >  2:35899/1‑140 (MQ=255)

gCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCt                                                                                                                               >  2:799266/1‑140 (MQ=255)

gCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTACTGAAAGCCTGGTTTGCCGGCAATCt                                                                                                                               >  2:688016/1‑140 (MQ=255)

gCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTGTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCt                                                                                                                               >  1:822564/1‑140 (MQ=255)

  aaTTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCttt                                                                                                                             >  1:890650/1‑140 (MQ=255)

  aaTTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCttt                                                                                                                             >  2:458815/1‑140 (MQ=255)

              cGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCa                                                                                                                 >  1:836265/1‑140 (MQ=255)

                          tATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAAtct                                                                                                     >  1:959864/1‑140 (MQ=255)

                          tATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCAACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAAtct                                                                                                     <  2:773429/140‑1 (MQ=255)

                           aTTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAAtctt                                                                                                    <  2:337502/140‑1 (MQ=255)

                           aTTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAAtctt                                                                                                    <  1:873958/140‑1 (MQ=255)

                           aTTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAAtctt                                                                                                    <  2:901010/140‑1 (MQ=255)

                               ccATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtca                                                                                                <  1:527918/140‑1 (MQ=255)

                               ccATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtca                                                                                                >  1:942988/1‑140 (MQ=255)

                               ccATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtca                                                                                                <  2:447482/140‑1 (MQ=255)

                               ccATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtca                                                                                                <  2:385129/140‑1 (MQ=255)

                               ccATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtca                                                                                                <  2:609454/140‑1 (MQ=255)

                               ccATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtca                                                                                                <  1:302527/140‑1 (MQ=255)

                                cATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtcaa                                                                                               <  1:956478/140‑1 (MQ=255)

                                 aTTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtcaat                                                                                              <  1:934591/140‑1 (MQ=255)

                                 aTTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtcaat                                                                                              >  1:34176/1‑140 (MQ=255)

                                    aCTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCtcaatcaa                                                                                           >  1:141760/1‑140 (MQ=255)

                                      tttAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACt                                                                                         <  2:890650/140‑1 (MQ=255)

                                         aGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTaca                                                                                      >  1:954173/1‑140 (MQ=255)

                                               tAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGc                                                                                >  1:782040/1‑140 (MQ=255)

                                               tAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGc                                                                                <  1:918191/140‑1 (MQ=255)

                                               tAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGc                                                                                >  2:599846/1‑140 (MQ=255)

                                               tAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGc                                                                                >  2:601486/1‑140 (MQ=255)

                                                aaCGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCt                                                                               <  1:579446/140‑1 (MQ=255)

                                                  cGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTaa                                                                             >  2:109988/1‑140 (MQ=255)

                                                  cGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTaa                                                                             >  2:272508/1‑140 (MQ=255)

                                                  cGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTaa                                                                             >  1:987614/1‑140 (MQ=255)

                                                    tGACGCTGGTTGTACTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAAc                                                                           >  1:426116/1‑140 (MQ=255)

                                                     gACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCCCCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACa                                                                          <  1:490334/140‑1 (MQ=255)

                                                     gACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACa                                                                          <  1:599846/140‑1 (MQ=255)

                                                            gTTGTGCTCTTTTTTGTCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTg                                                                   >  1:35018/1‑140 (MQ=255)

                                                            gTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTg                                                                   >  2:127419/1‑140 (MQ=255)

                                                                 gCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCa                                                              >  1:961332/1‑140 (MQ=255)

                                                                  ctctTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCAt                                                             <  2:418602/140‑1 (MQ=255)

                                                                          tGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTACTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTccgc                                                     <  1:688016/140‑1 (MQ=255)

                                                                            cccTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTccgccg                                                   >  2:879917/1‑140 (MQ=255)

                                                                                  ttAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGc                                             <  1:109988/140‑1 (MQ=255)

                                                                                   tAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCa                                            <  2:959864/140‑1 (MQ=255)

                                                                                   tAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCT‑GACCATCGGTCCGCCGCTCGGCAc                                           <  1:458815/140‑1 (MQ=255)

                                                                                     aCTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACg                                          <  1:841484/140‑1 (MQ=255)

                                                                                       tGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCt                                        <  1:272508/140‑1 (MQ=255)

                                                                                       tGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCt                                        <  2:942988/140‑1 (MQ=255)

                                                                                         cgcCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGt                                      >  1:377248/1‑140 (MQ=255)

                                                                                         cgcCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGt                                      >  2:809498/1‑140 (MQ=255)

                                                                                         cgcCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGt                                      >  1:345795/1‑140 (MQ=255)

                                                                                         cgcCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGt                                      >  2:915406/1‑140 (MQ=255)

                                                                                           ccTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTg                                    >  2:341373/1‑140 (MQ=255)

                                                                                               ttCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTaa                                >  1:778282/1‑140 (MQ=255)

                                                                                               ttCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTaa                                >  2:925314/1‑140 (MQ=255)

                                                                                                 cTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATg                              <  2:943379/140‑1 (MQ=255)

                                                                                                 cTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATg                              <  2:791035/140‑1 (MQ=255)

                                                                                                    tttttGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCag                           >  2:789907/1‑140 (MQ=255)

                                                                                                    tttttGCTACCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCag                           >  1:453385/1‑140 (MQ=255)

                                                                                                            aCCGTGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCaa                   <  2:954173/140‑1 (MQ=255)

                                                                                                                tGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTg               >  2:903192/1‑140 (MQ=255)

                                                                                                                tGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTg               <  2:836265/140‑1 (MQ=255)

                                                                                                                tGCTGAAAGCCTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTg               >  2:1029283/1‑140 (MQ=255)

                                                                                                                          cTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTctggc     >  1:572585/1‑140 (MQ=255)

                                                                                                                          cTGGTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTctggc     <  2:35018/140‑1 (MQ=255)

                                                                                                                            ggTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTctggctg   >  2:913766/1‑140 (MQ=255)

                                                                                                                             gTTTGCCGGCAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTctggctgg  <  2:961332/140‑1 (MQ=255)

GCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGG  >  NC_000913/1621566‑1621830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A